CSPI01G03180 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGAAACTAATCAAATATTTCAAGAGATGAGAGAAATTTTTGGTAGCACTGTTATTTATTTCTCTTACGATTCGAAGTTCCGTCGTCTATTTGCTGATATGATTCGCCGTTGGGAAATCGAGAAGATAGAAGAGTGATTTGAAGAGCGGCATGCCGTCCTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCCTCTCTTTCACAGAATTCTGCTACCCAACCTTCCCCTCGGAAAAATTTGGTATGTTTTTCTTCTTTACTCTCTCTCTCGTTCTTTTTCTGGGGCTTCTGTTGATTCTTCTTGGGTTTCAATCTCTTCCAAGGCTGAGGCTGCAAACAATAATGACGGACTTTTTAATGCCGAGGAGAAGAAACCCGATTTGTCAGATCAATTTGAGTATGCCCTTTTCTTTTTCTTCCTCTGTGGCTTGGTTTCAAGTTTAAGTCGTTACTGTTTCTTGCGATCTTTTTTATGGTTTTCCCTCTGATTTGTTTGAATATTGGACGAGGGAAATGTATTGATTATGTAAATTGAAATTGCTTTTGTACTCTGTGCTCTGTTTTTTTGTTTTCGAAGAGAAGAAGATGAAAAGAGTTCGTAATCGAGCTTCATAGTTATTTTTTTTTTTTTAAAAAAGAAAATCAATCCCTTGTATGAAAAAAGAGATGTGTGGAAAACCCTAGTTCGTTGTTTGCGTGATCTCCAGTTTTAATCGGAACTAATGTTGGTGGATATCATCAATGAAAGTCAAAATTCGAAAGATTCGATTTTTCTCAAGCGTAAGGATATAAAATTACTACAAATGGAACCTCGGAGAATTTATTTTATTTTTCCGTTTTTGAATTTGTAGTGCTCGTTCTTAGAATGGTAGGACGTTAAAATGAGACAGATGTTTGGTCACTAACTTCCCCCTTTTTTTTCCAAATAAGATATTGAATCTCATTCAAAGGGACAAAATAGATTACCCATAAAACTAAGTTGTGATTGGTTAGATATTGATTATTCAAGTGTGTGAGACATCATTGTCAGATTAGTTCTGATGGGGAATTTTCTGTTGCTCATCATTGAAATTTGAAAGGCTTAACAGTCAGTCAGTACTTGCTATCTAGTTTATTAATACTTGACTGAACTGAAAATCATCGAATTAAGTCAAGATATAAACAAAAACCACCACCAATGGAAGCTGGTTTTTCTTCTTTTTTTCATTTCTCACTCTCATGAAAACTTAGTTACATCAACTGCTACATGTTTGAAATTGCTCTCTTTGTTAGCTCTTATATGGAGACTGCCTATTGTATTACCATCAGTTAGACTTCTTGTTTAGTGAAATATGGGAAGGAGACAATTTAGTGGTGAACTTTTCTTTTTCTCAATTACCCGAGGTGTTTATGGCCTCCACTCTCCCTTATCTATCACTCTATGGAGAGACGTCCCCTATCTGGCCTTCTCCTGCAGAGAAAAATATTTGTGTACTGCCTTGTTTAAGAACTCTTATTTGCTTGCTTCCTATGATCTAGATTCTATATATTGAATGTATGTCAATAGTCTCCTTTGGACCTTGTGACTTCAAGAACTAAATTAACGAGAATTTGTTCTCCTTCAGATAGTGATAGTGGCTCAATGTCGTGCTATTTTCTTTATTCTTTCCAGAGATTTTGATAATTTCACTTCCATTGAGAAGTACCAGAAATATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTCTCCAAGAAAAACCTCTATGGAGGTAGGTACAAATGGCCCTTTGCTTCTTTATCAATTTTATCCCAGGCTTTATCCTCTTTTCCTGTTCTTACAATCTCATAATATTTGATATGAGCAGAAACCAAATCAAATCAGTTTAAAACGATAGCATTTTAGAAGAGTGTTCATTGGAAAAAGAACTAGCAATTGTTATTCTAGAAATACCATATCTTGTTTGTTCTTTTAATTTTCTTTTTCCATTATTTGTGACCAAAAACAGTTAAATACGTTCAGAAAAACAATTATTGATGCCCTCATTCCTTCATATGGAAACATCCACCATTTTGCAGGAAACATCTTTGAAGAGAACACAACAATCGACAACGAGATTATAAAGTCGAGCAAGTATATTCAAGAACTGGCTTTCATATATCTTTGTTGTTTGTCATTGTTATTGATCATCATGAGATAAATTATGTATGAATCTATGTTATACAGGTGGCCTTGTACAAGGTCTTTCGCTGATCCTTTGCAGGGTTTTGAAGATCATAGAAGCAGCTGTTCAACATCCGCCATGGAAAGCCACAGCGCCATCTCAAATGGGAAGCATGCTGTGAAGAAGAATGGATGATATAAGATGAAGTCTGGGGTGGGACTGCAGGATTTCGGGTAAATTGCAAAAACCATACCCCCTTTAACTTTTAACGGTAAAAATCAAGTCCTCAAACTTATACAAGTATTTAAATTAAACTATAAATGATAAAAAATTGAACTCTCAAACCTAAATAATTGTTATAGTTTCTACAATTACGTGAGGATGAGAATCCATTTTGCTTACTTATATAAGTTTAAGGACTCGATTTATGCCCTTGAAAATTTAAAGGTATATTGCAACCACTCCTTTTTAACGGTAACAAATAACAAATATTCGCACTTAAATTACATTGTCTCGATTTTAACTTAAACAAGAAATCAGCGATTGCCAATTATTCTTGGCATGTATTAGCCACGAGGAGCAGCAAAATTTAACATTGATTTGTATAAGATACTTTTCATACCCAAAATTTGATTAAGGTATATTCAATCTACTAGAGAGTTTGTTGCTTATGAAAATTTGAATGT ATGCCGTCCTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCCTCTCTTTCACAGAATTCTGCTACCCAACCTTCCCCTCGGAAAAATTTGGCTGAGGCTGCAAACAATAATGACGGACTTTTTAATGCCGAGGAGAAGAAACCCGATTTGTCAGATCAATTTGAAGATTTTGATAATTTCACTTCCATTGAGAAGTACCAGAAATATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTCTCCAAGAAAAACCTCTATGGAGGAAACATCTTTGAAGAGAACACAACAATCGACAACGAGATTATAAAGTCGAGCAAGTGGCCTTGTACAAGGTCTTTCGCTGATCCTTTGCAGGGTTTTGAAGATCATAGAAGCAGCTGTTCAACATCCGCCATGGAAAGCCACAGCGCCATCTCAAATGGGAAGCATGCTGTGAAGAAGAATGGATGA ATGCCGTCCTCTGCATCAGCTCCGGCCTCTCCTCCGTCGGCCTCTCTTTCACAGAATTCTGCTACCCAACCTTCCCCTCGGAAAAATTTGGCTGAGGCTGCAAACAATAATGACGGACTTTTTAATGCCGAGGAGAAGAAACCCGATTTGTCAGATCAATTTGAAGATTTTGATAATTTCACTTCCATTGAGAAGTACCAGAAATATGAAGCTGACTACGCTCAACGCCTAATGGCCAAATACTTCTCCAAGAAAAACCTCTATGGAGGAAACATCTTTGAAGAGAACACAACAATCGACAACGAGATTATAAAGTCGAGCAAGTGGCCTTGTACAAGGTCTTTCGCTGATCCTTTGCAGGGTTTTGAAGATCATAGAAGCAGCTGTTCAACATCCGCCATGGAAAGCCACAGCGCCATCTCAAATGGGAAGCATGCTGTGAAGAAGAATGGATGA
BLAST of CSPI01G03180 vs. TrEMBL
Match: A0A0A0LRW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015050 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 1.6e-75 Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 1
BLAST of CSPI01G03180 vs. TrEMBL
Match: A0A061FY82_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_014408 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 7.7e-33 Identity = 87/157 (55.41%), Postives = 109/157 (69.43%), Query Frame = 1
BLAST of CSPI01G03180 vs. TrEMBL
Match: V4TQS2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022625mg PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.0e-32 Identity = 84/157 (53.50%), Postives = 112/157 (71.34%), Query Frame = 1
BLAST of CSPI01G03180 vs. TrEMBL
Match: A0A059A4J9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02633 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.9e-31 Identity = 79/148 (53.38%), Postives = 102/148 (68.92%), Query Frame = 1
BLAST of CSPI01G03180 vs. TrEMBL
Match: W9R1D8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022933 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 4.2e-31 Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 1
BLAST of CSPI01G03180 vs. TAIR10
Match: AT5G60840.1 (AT5G60840.1 unknown protein) HSP 1 Score: 52.4 bits (124), Expect = 2.9e-07 Identity = 42/114 (36.84%), Postives = 58/114 (50.88%), Query Frame = 1
BLAST of CSPI01G03180 vs. NCBI nr
Match: gi|449440876|ref|XP_004138210.1| (PREDICTED: uncharacterized protein LOC101211493 [Cucumis sativus]) HSP 1 Score: 290.0 bits (741), Expect = 2.3e-75 Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 1
BLAST of CSPI01G03180 vs. NCBI nr
Match: gi|659106431|ref|XP_008453324.1| (PREDICTED: uncharacterized protein LOC103494077 [Cucumis melo]) HSP 1 Score: 263.5 bits (672), Expect = 2.3e-67 Identity = 140/151 (92.72%), Postives = 143/151 (94.70%), Query Frame = 1
BLAST of CSPI01G03180 vs. NCBI nr
Match: gi|645269574|ref|XP_008240059.1| (PREDICTED: uncharacterized protein LOC103338619 [Prunus mume]) HSP 1 Score: 164.5 bits (415), Expect = 1.5e-37 Identity = 93/153 (60.78%), Postives = 116/153 (75.82%), Query Frame = 1
BLAST of CSPI01G03180 vs. NCBI nr
Match: gi|590669141|ref|XP_007037690.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-32 Identity = 87/157 (55.41%), Postives = 109/157 (69.43%), Query Frame = 1
BLAST of CSPI01G03180 vs. NCBI nr
Match: gi|567896694|ref|XP_006440835.1| (hypothetical protein CICLE_v10022625mg [Citrus clementina]) HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32 Identity = 84/157 (53.50%), Postives = 112/157 (71.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |