CSPI01G03920 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTAAAAATAAAGAAAAGAAAAAAAAGTTGACTCCGGTTCGAGATGAAGTCCCCAATGGTCTCCTCCGTCCTTCATTCGTCGTCGGAATTGCTTATCTTCTCTCTTCTTCTTCACCTCCTCTTTCCGACGGCCTATCACTGATTGGAATCCACACTCTCTCCTTCACCGAGCGTCCAACTAAACCGCATTTTCACTTTAATCTTTACTCTTTTTTGTAGATCTCAGTCTTTGAGTTAAGCGAGTGAAGATTAATTATCGAAGACGAATCAGGCGAGCCGAGTTTCGGATTTCTCTTGATTAGTTGAATTCTTGTGAATTCATCAAAATGAAACCTAATTGGGAGCTTAAGCACTGCTGCAATCACGAGCAAGTTGTGTTTCTGATCACCGTTTCTGTTTGTACTGTTGTTATATTAGCGGTATCTCTCTTAATTCACCCATACTATTTCTTCATTTCTAATTATTAGACCGATTGAACTATTTGAATTGTTTATAAGAAGTCAGTGTTTGTTTAAACTGGAAAGTTGAAAAATACTTTATTAGCTTTTTATTTCAGTAACCTGTTGAATTTTAATGATCAACTTAAAATTTTCATTTCAAAAGTAGTGTTCTCGTATTTTATTTCATTACTGAGGTTAGCTCTGAATCAGTTTGTTTCTTTTAGCTCTGGAGGACGATACTGCTGAAACCATTCAAACTTGTCACCGTGTTTCTTCACGAGGCCAGCCATGCCATTGTTTGCAAGCTTACCTGTGGTCATGTAAGATGTTAAATGAATATTGTTTGTCTTTCCTTTATCATGTCAATTTTAAAATTTTTATTGATGATTCACTGTTTTGGATTGGAAGCCATTGGGCATTGCAAGGATTCTTATCTTATTGGAACTTTTTGTGGCTTTAGTATAATTCATGTTGATCAGTTTCTTGCCATAGTATATGGATTCTTTTATCATCCATTGGAAAACCTTAAGAGATATTTTATTCAATATGCAAGTCTAACGTTTATTTTATTCATCTCACTATGACCACGCCACTTTCTTGGCTGAAGAAATGGAAACATCAACAAGATGTCTATGTTGCATCATTTGTCCATGCTAAATTCATTTTCCTGCAAACTTGAAAAATGTAGATGAGTTACCTAACACCTATTGAGCTGATCTAAAAGGATCTTGTTTAGGAGTCACGCGTTTAAGGCTGTACAGTTTGAGTAATTTCAAAAAATCCACCTTTCCTTGTAATCTTTAGCCTTGATAGATATTTCTATCCAGATTCTTTGTTAATATAGATTTATTTTATTTCTCACCAACACGGTGAATTTAACTGCTTCAAGTTTGCAGGTAGAAGGAATTCAGGTTCATGCGGATGAAGGTGGCGCTACGCAAACACGTGGTGGCGTGTATTGGTTGATCTTGCCTGCCGGATGTCTCTCTCTCATTCTTGCTCTCTCGCTCTCTCTCACACACACATTTCATGTGGATGATACGAGCTGATTACTTTATTTTCATTGTAGATATTGGCTCATCATTCTGGGGAATGCTCTTAATACTAGCGTCTACAAATCTTCTTACTTCCAGAATAGCTGCAGGGTGCTTTCTTGTTTCCCTTCTTGTTGTACTTTGTGTAGCTAAGAATGTAAGTAGCTTTTTTTATATTTTCAATTTATCTGTTAAATACGTTATTTCTGCCGCTAATTGATCATTTGTGCTCTTACCGGAAATTAGAAAGTAAAATTGAATCCATCAGAATTTGGTTTCTTGGGAAACGTATTTTATTATCTTCTTTCCTTCGGATATGAATTTTAGATTGGTTTAGCTCTCATTTCTGCCATTACTTCCCAACGTTTCTATGTTCGCTATGTTCAAATTAAAAGTTTCTAGCTTAACCTTTAAATGCTAGAACCTTACATAGAGATGTCAGGCAATGCATATATTTAGTTAAACAACCTACCAGTTCCTTCTAACTCAATCGCATTTTAACGTTGGTTTTTTCTAATCGGAGATTTGAGTGATAGACCTATTCTTCATCTCTTAATAGACATTGTAGGTTGGTTGAGTTATACTTCGACTCTTTTTAACCTTTTGATATTACCGTGCTGTATTAACTCCATTTATTAAGGTTATGTGTACGAGTCTTTCCTTTCTTCTGCGGATAAGTCATAAATGTCATTTATTTTACCCTGATATTATGTCCACCTGTAATTTGTAATAATAGCTAAATTTATTGACTATATTATATTTGTGCCTTTACGGCAATTTGCAGTGGACTCTTCGCGGCCTCTGCATTGGTGAGTGTTAAAGCCTATAATACACATGGCTTGTTGGCTGTAGACGCCTGAACGTCCCTTCTGAAATATTCTCATTTTGTGCCATTAGGATTCATCGTTTTTCTTGGTGTTATCTGGGTCCTGCAAGAAACAACAAAAGTGCGTGTTCTCCGTTATGTAATCCTCTTTATTGGTAAAATTTATCTTCCTTTACATCACTCCAGAATTTCTATCATGTTTGTGCAGAAACAATGAGATGGACACAGACTGACAGATTTTATTTATCAAAACTGCAGGTGTAATGAACAGCCTATTCTCAGTTTACGGTATAGCTTCAAAATACATTCCACTTCAACAATCGTTACTGCTATATTAATAGCATTCATGTTATTTTCCAGATATTTATGATGATCTAATATCCCGAAGAGTTCATTCAAGTGATGCCGAGAAATTTGCAGAAGTGTGCCCTTGTCCATGTAACGGTGTTGGATGGGGTATTATTTGGTGAGTATCTTACATTATGACATCCTCGACTCATAATTTCAAAGAAATATACTTATAATTGAATACGAGATGCAGGGGTTTTATCTCTTTCATCTTTCTTTGTGGAGCTATGTACCTTGGTCTTGTTATCTTGTCTTGAGGTAAATTCAGCTTCTGCTACACAACTTCAATGATAATTTAATCACAAATGCGTTTAATTCCAACTTACAATGTAATTTTTTAATGCATGGCCAGGTTCGGGTGATTTTATTGTTGAAGAACTCAACTAATTCTTTGGACGTGAAAATATGAATAAAGATTGGAATTTTCATGGAAAGGAACGAACGTTGGGGTACTCTGTCCTCTTTGTATTCAACAATTTGGAGAACTCTGTAATTTGATTTTTATTGATTCAGAGTTGAAATTTTTTTATTACCATAGAAGCTGGTATGAAAAATTAAAAGAAAACACACATTACCTTAATTGTAATTATAAAGAGAGAATCC ATGAAACCTAATTGGGAGCTTAAGCACTGCTGCAATCACGAGCAAGTTGTGTTTCTGATCACCGTTTCTGTTTGTACTGTTGTTATATTAGCGCTCTGGAGGACGATACTGCTGAAACCATTCAAACTTGTCACCGTGTTTCTTCACGAGGCCAGCCATGCCATTGTTTGCAAGCTTACCTGTGGTCATGTAGAAGGAATTCAGGTTCATGCGGATGAAGGTGGCGCTACGCAAACACGTGGTGGCGTGTATTGGTTGATCTTGCCTGCCGGATATATTGGCTCATCATTCTGGGGAATGCTCTTAATACTAGCGTCTACAAATCTTCTTACTTCCAGAATAGCTGCAGGGTGCTTTCTTGTTTCCCTTCTTGTTGTACTTTGTGTAGCTAAGAATTGGACTCTTCGCGGCCTCTGCATTGGATTCATCGTTTTTCTTGGTGTTATCTGGGTCCTGCAAGAAACAACAAAAGTGCGTGTTCTCCGTTATGTAATCCTCTTTATTGGTGTAATGAACAGCCTATTCTCAGTTTACGATATTTATGATGATCTAATATCCCGAAGAGTTCATTCAAGTGATGCCGAGAAATTTGCAGAAGTGTGCCCTTGTCCATGTAACGGTGTTGGATGGGGTATTATTTGGGGTTTTATCTCTTTCATCTTTCTTTGTGGAGCTATGTACCTTGGTCTTGTTATCTTGTCTTGA ATGAAACCTAATTGGGAGCTTAAGCACTGCTGCAATCACGAGCAAGTTGTGTTTCTGATCACCGTTTCTGTTTGTACTGTTGTTATATTAGCGCTCTGGAGGACGATACTGCTGAAACCATTCAAACTTGTCACCGTGTTTCTTCACGAGGCCAGCCATGCCATTGTTTGCAAGCTTACCTGTGGTCATGTAGAAGGAATTCAGGTTCATGCGGATGAAGGTGGCGCTACGCAAACACGTGGTGGCGTGTATTGGTTGATCTTGCCTGCCGGATATATTGGCTCATCATTCTGGGGAATGCTCTTAATACTAGCGTCTACAAATCTTCTTACTTCCAGAATAGCTGCAGGGTGCTTTCTTGTTTCCCTTCTTGTTGTACTTTGTGTAGCTAAGAATTGGACTCTTCGCGGCCTCTGCATTGGATTCATCGTTTTTCTTGGTGTTATCTGGGTCCTGCAAGAAACAACAAAAGTGCGTGTTCTCCGTTATGTAATCCTCTTTATTGGTGTAATGAACAGCCTATTCTCAGTTTACGATATTTATGATGATCTAATATCCCGAAGAGTTCATTCAAGTGATGCCGAGAAATTTGCAGAAGTGTGCCCTTGTCCATGTAACGGTGTTGGATGGGGTATTATTTGGGGTTTTATCTCTTTCATCTTTCTTTGTGGAGCTATGTACCTTGGTCTTGTTATCTTGTCTTGA
BLAST of CSPI01G03920 vs. TrEMBL
Match: A0A0A0LSQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024180 PE=4 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 3.0e-129 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1
BLAST of CSPI01G03920 vs. TrEMBL
Match: A0A061G1Y0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_012366 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 1.4e-121 Identity = 210/234 (89.74%), Postives = 230/234 (98.29%), Query Frame = 1
BLAST of CSPI01G03920 vs. TrEMBL
Match: A0A061FU74_THECC (Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_012366 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 1.4e-121 Identity = 210/234 (89.74%), Postives = 230/234 (98.29%), Query Frame = 1
BLAST of CSPI01G03920 vs. TrEMBL
Match: A0A0D2RXU7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G060100 PE=4 SV=1) HSP 1 Score: 439.9 bits (1130), Expect = 2.0e-120 Identity = 205/234 (87.61%), Postives = 228/234 (97.44%), Query Frame = 1
BLAST of CSPI01G03920 vs. TrEMBL
Match: A0A067JJI2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05904 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 7.5e-120 Identity = 210/234 (89.74%), Postives = 227/234 (97.01%), Query Frame = 1
BLAST of CSPI01G03920 vs. TAIR10
Match: AT1G67060.1 (AT1G67060.1 unknown protein) HSP 1 Score: 367.5 bits (942), Expect = 6.3e-102 Identity = 181/232 (78.02%), Postives = 203/232 (87.50%), Query Frame = 1
BLAST of CSPI01G03920 vs. NCBI nr
Match: gi|449439085|ref|XP_004137318.1| (PREDICTED: uncharacterized protein LOC101214542 [Cucumis sativus]) HSP 1 Score: 469.2 bits (1206), Expect = 4.3e-129 Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1
BLAST of CSPI01G03920 vs. NCBI nr
Match: gi|659106719|ref|XP_008453410.1| (PREDICTED: uncharacterized protein LOC103494132 isoform X1 [Cucumis melo]) HSP 1 Score: 458.8 bits (1179), Expect = 5.9e-126 Identity = 234/250 (93.60%), Postives = 234/250 (93.60%), Query Frame = 1
BLAST of CSPI01G03920 vs. NCBI nr
Match: gi|590664714|ref|XP_007036548.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121 Identity = 210/234 (89.74%), Postives = 230/234 (98.29%), Query Frame = 1
BLAST of CSPI01G03920 vs. NCBI nr
Match: gi|590664717|ref|XP_007036549.1| (Uncharacterized protein isoform 2, partial [Theobroma cacao]) HSP 1 Score: 443.7 bits (1140), Expect = 2.0e-121 Identity = 210/234 (89.74%), Postives = 230/234 (98.29%), Query Frame = 1
BLAST of CSPI01G03920 vs. NCBI nr
Match: gi|823169691|ref|XP_012484279.1| (PREDICTED: uncharacterized protein LOC105798670 isoform X1 [Gossypium raimondii]) HSP 1 Score: 439.9 bits (1130), Expect = 2.8e-120 Identity = 205/234 (87.61%), Postives = 228/234 (97.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |