CSPI01G02840 (gene) Wild cucumber (PI 183967)

NameCSPI01G02840
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 1795868 .. 1796401 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTGCCGCAAAATACTCTTCTGCGGCCTCCCCCTGTTGTCGACGAGGCAGCCACCAGAGAACAGACATTGGAACGAAGGCTCTTCCCAGCCTAAGTTTCTTGATGGTGAGACAAATGCCCATCCAATCCAACCAAAGCCAATACTTAACACCTCTCACCCTGCCCGAGATGATACGTTAGATGGTGAGGAAGAAGATATCTTCACGTTCATCACGCGGACTGTTTCCACACCCATGATTGAAGCTCTAGATCATGTTGCAAGCATGCAAAGAGACTTGAAATTTCAGTTCTATCAATTTCGAGAGGAGCTAAACGAGGTGTGTCTTGAGACGGATAAGATGAAAGCCACTGTTCAACGTCTTGAGATGGATGAGATCCATTATGCTGATCTTCATAGAGATCTTGAATTTCTTGAACAAAAGTTGGACAATCATCAGCAAGGTCTGGAGAGCTCATTGCCAATGTTAGGAAAAATGAACTCATTGTTCAACGCCTCTCTCAAAGGCAAAACATGCGGTTCATCACGCTGA

mRNA sequence

ATGACTTGCCGCAAAATACTCTTCTGCGGCCTCCCCCTGTTGTCGACGAGGCAGCCACCAGAGAACAGACATTGGAACGAAGGCTCTTCCCAGCCTAAGTTTCTTGATGGTGAGACAAATGCCCATCCAATCCAACCAAAGCCAATACTTAACACCTCTCACCCTGCCCGAGATGATACGTTAGATGGTGAGGAAGAAGATATCTTCACGTTCATCACGCGGACTGTTTCCACACCCATGATTGAAGCTCTAGATCATGTTGCAAGCATGCAAAGAGACTTGAAATTTCAGTTCTATCAATTTCGAGAGGAGCTAAACGAGGTGTGTCTTGAGACGGATAAGATGAAAGCCACTGTTCAACGTCTTGAGATGGATGAGATCCATTATGCTGATCTTCATAGAGATCTTGAATTTCTTGAACAAAAGTTGGACAATCATCAGCAAGGTCTGGAGAGCTCATTGCCAATGTTAGGAAAAATGAACTCATTGTTCAACGCCTCTCTCAAAGGCAAAACATGCGGTTCATCACGCTGA

Coding sequence (CDS)

ATGACTTGCCGCAAAATACTCTTCTGCGGCCTCCCCCTGTTGTCGACGAGGCAGCCACCAGAGAACAGACATTGGAACGAAGGCTCTTCCCAGCCTAAGTTTCTTGATGGTGAGACAAATGCCCATCCAATCCAACCAAAGCCAATACTTAACACCTCTCACCCTGCCCGAGATGATACGTTAGATGGTGAGGAAGAAGATATCTTCACGTTCATCACGCGGACTGTTTCCACACCCATGATTGAAGCTCTAGATCATGTTGCAAGCATGCAAAGAGACTTGAAATTTCAGTTCTATCAATTTCGAGAGGAGCTAAACGAGGTGTGTCTTGAGACGGATAAGATGAAAGCCACTGTTCAACGTCTTGAGATGGATGAGATCCATTATGCTGATCTTCATAGAGATCTTGAATTTCTTGAACAAAAGTTGGACAATCATCAGCAAGGTCTGGAGAGCTCATTGCCAATGTTAGGAAAAATGAACTCATTGTTCAACGCCTCTCTCAAAGGCAAAACATGCGGTTCATCACGCTGA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G02840.1CSPI01G02840.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 129..149
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G02840CsaV3_1G002880Cucumber (Chinese Long) v3cpicucB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G02840Silver-seed gourdcarcpiB0420
CSPI01G02840Silver-seed gourdcarcpiB0628
CSPI01G02840Silver-seed gourdcarcpiB0823
CSPI01G02840Cucumber (Chinese Long) v3cpicucB003
CSPI01G02840Cucumber (Chinese Long) v3cpicucB044
CSPI01G02840Watermelon (97103) v2cpiwmbB056
CSPI01G02840Watermelon (97103) v2cpiwmbB063
CSPI01G02840Watermelon (97103) v2cpiwmbB079
CSPI01G02840Wax gourdcpiwgoB053
CSPI01G02840Wax gourdcpiwgoB071
CSPI01G02840Wax gourdcpiwgoB118
CSPI01G02840Wild cucumber (PI 183967)cpicpiB000
CSPI01G02840Wild cucumber (PI 183967)cpicpiB029
CSPI01G02840Cucumber (Gy14) v1cgycpiB138
CSPI01G02840Cucumber (Gy14) v1cgycpiB310
CSPI01G02840Cucumber (Gy14) v1cgycpiB427
CSPI01G02840Cucurbita maxima (Rimu)cmacpiB070
CSPI01G02840Cucurbita maxima (Rimu)cmacpiB086
CSPI01G02840Cucurbita maxima (Rimu)cmacpiB226
CSPI01G02840Cucurbita maxima (Rimu)cmacpiB693
CSPI01G02840Cucurbita moschata (Rifu)cmocpiB062
CSPI01G02840Cucurbita moschata (Rifu)cmocpiB079
CSPI01G02840Cucurbita moschata (Rifu)cmocpiB212
CSPI01G02840Cucumber (Chinese Long) v2cpicuB000
CSPI01G02840Cucumber (Chinese Long) v2cpicuB005
CSPI01G02840Cucumber (Chinese Long) v2cpicuB037
CSPI01G02840Melon (DHL92) v3.5.1cpimeB005
CSPI01G02840Melon (DHL92) v3.5.1cpimeB055
CSPI01G02840Melon (DHL92) v3.5.1cpimeB026
CSPI01G02840Watermelon (Charleston Gray)cpiwcgB060
CSPI01G02840Watermelon (Charleston Gray)cpiwcgB066
CSPI01G02840Watermelon (Charleston Gray)cpiwcgB083
CSPI01G02840Watermelon (97103) v1cpiwmB067
CSPI01G02840Watermelon (97103) v1cpiwmB099
CSPI01G02840Cucurbita pepo (Zucchini)cpecpiB353
CSPI01G02840Cucurbita pepo (Zucchini)cpecpiB512
CSPI01G02840Cucurbita pepo (Zucchini)cpecpiB656
CSPI01G02840Bottle gourd (USVL1VR-Ls)cpilsiB024
CSPI01G02840Bottle gourd (USVL1VR-Ls)cpilsiB070
CSPI01G02840Melon (DHL92) v3.6.1cpimedB005
CSPI01G02840Melon (DHL92) v3.6.1cpimedB028
CSPI01G02840Melon (DHL92) v3.6.1cpimedB049
CSPI01G02840Cucumber (Gy14) v2cgybcpiB001
CSPI01G02840Cucumber (Gy14) v2cgybcpiB004