CSPI01G04480 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G04480
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	MAR-binding filament-like protein 1-1 isoform 1
Location	Chr1 : 2808542 .. 2813273 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTCCACAAGCTAAGGTTGAGCTATGAACCAATCATCCGTTGCATCTTCTTAACTAATTTCATCCGTTCCACCTTCGAATCTTCACATTATTCCTCTTCTTCCTCCTCCTGCAGTTGGATTGATCAATTTCCTGCAACCACTCCTCTTCTGATACGTGACAAGCGTTCCGGTTTGTCCTCATAAAATCGGCAGTTGGCCGCGGTTATCTTTACTTTACTGCTTCATCCCATTCATGTCTCCTCCTCCATTTATAATGTTTTTATCTGGAAAATGATGCAGGAATGGCTGTTTTTACTCTTGGATGCTCCAATTCCAGAATTTTTTCTGAAAGGGAAGGGACCTTGTTTTTAGGTATTTCGGCAGCTCCTGTTTTGCCACAGAGTGCGAGAGTTTACGGACATTTTGCGAGAGGTTAGTCAATTTTAGGTGTCTTTTAATTGGAAGATGTAATAGCTGTGGATTGTTTATTATGCAATATGCATTTATATAACCTTAAGTTCGTGCAATTTGAAATGGTTTGTTTGCTTGTATTTTGCAATTTGGATGATATTTGTTAGATAACATAATATTAAATTTGTTTTGCCGATTATGTTAAGTTATTGGGTCAATATGTGATCCAAGATGATGTTATAGCAGTTAGTTAAGTTATTTTGTTCACAAACTCTTGCCATGTTATTTTTCATCTCAATTAATGCTGATTTTCATTTGTTGGATCTTTCACAAACAATATAATATTAAAATTGTCCGCTTATGTTTTTGGGTTAATGGGTGATTTAAAAGTATTGGAAAATTTTGAGGTGAGTTGAATTTGCCTTGCATTATTTACCAATAATGCTGTCAGTTGAGCAATGTAGAGAAAGAGAGAGTCTCACAAGTTATAGTATTACTTTAAACACTAGTTGGTGGAAAAATAATAGTGAATAATTTAGATTGTTTGTTAATTTTTTCTCAAAATGACAACTCCCAATAGACTTGTAAATTCAGTTTGTACGAAGGCAAATCGAGATGTACGTTTAGCTAAAACTTGCCCCATGCAGAAATGCTATATTGTTATGGACATGATTTTGAGAAACAGCTAACTATATCTTTAATACATATTCTAACAACTCATGTTTTTAAGTCAATAATCCCCTGGAACCACCCTGTAAAGTTGATTTATGCAGTTTGAAGAGTGTTGGTGCACGCCATCCGGTTTTTCTTATGAAAAAAAAGAGGAGAGATTTGTTATAAATTACAAGCAAGCGAAGATGGTTTTTTTTTCCTGTTTGGCTTGGGGAGATTATACTACATGAGCTCATGTTGGTATCATGGTTAAACTTCAATAGGACTTTCATTTGGTTGAAGTGGTTCGAGAGGATTGTCGTATCTTTTACGAGAACTCAACAAGGCATTGGATTTTGAGTCCTTTGATCATTTATCTTTTTATTGTCCTTACTTGGTTTTAATTCTCCTCTTTTTTAATTGCTATAGCTATAAAACTCTCATCACCCGCTATCCATTGGAACTGTTTTTAGTAATCCCTTGGCTCTCTGGACTTCTGCACTTCTGTAATTTTCATTTTTTCAATTTAATTATAGTATGTCTATTTCTATTAAAAAGCGGATCATGATGGATACCTTAAGAAATATGTATTAGACTACTGGCATTTCTTCGGCCATTTTTTTTATCTTCATAATTTCTGGGTTTATTATTTTCCACCTTGCCCAATTCTGTGGCAGTTAATTATTACAACTGGCTTAGATGAAAAAGAAATAATAATAATAATTATAAAAAGTTTCCAGTTGGAACCTAAACAAGCAATGCTTGAAAACCTCTACGGTGATAATTGAAAATCCTTCGACCCCGATACTTTTATTTGTTACTGATTTTTACACGTTAAGCACAAACAGCATTTAGATTGTGTTCAACTTTTCCACCAACAGCATCCGAATTTAGAATTTGGTTTTCCTTGGAATTTTCCTTATCCAAATATTGCTTGATAGGTAACTGTTAGGTTTTAGATCAGAGACTGAAATAACGTTGGGGTTGGGATTTGCAAGAGATCTCTCCTGTGTTTTCATATCGTCGTACTCTTTTATCTTTGACCTTATAACCTATGAGGTTTCAGAAGCTAGTCCTTCCCTGAAAATTTGTTAAAGCTCAAATTCTCTTAATTTAGAGTTTTTTTGTAAAGAGTTTATATTTTATGTGCTTGCCTCAACAATCATTACCTTTTCAGTTCTTATTTATTCTGAATAAGAATACAAAGGGCTAGAAGGCAGCTGCAATTTATTGCTTTCTACCTAAGTTTCTTCCCTATTTTGAATTTTTCACCACGTCCTGCCTCAAAAATGAGATGTGAATCAAGCAGATACTCGCTCTTTCTCATTATTGTTTTACTCATATTTCTGGAGACTTGTAAATTATTCCCCCCCCCCAAAAAAAAAACTGGATATAGATGTTTCAAGTGTAATCTTTTCATATCAATAAGACCAGCATTTCAAGTTGATTGTGACCATTTAAGTTGATCTGCCACAAGAGGCTATTCATTTATCATATGATAACTAGATATTTTTCTTCAGAGAGAGGAACTAGTCGACGGTTGTCAAAAAAGGAACAAATTGATTTCCCAAGGAAAGGATTTTTTGGCACAAGGAAAGTTGTCCTCACAGTCCCTAAGGACAGTAGTTCTTCAAACACAAGCAGCAGCAATGACGACTCTACAAATCAAACCGAGGCAAGTTGTGTTCTTTTCCTTCTGAGTAGATGGTGAATGCATTTGTAGAATGCTAAATTCAGCTGATTTACACGATTTATATGCAGTTTTTTGTACCTACAAAGCATAAGTGTAATGATGTTTCCCGAGAGATTTATTGACTCGTGGCAACAATGATATATTGGCTTAAGTTACACTTTTAGGTTTCTTCTGCACCTTTCCGTTATAGAGCAACATTCGTTGAGGACCTAGACATAGCTTAAGTGAAATTCGAACATGTCCTCAATCAATGGTAGATGGAAAGGCACCGCTTTAGATTTTTTTTTTTTTTTTTGTGAACTTGTGCGCTTTACCATTGTATTATAAGATACAGCTCAGACGGTTATGCCCATCTTGGGGGTTCAGAATAATAATGTTTGGTTTAGCATTAATCTTTATTTGAATTGTTTGGTTTTGCATTAATTTGAGCCTTACAGCTAGACATTATCATTGGGGATTATCAGTAAATGCAAATAAGTTCTGTTTCACTTTTTTTTCCTGCAGCAAACACCTTTTGGTTACACGAGGAAGGATGTTTTATTAATTGGTTTAGGTGTCACAGTTCTTGGATTTGGATTGAAAAGTGGATTAGAGGTAAGATATTTCACATTTCCTTTAATTAGTAATTGTTCCTCCCACAAGCAATCATTTGTATTCATAGAATGCCAAAGTGGGACTTTCACCCCATCTCTTGTGTACTTCGTTAATTTTCTGGCTATTTGTTCATAATACAAGCGGACGAGACCAAGTTTTCAGTTCATTGTAGTTTTTGTTGCGTAGAATTCATGCTGTAATGCATTTTTTCCCTGTCCTGGCGTCTTGTGCAGTATGCTGGATATGATCCTATGCAAGCAGGTAACGTCGTTCAGCTTGTTCTAGTTTTGGGTTTAACGCTAGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGACATGACATATGCTCAACAACTACGTGACTATGAAGACAAAGTCATGCAGGTATAACGTGATATATCATAATGAAGGTTTATAAAGAGAAACCTCTACTCCAAATTTTCATGTTTAGTCAATGTTTGAGAAACCTCTACTCCAAATTTTCATGTTTAGTAAGGAGATCCATTGATATGAGCATGGAAGAACCAAACATTAAAATGAGGTTAAAGAACACTTTTTATCGTTGAATTTTCATGAAAACAATAATTTAGTCCATGAACTATATATGGTAATGATTAAGTTCATGTACTTAAATTTGTAACAATTTAGTTTCTAACAATTCAATCTCTAATTCCTATCATAAAAATCTCATGAAAATGTGTTTGATTGTTTTACGTAATAACTCGTAATATATTATTTATAAAAACTATTGATCTCATATTATTTTATTGTTCTACATGTATAAAAAAATTCATAATAGGGTAGAAAAAGTAAGTAGTTCCCTACTAAAATTCAGTGACCAAAGTTTTTGTTAAGCATAGAATAATTGCCACAGAATTTCTCTTTTGCTCTTGATACATTATTTTGTACTTTCTTACAGCTATCTAAAATGCATTATTTAAGGAGCAGGGTCTTGTGCATAGTATTCTATATAGGATTAGTTTATTGTTCTACATGGCAGTTTTTCTCTCGTTAGTTTGCAATAACTCTATTACCATCCTTCTTATCAATTTACTCTCTGTAGAAACGCCTTGAAAGCCTTACAGAAGCAGAGCTCGTAGCATTACTCGAACAAGTCGAGGAAGAAAAGAGTCAATCAGCAAGCAGCGAGCAGGTTAATTGAAGTCATTTCTATACCTGTTTTTTAGAAGTTCTCGGACTAGAAATTGAGGAGCAGGGTCTTGTGCATAGTATTCTATATGGGAACAGTGTAGAATAAGTTTGAGTAGCTTAAATAATGCATTTTAGTAATCTATTCTTAGGATAATAAATCAAAACTACCTTATGACAAATATTCTTTAAACTATTTTTTTTAGTACAAATAGGAAATGAGAGATTAAACTTCTTACGCATGGG

mRNA sequence

ATGGCTGTTTTTACTCTTGGATGCTCCAATTCCAGAATTTTTTCTGAAAGGGAAGGGACCTTGTTTTTAGGTATTTCGGCAGCTCCTGTTTTGCCACAGAGTGCGAGAGTTTACGGACATTTTGCGAGAGAGAGAGGAACTAGTCGACGGTTGTCAAAAAAGGAACAAATTGATTTCCCAAGGAAAGGATTTTTTGGCACAAGGAAAGTTGTCCTCACAGTCCCTAAGGACAGTAGTTCTTCAAACACAAGCAGCAGCAATGACGACTCTACAAATCAAACCGAGCAAACACCTTTTGGTTACACGAGGAAGGATGTTTTATTAATTGGTTTAGGTGTCACAGTTCTTGGATTTGGATTGAAAAGTGGATTAGAGTATGCTGGATATGATCCTATGCAAGCAGGTAACGTCGTTCAGCTTGTTCTAGTTTTGGGTTTAACGCTAGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGACATGACATATGCTCAACAACTACGTGACTATGAAGACAAAGTCATGCAGAAACGCCTTGAAAGCCTTACAGAAGCAGAGCTCGTAGCATTACTCGAACAAGTCGAGGAAGAAAAGAGTCAATCAGCAAGCAGCGAGCAGGTTAATTGA

Coding sequence (CDS)

ATGGCTGTTTTTACTCTTGGATGCTCCAATTCCAGAATTTTTTCTGAAAGGGAAGGGACCTTGTTTTTAGGTATTTCGGCAGCTCCTGTTTTGCCACAGAGTGCGAGAGTTTACGGACATTTTGCGAGAGAGAGAGGAACTAGTCGACGGTTGTCAAAAAAGGAACAAATTGATTTCCCAAGGAAAGGATTTTTTGGCACAAGGAAAGTTGTCCTCACAGTCCCTAAGGACAGTAGTTCTTCAAACACAAGCAGCAGCAATGACGACTCTACAAATCAAACCGAGCAAACACCTTTTGGTTACACGAGGAAGGATGTTTTATTAATTGGTTTAGGTGTCACAGTTCTTGGATTTGGATTGAAAAGTGGATTAGAGTATGCTGGATATGATCCTATGCAAGCAGGTAACGTCGTTCAGCTTGTTCTAGTTTTGGGTTTAACGCTAGGATGGATTTCCACGTACATGTTCAGAGTTTCAAGCAAGGACATGACATATGCTCAACAACTACGTGACTATGAAGACAAAGTCATGCAGAAACGCCTTGAAAGCCTTACAGAAGCAGAGCTCGTAGCATTACTCGAACAAGTCGAGGAAGAAAAGAGTCAATCAGCAAGCAGCGAGCAGGTTAATTGA

Homology

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BLAST of CSPI01G04480 vs. TrEMBL
Match: A0A0A0LPZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025200 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.0e-108
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


Query: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60
           MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP
Sbjct: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60

Query: 61  RKGFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGL 120
           RKGFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGL
Sbjct: 61  RKGFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGL 120

Query: 121 KSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR 180
           KSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR
Sbjct: 121 KSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR 180

Query: 181 LESLTEAELVALLEQVEEEKSQSASSEQVN 211
           LESLTEAELVALLEQVEEEKSQSASSEQVN
Sbjct: 181 LESLTEAELVALLEQVEEEKSQSASSEQVN 210

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BLAST of CSPI01G04480 vs. TrEMBL
Match: D7SJD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g02160 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.1e-57
Identity = 133/212 (62.74%), Postives = 152/212 (71.70%), Query Frame = 1


Query: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60
           MA   L   N  IF ER     +G+SA P+L Q  R  G   R    S+    KE   FP
Sbjct: 1   MASLPLKSPNCSIFCERGSISIMGVSALPLLQQRVRAVGGLMRGSIISQSAYTKETSTFP 60

Query: 61  RKGFFGT--RKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGF 120
           RKG      +K+V T P+ S SSN+  S DDSTNQ ++ PFGY RKDVLLIG+GVTVLG 
Sbjct: 61  RKGSNSMIPKKLVFT-PRSSGSSNSDGSKDDSTNQ-DKVPFGYNRKDVLLIGVGVTVLGI 120

Query: 121 GLKSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQ 180
           GLKSGLE+ G DP+QAGNVVQLVLVLGLT+GWISTY+FRVS+K+MTYAQQLRDYE+KVMQ
Sbjct: 121 GLKSGLEFVGVDPLQAGNVVQLVLVLGLTIGWISTYIFRVSNKEMTYAQQLRDYENKVMQ 180

Query: 181 KRLESLTEAELVALLEQVEEEKSQSASSEQVN 211
           KRLE LTEAEL  LLEQVEEEK +  S EQVN
Sbjct: 181 KRLEGLTEAELEVLLEQVEEEKRRLVSGEQVN 210

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BLAST of CSPI01G04480 vs. TrEMBL
Match: A0A067JQ10_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22702 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.1e-53
Identity = 124/213 (58.22%), Postives = 154/213 (72.30%), Query Frame = 1


Query: 1   MAVFTLGCSNSRIFSEREGTLFLGISAA-PVLPQSARVYGHFARERGTSRRLSKKEQIDF 60
           M     G  N  I  +  G  ++GIS   P+L   A  Y  +      S+ L+++E   F
Sbjct: 1   MTPLLYGNPNCNILYKLGGISYVGISTTIPLLQLGAGNYHGYMAGMHISQSLNRRETFSF 60

Query: 61  PRK--GFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLG 120
           PRK      ++KV    P+  SSS++SS+ +DS++Q + TPFGY RKDVLLIGLGVTVLG
Sbjct: 61  PRKESNSLISKKVNFITPRSGSSSDSSSNENDSSDQGK-TPFGYNRKDVLLIGLGVTVLG 120

Query: 121 FGLKSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVM 180
            GLKSGLE+AG DP+QAGNVVQLVLVLGLT+GWISTY+FRVS+K+MTYAQQLRDYEDKVM
Sbjct: 121 IGLKSGLEFAGVDPLQAGNVVQLVLVLGLTVGWISTYIFRVSNKEMTYAQQLRDYEDKVM 180

Query: 181 QKRLESLTEAELVALLEQVEEEKSQSASSEQVN 211
           QKR+E LTEAEL ALLEQVEEEK +  S +++N
Sbjct: 181 QKRIEGLTEAELEALLEQVEEEKRRLGSGDKIN 212

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BLAST of CSPI01G04480 vs. TrEMBL
Match: U5FLG8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04810g PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.0e-51
Identity = 122/206 (59.22%), Postives = 147/206 (71.36%), Query Frame = 1


Query: 7   GCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFPRKGFFG 66
           G  N  I      T F+G SA P +   A   G F R R   + L +KE+  FPRKG   
Sbjct: 11  GNPNCSILRNNGATSFVGFSALPFMQLRA---GAFMRGRLIPQSLYRKEKFCFPRKGLGS 70

Query: 67  --TRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 126
             ++KV  T         T SS++D ++   +TPFGY RKDVLLIGLGVT+LG GL+SGL
Sbjct: 71  MMSKKVTFT---------TRSSSEDGSSDQGKTPFGYNRKDVLLIGLGVTLLGIGLESGL 130

Query: 127 EYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 186
           EYAG DP+QAGNVVQLVLVLGLT+GWISTY+FRVS+K+MTYAQQLRDYE+KVM+KRLE L
Sbjct: 131 EYAGVDPLQAGNVVQLVLVLGLTVGWISTYIFRVSNKEMTYAQQLRDYENKVMEKRLEGL 190

Query: 187 TEAELVALLEQVEEEKSQSASSEQVN 211
           +EAEL ALLEQVEEEK + AS E++N
Sbjct: 191 SEAELEALLEQVEEEKRRQASGEKIN 204

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BLAST of CSPI01G04480 vs. TrEMBL
Match: A9PID9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-51
Identity = 121/206 (58.74%), Postives = 147/206 (71.36%), Query Frame = 1


Query: 7   GCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFPRKGFFG 66
           G  N  I      T F+G SA P +   A   G F R R   + L +KE+  FPRKG   
Sbjct: 11  GNPNCSILRNNGATSFVGFSALPFMQLRA---GAFMRGRLIPQSLYRKEKFCFPRKGLGS 70

Query: 67  --TRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGLKSGL 126
             ++KV  T         T SS++D ++   +TPFGY RKDVLLIGLGVT+LG GL+SGL
Sbjct: 71  MMSKKVTFT---------TRSSSEDGSSDQGKTPFGYNRKDVLLIGLGVTLLGIGLESGL 130

Query: 127 EYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESL 186
           EYAG DP+QAGNVVQLVLVLGLT+GWISTY+FRVS+K+MTYAQQLRDYE+KVM+KRLE L
Sbjct: 131 EYAGVDPLQAGNVVQLVLVLGLTVGWISTYIFRVSNKEMTYAQQLRDYENKVMEKRLEGL 190

Query: 187 TEAELVALLEQVEEEKSQSASSEQVN 211
           +EAEL ALLE+VEEEK + AS E++N
Sbjct: 191 SEAELEALLERVEEEKRRQASGEKIN 204

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BLAST of CSPI01G04480 vs. TAIR10
Match: AT3G17930.1 (AT3G17930.1 unknown protein)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-45
Identity = 90/123 (73.17%), Postives = 109/123 (88.62%), Query Frame = 1


Query: 80  SSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGLKSGLEYAGYDPMQAGNVVQ 139
           SSN++ + DDS  +T+ TPFGYTRKDV+LIG+GVT LG GL+SGLEY G DP+QAGN VQ
Sbjct: 66  SSNSTETEDDSATKTKTTPFGYTRKDVILIGVGVTALGIGLESGLEYVGVDPLQAGNAVQ 125

Query: 140 LVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKRLESLTEAELVALLEQVEEE 199
           L+LVLGLTLGWISTY+FRV +K+MTYAQQLRDYE +VMQKRLESL+EAEL AL+ QV+EE
Sbjct: 126 LILVLGLTLGWISTYIFRVGNKEMTYAQQLRDYESQVMQKRLESLSEAELEALMAQVDEE 185

Query: 200 KSQ 203
           K++
Sbjct: 186 KTK 188

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BLAST of CSPI01G04480 vs. NCBI nr
Match: gi|449439160|ref|XP_004137355.1| (PREDICTED: uncharacterized protein LOC101203378 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 2.9e-108
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1


Query: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60
           MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP
Sbjct: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60

Query: 61  RKGFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGL 120
           RKGFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGL
Sbjct: 61  RKGFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGL 120

Query: 121 KSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR 180
           KSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR
Sbjct: 121 KSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR 180

Query: 181 LESLTEAELVALLEQVEEEKSQSASSEQVN 211
           LESLTEAELVALLEQVEEEKSQSASSEQVN
Sbjct: 181 LESLTEAELVALLEQVEEEKSQSASSEQVN 210

[Close]

BLAST of CSPI01G04480 vs. NCBI nr
Match: gi|659107026|ref|XP_008453500.1| (PREDICTED: uncharacterized protein LOC103494194 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 1.8e-102
Identity = 201/210 (95.71%), Postives = 204/210 (97.14%), Query Frame = 1


Query: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60
           MAVFT GCSN RIFSEREGTLFLGISAAPVLPQSARVYG FARERGTSRRLSKKEQ+DFP
Sbjct: 1   MAVFTHGCSNFRIFSEREGTLFLGISAAPVLPQSARVYGQFARERGTSRRLSKKEQLDFP 60

Query: 61  RKGFFGTRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGFGL 120
           RKGFF TRKVVLTVPKDSSSSNTSSSN+D TNQ+EQTPFGYTRKDVLLIGLGVTVLGFGL
Sbjct: 61  RKGFFATRKVVLTVPKDSSSSNTSSSNEDPTNQSEQTPFGYTRKDVLLIGLGVTVLGFGL 120

Query: 121 KSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR 180
           KSGLEYAGYD MQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR
Sbjct: 121 KSGLEYAGYDSMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQKR 180

Query: 181 LESLTEAELVALLEQVEEEKSQSASSEQVN 211
           LESLTEAELVALLEQVEEEKSQSASSEQVN
Sbjct: 181 LESLTEAELVALLEQVEEEKSQSASSEQVN 210

[Close]

BLAST of CSPI01G04480 vs. NCBI nr
Match: gi|731426675|ref|XP_010663693.1| (PREDICTED: uncharacterized protein LOC100245848 [Vitis vinifera])

HSP 1 Score: 230.3 bits (586), Expect = 3.1e-57
Identity = 133/212 (62.74%), Postives = 152/212 (71.70%), Query Frame = 1


Query: 1   MAVFTLGCSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDFP 60
           MA   L   N  IF ER     +G+SA P+L Q  R  G   R    S+    KE   FP
Sbjct: 1   MASLPLKSPNCSIFCERGSISIMGVSALPLLQQRVRAVGGLMRGSIISQSAYTKETSTFP 60

Query: 61  RKGFFGT--RKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLGF 120
           RKG      +K+V T P+ S SSN+  S DDSTNQ ++ PFGY RKDVLLIG+GVTVLG 
Sbjct: 61  RKGSNSMIPKKLVFT-PRSSGSSNSDGSKDDSTNQ-DKVPFGYNRKDVLLIGVGVTVLGI 120

Query: 121 GLKSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVMQ 180
           GLKSGLE+ G DP+QAGNVVQLVLVLGLT+GWISTY+FRVS+K+MTYAQQLRDYE+KVMQ
Sbjct: 121 GLKSGLEFVGVDPLQAGNVVQLVLVLGLTIGWISTYIFRVSNKEMTYAQQLRDYENKVMQ 180

Query: 181 KRLESLTEAELVALLEQVEEEKSQSASSEQVN 211
           KRLE LTEAEL  LLEQVEEEK +  S EQVN
Sbjct: 181 KRLEGLTEAELEVLLEQVEEEKRRLVSGEQVN 210

[Close]

BLAST of CSPI01G04480 vs. NCBI nr
Match: gi|1009131173|ref|XP_015882697.1| (PREDICTED: uncharacterized protein LOC107418510 isoform X3 [Ziziphus jujuba])

HSP 1 Score: 228.8 bits (582), Expect = 8.9e-57
Identity = 127/213 (59.62%), Postives = 159/213 (74.65%), Query Frame = 1


Query: 1   MAVFTLG-CSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDF 60
           MA+ T G  +N+ I  E+  T  +GI A P L   AR +    R     +    K    F
Sbjct: 1   MAIVTPGNITNAGILCEKGVTSSVGILALPHLRARARAFDGLVRGNAVCQSFYMKTAFPF 60

Query: 61  PRKGFFG--TRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLG 120
             +G  G  +++V+ T+P+ S+SSN+S S DDS++Q +QTPFGY+RKDVLLIG+GVTV+G
Sbjct: 61  QPRGSEGITSKRVIYTIPRSSNSSNSSDSKDDSSDQAKQTPFGYSRKDVLLIGVGVTVIG 120

Query: 121 FGLKSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVM 180
            GLKSGLE+AG DP+QAGNVVQLVLVLGLT+GWISTY+FRVS+K+MTYAQQLRDYE+KVM
Sbjct: 121 IGLKSGLEFAGVDPLQAGNVVQLVLVLGLTIGWISTYIFRVSNKEMTYAQQLRDYENKVM 180

Query: 181 QKRLESLTEAELVALLEQVEEEKSQSASSEQVN 211
           +KRLE L+EAEL ALLEQVEEEK +  S EQVN
Sbjct: 181 EKRLEGLSEAELEALLEQVEEEKRRLTSGEQVN 213

[Close]

BLAST of CSPI01G04480 vs. NCBI nr
Match: gi|1009131169|ref|XP_015882695.1| (PREDICTED: uncharacterized protein LOC107418510 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 228.8 bits (582), Expect = 8.9e-57
Identity = 127/213 (59.62%), Postives = 159/213 (74.65%), Query Frame = 1


Query: 1   MAVFTLG-CSNSRIFSEREGTLFLGISAAPVLPQSARVYGHFARERGTSRRLSKKEQIDF 60
           MA+ T G  +N+ I  E+  T  +GI A P L   AR +    R     +    K    F
Sbjct: 6   MAIVTPGNITNAGILCEKGVTSSVGILALPHLRARARAFDGLVRGNAVCQSFYMKTAFPF 65

Query: 61  PRKGFFG--TRKVVLTVPKDSSSSNTSSSNDDSTNQTEQTPFGYTRKDVLLIGLGVTVLG 120
             +G  G  +++V+ T+P+ S+SSN+S S DDS++Q +QTPFGY+RKDVLLIG+GVTV+G
Sbjct: 66  QPRGSEGITSKRVIYTIPRSSNSSNSSDSKDDSSDQAKQTPFGYSRKDVLLIGVGVTVIG 125

Query: 121 FGLKSGLEYAGYDPMQAGNVVQLVLVLGLTLGWISTYMFRVSSKDMTYAQQLRDYEDKVM 180
            GLKSGLE+AG DP+QAGNVVQLVLVLGLT+GWISTY+FRVS+K+MTYAQQLRDYE+KVM
Sbjct: 126 IGLKSGLEFAGVDPLQAGNVVQLVLVLGLTIGWISTYIFRVSNKEMTYAQQLRDYENKVM 185

Query: 181 QKRLESLTEAELVALLEQVEEEKSQSASSEQVN 211
           +KRLE L+EAEL ALLEQVEEEK +  S EQVN
Sbjct: 186 EKRLEGLSEAELEALLEQVEEEKRRLTSGEQVN 218

The following BLAST results are available for this feature:

BLAST of CSPI01G04480 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G04480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPZ9_CUCSA	2.0e-108	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025200 PE=4 SV=1	[more]
D7SJD3_VITVI	2.1e-57	62.74	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g02160 PE=4 SV=...	[more]
A0A067JQ10_JATCU	7.1e-53	58.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22702 PE=4 SV=1	[more]
U5FLG8_POPTR	1.0e-51	59.22	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s04810g PE=4 SV=1	[more]
A9PID9_POPTR	3.0e-51	58.74	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]

BLAST of CSPI01G04480 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17930.1	1.3e-45	73.17	unknown protein	[more]

BLAST of CSPI01G04480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439160\|ref\|XP_004137355.1\|	2.9e-108	100.00	PREDICTED: uncharacterized protein LOC101203378 [Cucumis sativus]	[more]
gi\|659107026\|ref\|XP_008453500.1\|	1.8e-102	95.71	PREDICTED: uncharacterized protein LOC103494194 [Cucumis melo]	[more]
gi\|731426675\|ref\|XP_010663693.1\|	3.1e-57	62.74	PREDICTED: uncharacterized protein LOC100245848 [Vitis vinifera]	[more]
gi\|1009131173\|ref\|XP_015882697.1\|	8.9e-57	59.62	PREDICTED: uncharacterized protein LOC107418510 isoform X3 [Ziziphus jujuba]	[more]
gi\|1009131169\|ref\|XP_015882695.1\|	8.9e-57	59.62	PREDICTED: uncharacterized protein LOC107418510 isoform X1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021562	DUF3007

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016043	cellular component organization
biological_process	GO:0010190	cytochrome b6f complex assembly
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0006281	DNA repair
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0008278	cohesin complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000785	chromatin
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G04480.1	CSPI01G04480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021562	Protein of unknown function DUF3007	PFAM	PF11460	DUF3007	coord: 102..197 score: 1.4
None	No IPR available	PANTHER	PTHR35734	FAMILY NOT NAMED	coord: 1..210 score: 5.3
None	No IPR available	PANTHER	PTHR35734:SF1	SUBFAMILY NOT NAMED	coord: 1..210 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G04480	Cla018911	Watermelon (97103) v1	cpiwmB100
CSPI01G04480	Csa1G025200	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G04480	MELO3C017374	Melon (DHL92) v3.5.1	cpimeB056
CSPI01G04480	ClCG06G014200	Watermelon (Charleston Gray)	cpiwcgB084
CSPI01G04480	Lsi06G012680	Bottle gourd (USVL1VR-Ls)	cpilsiB071
CSPI01G04480	MELO3C017374.2	Melon (DHL92) v3.6.1	cpimedB050
CSPI01G04480	CsaV3_1G004470	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G04480	Cla97C06G123660	Watermelon (97103) v2	cpiwmbB080
CSPI01G04480	Bhi02G000114	Wax gourd	cpiwgoB079
CSPI01G04480	Cucsa.111690	Cucumber (Gy14) v1	cgycpiB137
CSPI01G04480	CmaCh11G003200	Cucurbita maxima (Rimu)	cmacpiB086
CSPI01G04480	CmaCh10G003350	Cucurbita maxima (Rimu)	cmacpiB051
CSPI01G04480	CmoCh10G003630	Cucurbita moschata (Rifu)	cmocpiB042
CSPI01G04480	CmoCh11G003250	Cucurbita moschata (Rifu)	cmocpiB079
CSPI01G04480	Cp4.1LG04g13720	Cucurbita pepo (Zucchini)	cpecpiB657
CSPI01G04480	Cp4.1LG18g06720	Cucurbita pepo (Zucchini)	cpecpiB363
CSPI01G04480	CsGy1G004380	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G04480	Carg15185	Silver-seed gourd	carcpiB0821
CSPI01G04480	Carg09094	Silver-seed gourd	carcpiB0628

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None