CSPI01G04060 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTGAGTATGATGTAGATGCAGAGTTCTGCTCCCTCACAAAGAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCAAAGGTAATGTTTCCATCAAGTGGGTATCTCATCTATGGAGTGGCTAGCCAACATATTGGTGCAACTGGTGCAGCATTTTATGGACAGGTAATAAACTTAACTATTATGTTTATATATTTGCTCTTGCATTCATTAGCACTTCGTTTCTAGTTTTTTGTTTCTGAAAATGGACAGACCTTAGATAATTAGCCTTGATATAAACGCTATGTTCTTATCAGGATGGAAGAGTTCTGTGCTCTTCATCTCCAATTTATGGCGAAGGAAATGAAGAAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCACGATCAACAAAGGAGAAATGGTAACTTTTGTATCCAATTATAGTTCTACATTGACCCACAGAGGAGTTCGGGGTATCTTTCACATTATTGTTGCTGTAAAATAAAATCATCATCAACACTTCCGGAAAAAGCTGGCAATGACAGCACCATCGTCATGTAA ATTGAGTATGATGTAGATGCAGAGTTCTGCTCCCTCACAAAGAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCAAAGGTAATGTTTCCATCAAGTGGGTATCTCATCTATGGAGTGGCTAGCCAACATATTGGTGCAACTGGTGCAGCATTTTATGGACAGGATGGAAGAGTTCTGTGCTCTTCATCTCCAATTTATGGCGAAGGAAATGAAGAAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCACGATCAACAAAGGAGAAATGAGGAGTTCGGGGTATCTTTCACATTATTGTTGCTGTAAAATAAAATCATCATCAACACTTCCGGAAAAAGCTGGCAATGACAGCACCATCGTCATGTAA ATTGAGTATGATGTAGATGCAGAGTTCTGCTCCCTCACAAAGAAGCTTGATGATGATAAATGTAATGCTGTGAAAAAGTCAAAGGTAATGTTTCCATCAAGTGGGTATCTCATCTATGGAGTGGCTAGCCAACATATTGGTGCAACTGGTGCAGCATTTTATGGACAGGATGGAAGAGTTCTGTGCTCTTCATCTCCAATTTATGGCGAAGGAAATGAAGAAGGATATGTGATTGGAATGACAACTTGTTATCCAAAGCCAGGTTCAATCACGATCAACAAAGGAGAAATGAGGAGTTCGGGGTATCTTTCACATTATTGTTGCTGTAAAATAAAATCATCATCAACACTTCCGGAAAAAGCTGGCAATGACAGCACCATCGTCATGTAA
BLAST of CSPI01G04060 vs. TrEMBL
Match: A0A0A0LS56_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024275 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 3.2e-48 Identity = 104/144 (72.22%), Postives = 111/144 (77.08%), Query Frame = 1
BLAST of CSPI01G04060 vs. TrEMBL
Match: A0A0A0K2U1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G069440 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.6e-24 Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 1
BLAST of CSPI01G04060 vs. TrEMBL
Match: W9RAG4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011610 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.6e-23 Identity = 54/100 (54.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CSPI01G04060 vs. TrEMBL
Match: W9RA86_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011609 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.1e-23 Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 1
BLAST of CSPI01G04060 vs. TrEMBL
Match: W9RZ49_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011611 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 3.6e-23 Identity = 53/100 (53.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CSPI01G04060 vs. TAIR10
Match: AT5G61820.1 (AT5G61820.1 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 80.5 bits (197), Expect = 8.5e-16 Identity = 35/75 (46.67%), Postives = 48/75 (64.00%), Query Frame = 1
BLAST of CSPI01G04060 vs. NCBI nr
Match: gi|778664733|ref|XP_011660342.1| (PREDICTED: uncharacterized protein LOC105436375 [Cucumis sativus]) HSP 1 Score: 232.3 bits (591), Expect = 4.9e-58 Identity = 120/143 (83.92%), Postives = 121/143 (84.62%), Query Frame = 1
BLAST of CSPI01G04060 vs. NCBI nr
Match: gi|700208748|gb|KGN63844.1| (hypothetical protein Csa_1G024275 [Cucumis sativus]) HSP 1 Score: 199.1 bits (505), Expect = 4.6e-48 Identity = 104/144 (72.22%), Postives = 111/144 (77.08%), Query Frame = 1
BLAST of CSPI01G04060 vs. NCBI nr
Match: gi|778656401|ref|XP_011648993.1| (PREDICTED: uncharacterized protein LOC101210584 [Cucumis sativus]) HSP 1 Score: 199.1 bits (505), Expect = 4.6e-48 Identity = 104/144 (72.22%), Postives = 111/144 (77.08%), Query Frame = 1
BLAST of CSPI01G04060 vs. NCBI nr
Match: gi|659106805|ref|XP_008453443.1| (PREDICTED: uncharacterized protein LOC103494148 [Cucumis melo]) HSP 1 Score: 196.1 bits (497), Expect = 3.9e-47 Identity = 101/145 (69.66%), Postives = 113/145 (77.93%), Query Frame = 1
BLAST of CSPI01G04060 vs. NCBI nr
Match: gi|659106797|ref|XP_008453441.1| (PREDICTED: uncharacterized protein LOC103494146 [Cucumis melo]) HSP 1 Score: 192.6 bits (488), Expect = 4.3e-46 Identity = 97/146 (66.44%), Postives = 112/146 (76.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |