CSPI01G03790 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGAATCATGTGGCCAATAAATCTTCCCTTGTAAAACCCCACATAACTCATCTAACCGCTGTAGATCTATCCACGTACATGAAAGAGGAAATCAACGGCTCAGAAATACATTATCCGATGGTCGTTGGCCCAGCTTAGAATTGCTCCTCTCCAATTCCCAACCTACCCATCATCTTCATCTCCGTCCTATGAATAGTGAACTCAAACTCCTCTGCTTCTCCTCTTTCTCCATTTCTCTTCAATTCTCTCTCTCTCTCTAAACCCACTCCAATCTAAGTTCTCTGCTTCTCTCCCCTTGTTTCCTTCTCTCTTTCTCTCCCTCCTTTCTGCGGAGGAGCTCGCCATTTCAGGTCTCTCCTCTCCCTCTCTCTGTTTCTCTTGGTTTTCTATTTCTTTTAACAACATTTTTTGTTTTATGCAAATCTTTCTGGGGGTTGCCTTTCTTCTTTTCTGCGCAATTTTTTGTTCCTTTTTTGTGGGTTTGATTCCTAAAGGAAGATAATGGATTTTAATGTTAATTTGACTATAACCTTCACTGAAGGGGAGGACTGATGGAGATGATTTTTTAATTTTCTACCCTTTTCTTTTTGTTTTCCCTCAATTTTTAGCTCTCTTCTCCAACTATTATCCGTTTGTTGTTTTTGTTGCTCGAGAGGAGGGGCCCTCTTTGAGCTTTGTGTTGGACATATCCACGTCTTTCTCAAATCTGTTAAGAGAGAAAAGGAACTCTTGATTTACACGTAAACAGAGTTTAAAATCGATTTTTCTTTCTACTTGGCTGAATAATCTAAGTTGCCTGAAAGGTGTTTGTTTGTTTGTTTGTCTGTCTGTCTGTTTTAGATCTTTAAATTTGTAAGGAGGAATATCAGAGAGAATGAACAGGTGGGTTTATGAGCAGAACGCCATGGCTGCCTGCCAGGAGATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTTTTCAAACCCTTCCTGATAATGATCCCATCCCAGCTTATAGATGGCCCATCAGGTTCGTTAGTCCCAATTTAAGCTTCTTTTTGCCTTAATCAGCAACTTTCTGCTTTCAATTATGTAGAATCGAACTTGAATCTCTTCGAATTAACTTCTGATATGTGATGAATTTGCTTCCTTACAGCCATTCCAAGACTGGAAATTCAAGAGCCGGAGCTGAGTTTCTAGATATGATCCTCACTAAGGTTATTAATTACCATATCTCTCGCTCACTAAGCCCTTGATTTTTAATTATCATTGATGACTTAAATCTCTTGTGTATGAAATTAAAGAGCTACCACTTGCCTATAATCTTATAGTGGGTTGTGTTTATATCATAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCATCATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTTCAAGATGAGCAATTTGGCAATGGTAACAACACTATCTTCCAACCATGCGAAGGGCCACCATCTCCATCCACCCATAAAGGAGGATGCGCCCGAGCAAAATTCGGGCATCGACCAGCAGCAGTTAGAATTGAAGGATTCGACTGTCTCAACCGCGATGCCCGAAACTGCAGCATTTCTGCTGTGGCTTAGAGACCATATATATATAACCAAATGGGGAAGGAGGAGGAGGAGGGAGGTAGCCATAGCCTAAGTTTTTTTTGAAGTGGGAGAAGATTTATGACAGAGAAATTGAATTTGAAACTAAAACTAATGTGTTTTTTTTCTTTTTGTTTTCATCTTTTTGATTAGTGTGTAAAGTTGTACATAGAAGAGTCGATGAAATGGCATGATGGGGTTTGTTCTTATCGAGTCCTTTTGTTATTAGTTGTTGTTCATGAAATCATCTCAAAGGAGATATCTGTGTAATTAAGGTGACTAATGATGTTTTGGACTATATCTAATCAGAGGAAATAAAGTAGAGAAAGGCAAGATTTAAGCCTTTCTCCATTGTCTGTCTTTGTTGTTTTCTTATA ATGAACAGGTGGGTTTATGAGCAGAACGCCATGGCTGCCTGCCAGGAGATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTTTTCAAACCCTTCCTGATAATGATCCCATCCCAGCTTATAGATGGCCCATCAGCCATTCCAAGACTGGAAATTCAAGAGCCGGAGCTGAGTTTCTAGATATGATCCTCACTAAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCATCATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTTCAAGATGAGCAATTTGGCAATGGTAACAACACTATCTTCCAACCATGCGAAGGGCCACCATCTCCATCCACCCATAAAGGAGGATGCGCCCGAGCAAAATTCGGGCATCGACCAGCAGCAGTTAGAATTGAAGGATTCGACTGTCTCAACCGCGATGCCCGAAACTGCAGCATTTCTGCTGTGGCTTAG ATGAACAGGTGGGTTTATGAGCAGAACGCCATGGCTGCCTGCCAGGAGATGAGGATGGAATCTGTGGTTTGTCCAAAGCCACGTCGTTTGGTTTTTCAAACCCTTCCTGATAATGATCCCATCCCAGCTTATAGATGGCCCATCAGCCATTCCAAGACTGGAAATTCAAGAGCCGGAGCTGAGTTTCTAGATATGATCCTCACTAAGGAAAGTTATGGTGAAAATTTTAGCCACCAATTAGCATCATCTCCACCATTCTTTTGGGGGTCTCCACCAAGTAGAGCTTCCAACCCTTTAGTTCAAGATGAGCAATTTGGCAATGGTAACAACACTATCTTCCAACCATGCGAAGGGCCACCATCTCCATCCACCCATAAAGGAGGATGCGCCCGAGCAAAATTCGGGCATCGACCAGCAGCAGTTAGAATTGAAGGATTCGACTGTCTCAACCGCGATGCCCGAAACTGCAGCATTTCTGCTGTGGCTTAG
BLAST of CSPI01G03790 vs. TrEMBL
Match: A0A0A0LS24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G023070 PE=4 SV=1) HSP 1 Score: 345.9 bits (886), Expect = 2.7e-92 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 1
BLAST of CSPI01G03790 vs. TrEMBL
Match: W9RJM9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019963 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.0e-43 Identity = 99/162 (61.11%), Postives = 118/162 (72.84%), Query Frame = 1
BLAST of CSPI01G03790 vs. TrEMBL
Match: A0A151TRM1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_008899 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 9.7e-42 Identity = 101/166 (60.84%), Postives = 117/166 (70.48%), Query Frame = 1
BLAST of CSPI01G03790 vs. TrEMBL
Match: M5WNQ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012578mg PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 3.7e-41 Identity = 96/164 (58.54%), Postives = 114/164 (69.51%), Query Frame = 1
BLAST of CSPI01G03790 vs. TrEMBL
Match: A0A067J8M2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05890 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 6.3e-41 Identity = 100/171 (58.48%), Postives = 116/171 (67.84%), Query Frame = 1
BLAST of CSPI01G03790 vs. TAIR10
Match: AT3G02555.1 (AT3G02555.1 unknown protein) HSP 1 Score: 122.1 bits (305), Expect = 3.2e-28 Identity = 78/176 (44.32%), Postives = 95/176 (53.98%), Query Frame = 1
BLAST of CSPI01G03790 vs. TAIR10
Match: AT5G16110.1 (AT5G16110.1 unknown protein) HSP 1 Score: 119.0 bits (297), Expect = 2.7e-27 Identity = 81/182 (44.51%), Postives = 103/182 (56.59%), Query Frame = 1
BLAST of CSPI01G03790 vs. TAIR10
Match: AT1G68490.1 (AT1G68490.1 unknown protein) HSP 1 Score: 115.9 bits (289), Expect = 2.3e-26 Identity = 77/185 (41.62%), Postives = 102/185 (55.14%), Query Frame = 1
BLAST of CSPI01G03790 vs. TAIR10
Match: AT1G13390.1 (AT1G13390.1 unknown protein) HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16 Identity = 61/171 (35.67%), Postives = 87/171 (50.88%), Query Frame = 1
BLAST of CSPI01G03790 vs. NCBI nr
Match: gi|449440941|ref|XP_004138242.1| (PREDICTED: uncharacterized protein LOC101219468 [Cucumis sativus]) HSP 1 Score: 345.9 bits (886), Expect = 3.9e-92 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 1
BLAST of CSPI01G03790 vs. NCBI nr
Match: gi|659106657|ref|XP_008453392.1| (PREDICTED: uncharacterized protein LOC103494124 [Cucumis melo]) HSP 1 Score: 330.9 bits (847), Expect = 1.3e-87 Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 1
BLAST of CSPI01G03790 vs. NCBI nr
Match: gi|703092876|ref|XP_010094753.1| (hypothetical protein L484_019963 [Morus notabilis]) HSP 1 Score: 183.0 bits (463), Expect = 4.3e-43 Identity = 99/162 (61.11%), Postives = 118/162 (72.84%), Query Frame = 1
BLAST of CSPI01G03790 vs. NCBI nr
Match: gi|645270027|ref|XP_008240269.1| (PREDICTED: uncharacterized protein LOC103338791 [Prunus mume]) HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42 Identity = 98/164 (59.76%), Postives = 116/164 (70.73%), Query Frame = 1
BLAST of CSPI01G03790 vs. NCBI nr
Match: gi|1012358514|gb|KYP69698.1| (hypothetical protein KK1_008899 [Cajanus cajan]) HSP 1 Score: 177.9 bits (450), Expect = 1.4e-41 Identity = 101/166 (60.84%), Postives = 117/166 (70.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |