CSPI01G02620 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G02620
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionSWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
LocationChr1 : 1661608 .. 1665505 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGTCCGAACCCTAAATCAATTCACTCTCATTTTTCTTCTATGGATATCACTGAGGAGCAGCGAAAGCGAGCTGAAGCAAACCGATTAGCTGCCATAGCCAAACGCAAAGCTCTGGTTGAATCTTCTAATGGCCAACTACAACACCATGAGCCATGGAAGCTTTTCAAATGTCGTAAGTTTTCCACTGAATTTGATGCTTCCACTACCATCCAATCATCGAAAAGCTTAACAGTTAACAACACCCATTTGCCTGAAAAGTTCCGAGTAAGGCTGGAAATTTGCTCCCCTGACTCGTTCTCCATCACGCCGGAAGTCGTGGAAGGTTGCTTTTACCCGGGAGAGGAGAATTGCTTCAGGATATTGAGCGACTGTTTATCTAATGTATGGATTTTTGGAAGTTTCTTATCAATGTATTTGTTTTGGAATTTCTGTAAGCGCTTTTCTTTTAAATGTCTTCTGAATGGGGGAACTTGTGATTCCTTCTGCACTTGTCTAGCTCGCTGGGGTATTTCTTTTACTTTACTCTATCACGCGGCTTATCGGGTTTTTCCCATTTTCACTGCACACCTTAAGGATCACATTTGAAAACTTGATTTTTGCCTGCTTGACATTATTCTGATTACTAGCGCCTTATGCCTCTCTCTTTTGACAATATCTAAATTTCCGAGTTACTTGCATCATGAATTTGACCAATATGTGTTTAGAACGTTGAATTCTAGTAGCTTTATAATTGTGACGACCGTTTGTTATTCTTTCAGGTCACACATTCTCACTACACACAAATTATAGGCGGAGGAAAGGCTTGTGTTTATAAGCTGAGAGATTATTGTTCTATATTGAAATGTTTAAAGAACTCCAAGGACATTGATGTTGAAGAGATACCATGGACAACATTTAACGTGGTCGAGAGACTCTCGCATTCATTTAGTTCAGGGCGATGGATGCCATGCAGGCCAGAGCATTTGTCAGATGAGAAGGTCGAGGAATTAATGAAGAAATTACCAGAACGGTTGCTGAATAGGCTCTTACCTTTCCAACTTGATGGTATAAGATTTGGCCTGCAGAGGGGTGGCCGATGTTTGATAGCTGATGAAATGGGTCTTGGGAAAACACTACAGGTACTAAATTATATACAAACAAACTTCTGCGCTTCTCATTGACAGATCTGTCTAGTTTTTTTTTTTTCTCTATTAGTTAGTCAGGTGCTACGGCCACGTCCTTCGTTCTATTACTTAATTTTACTTGTTGAAAGTTCTTATTGGCATTGGAATGAGTACCTGGTTTCCATCTGAGTCGTTCACATTCACATTTCATTTCATTTAGTGAAATATTATTAAGTAGTCTCACTTAAGTACTTAATGTGGTCGCTGCCGAGCAAGTTTATGTTGTTTGGCTTGCTTGTTCCAAATGCTTGAAGTTCTCGGTCATCGTTTGACGATGATGGTTTGTTGAGAAAAGAATCAGATGAAAGTTGCAGAAATCATAGGGCTTTGAAGAGTCAAATTCCTTTAAATTAAGTTTTGCAGGGTATGGTAGGTTGTGGTTTTTTTGGAAGTTATAGGCACTGGATTTGAGTGAGTGGATTTTGGTATAGTGTGTGCTAGCTCTCAAAGTTTGTGCAGTTAGTGTGTGCTCTCAAAATTTTTGGTTTTGTGGTTAACATGTGCTAGATCTCAAAGTTTTGGTTGTGTGTTGTACGTTACTTGTACATGTGTGAACTCCCTAAAAAGTTCTGCTATTTCATGAACCACTAACCAAGCACCGCCTTCTGGGATGGTGTTGTGACAAAGTGCTTTTTGGTTAATTGTTAGAATTCAAATTAAAAGGAGGTTTTATTTATATGCCTTTTTTTTGGATGGGTGGGGTGGGGACAAGATAGTTTTAGCCTTTAAACTGCTAAAGCAATTCTCTAGTTAATTAAACTACAACATTTTCCTGTTTACAAAATTATGTCATTTTCTTAAAAAATAATTATTTTTAGTGAATGATATAAATATTTTGGAATGAGAAAAAAATAATTATTTTTAGTGAATGATATAAATATTTTGGAATGAGTTCGAGCCATGGTGGTCACCTACTTATTCAATATCCCTTAGTTACCTTGACAACCAAATGTAATATGGTTAGACCATTGTTCTGTGAGAATGGTTGGTGTACATGTGAGTTGGCTCCAAGACACACGGATATAAAGGTGTATATATATAAATTTTCTCAAACAACTCTGAAAGGAATTTCAAGGGATGGCCTAACACATCTTTTTTGTTTACTTCTCGGTGCTCACGTACATCCTTTTGCATTCGTGCTGTAATTTTTTGCATTACTCACAAATGTTTGCAGCATTTAGCTAAATCATGATATCAATTTTGTTTACTTATGAAGCCCATCCTTGTATTTTAAAATTTTTGATATCAAGCAAGGAAGTATCTTGTTAATCTACCGTCTCTGCTATCACAAAAAGATATATGACCTTTGTAGGCATGATTGTCTTCAGGCCATTGCAATTGCTTGCTGCCTCATGGATGAAGAGGGTTCAATACTTGTTGTTTGCCCTGCGGTTTTACGCTTTTCCTGGGCGGAAGAACTAGAACGTTGGCTTCCATTTTGTTTGCCTTCGGATATTCATCTTGGTAATGTATTTTTAAAAAAATAGATTTGACGCCCTTCGTTCTTACAGAACATGCACTAATCTTGTCAAGGTAGAAAAGTTTGTTTATCGGATAATCCCTCTTCTGGTTTAATTTAAAAGGTTCAATTGACTATTATTGATATAATATAAAATAACAAAATGAGATACATCTTTGTACAACTTTTGTTAATAGATGGAAATATTGTTTGATGATTTTTAAAAACTTTCGAGAGAGATCCATCGCTGTACGATTGAATTCCTTTACCTTCGTTGTATGTTAAGAGATTTATTGGTTAGGCTTTCTAGCTATAGTTCCCCAAACATAGATTGAATTCAATTTTAGGTACCATTTATTATTTTTTTATAGGAATTTTAGGTACCATTTATTATTTTCTTATAGGAATTTTAGGTACCATTTATTTATGTAACAATCTAATTTATAATTTGCATGGGCAATCAGAACTTGTGACTTCTACAATTTATGGAGATTGGCAAGTATATGACCTAGTTAGCGTGCCTTACTCTGGTTTTCTTTTTCCTTTTTACTGCACCGTTAATGCTAATTTAGATTGGAATTCATTGTATTTCTCTCATTTATGGAGGCAATGCGTTATCTCCCTAATATTTTTGATGATCCATTTCATTTGAATGAAAAGTTTCACGTTTCTTATAAATGTCATTGTACCATTGATTCTCTTATTTGCTATAATAAGTTTCTTTTCACATTATTACTGTTCATGTATAGTGTGAATACTTTCTTTTCCTTTCAACTTAAGCAATTTATTCTTTTCCAGTTTTTGGTCATTTGGACAATCCTTGCCACTTATCAAAGTTCCCAAAAATTGTGGTTATATCATATACGATGCTTCAGCGTTTGCGTAAGAGCATTTTTCAACAGAAATGGTCTTTACTGATTGTTGATGAATCTCATCATGTAAGATGTGCCAAGAAATCATCTGAACCAGAAGAGGTATTTATTTTTGGTTTTTTGTTGGATGCTCTCTTTTTCTTTCAGTTGATAGAAATTTCTTTCTATTTATTGAAAAGAGAGACAACGAGTTCACACCAATTTACGTGGAAACCCGAGTACCGGGAGAAAAACCACGATTGTTTGTGTTGTTATTATTTTCTAATAAATAAAGCAATAGGTACAAGGGAGAATAAATAGAGTACACAATGGAATAAAAAAAGAAAAGATTTAGGAAAATAAGGAATACATTCCCATAATCTTTCCATAATTACTATAGGATTCTAACAAGGAAAAAGCCTAG

mRNA sequence

ATGGATATCACTGAGGAGCAGCGAAAGCGAGCTGAAGCAAACCGATTAGCTGCCATAGCCAAACGCAAAGCTCTGGTTGAATCTTCTAATGGCCAACTACAACACCATGAGCCATGGAAGCTTTTCAAATGTCGTAAGTTTTCCACTGAATTTGATGCTTCCACTACCATCCAATCATCGAAAAGCTTAACAGTTAACAACACCCATTTGCCTGAAAAGTTCCGAGTAAGGCTGGAAATTTGCTCCCCTGACTCGTTCTCCATCACGCCGGAAGTCGTGGAAGGTTGCTTTTACCCGGGAGAGGAGAATTGCTTCAGGATATTGAGCGACTGTTTATCTAATGTCACACATTCTCACTACACACAAATTATAGGCGGAGGAAAGGCTTGTGTTTATAAGCTGAGAGATTATTGTTCTATATTGAAATGTTTAAAGAACTCCAAGGACATTGATGTTGAAGAGATACCATGGACAACATTTAACGTGGTCGAGAGACTCTCGCATTCATTTAGTTCAGGGCGATGGATGCCATGCAGGCCAGAGCATTTGTCAGATGAGAAGGTCGAGGAATTAATGAAGAAATTACCAGAACGGTTGCTGAATAGGCTCTTACCTTTCCAACTTGATGGTATAAGATTTGGCCTGCAGAGGGGTGGCCGATGTTTGATAGCTGATGAAATGGGTCTTGGGAAAACACTACAGGCCATTGCAATTGCTTGCTGCCTCATGGATGAAGAGGGTTCAATACTTGTTGTTTGCCCTGCGGTTTTACGCTTTTCCTGGGCGGAAGAACTAGAACGTTGGCTTCCATTTTGTTTGCCTTCGGATATTCATCTTGTTTTTGGTCATTTGGACAATCCTTGCCACTTATCAAAGTTCCCAAAAATTGTGGTTATATCATATACGATGCTTCAGCGTTTGCGTAAGAGCATTTTTCAACAGAAATGGTCTTTACTGATTGTTGATGAATCTCATCATGTAAGATGTGCCAAGAAATCATCTGAACCAGAAGAGGATTCTAACAAGGAAAAAGCCTAG

Coding sequence (CDS)

ATGGATATCACTGAGGAGCAGCGAAAGCGAGCTGAAGCAAACCGATTAGCTGCCATAGCCAAACGCAAAGCTCTGGTTGAATCTTCTAATGGCCAACTACAACACCATGAGCCATGGAAGCTTTTCAAATGTCGTAAGTTTTCCACTGAATTTGATGCTTCCACTACCATCCAATCATCGAAAAGCTTAACAGTTAACAACACCCATTTGCCTGAAAAGTTCCGAGTAAGGCTGGAAATTTGCTCCCCTGACTCGTTCTCCATCACGCCGGAAGTCGTGGAAGGTTGCTTTTACCCGGGAGAGGAGAATTGCTTCAGGATATTGAGCGACTGTTTATCTAATGTCACACATTCTCACTACACACAAATTATAGGCGGAGGAAAGGCTTGTGTTTATAAGCTGAGAGATTATTGTTCTATATTGAAATGTTTAAAGAACTCCAAGGACATTGATGTTGAAGAGATACCATGGACAACATTTAACGTGGTCGAGAGACTCTCGCATTCATTTAGTTCAGGGCGATGGATGCCATGCAGGCCAGAGCATTTGTCAGATGAGAAGGTCGAGGAATTAATGAAGAAATTACCAGAACGGTTGCTGAATAGGCTCTTACCTTTCCAACTTGATGGTATAAGATTTGGCCTGCAGAGGGGTGGCCGATGTTTGATAGCTGATGAAATGGGTCTTGGGAAAACACTACAGGCCATTGCAATTGCTTGCTGCCTCATGGATGAAGAGGGTTCAATACTTGTTGTTTGCCCTGCGGTTTTACGCTTTTCCTGGGCGGAAGAACTAGAACGTTGGCTTCCATTTTGTTTGCCTTCGGATATTCATCTTGTTTTTGGTCATTTGGACAATCCTTGCCACTTATCAAAGTTCCCAAAAATTGTGGTTATATCATATACGATGCTTCAGCGTTTGCGTAAGAGCATTTTTCAACAGAAATGGTCTTTACTGATTGTTGATGAATCTCATCATGTAAGATGTGCCAAGAAATCATCTGAACCAGAAGAGGATTCTAACAAGGAAAAAGCCTAG
Homology
[Close]
BLAST of CSPI01G02620 vs. Swiss-Prot
Match: ZRAB3_MOUSE (DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus GN=Zranb3 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-24
Identity = 62/140 (44.29%), Postives = 93/140 (66.43%), Query Frame = 1 

Query: 195 LPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEGSILVVCP 254
           LP++L  +LLPFQ DGI F L+R GRC++ADEMGLGKT+QAIAIA     EE  +L+V P
Sbjct: 29  LPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIA-YFYKEEWPLLIVVP 88

Query: 255 AVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFP--KIVVISYTML----QRLR 314
           + LR+ W EELE+W+P   P +I++V    D    + + P  ++ V+ Y +L    + L 
Sbjct: 89  SSLRYPWIEELEKWIPELEPEEINVVMNKTD----IGRIPGSRVTVLGYGLLTTDAETLL 148

Query: 315 KSIFQQKWSLLIVDESHHVR 329
            ++  Q + ++IVDESH+++
Sbjct: 149 DALNTQNFRVVIVDESHYMK 163

[Close]
BLAST of CSPI01G02620 vs. Swiss-Prot
Match: ZRAB3_HUMAN (DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens GN=ZRANB3 PE=1 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 5.6e-24
Identity = 60/144 (41.67%), Postives = 90/144 (62.50%), Query Frame = 1 

Query: 189 EELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEGS 248
           + L+  LP+RL  +LLPFQ DGI F L+R GRC++ADEMGLGKT+QAI I      EE  
Sbjct: 23  DNLLDFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGIT-YFYKEEWP 82

Query: 249 ILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVISYTMLQRLR 308
           +L+V P+ LR+ W EE+E+W+P   P +I+++    D         K+ V+ Y +L    
Sbjct: 83  LLIVVPSSLRYPWTEEIEKWIPELSPEEINVIQNKTD--VRRMSTSKVTVLGYGLLTADA 142

Query: 309 KSIF----QQKWSLLIVDESHHVR 329
           K++      Q + ++IVDESH+++
Sbjct: 143 KTLIDALNNQNFKVVIVDESHYMK 163

[Close]
BLAST of CSPI01G02620 vs. Swiss-Prot
Match: ZRAB3_BOVIN (DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus GN=ZRANB3 PE=3 SV=3)

HSP 1 Score: 111.3 bits (277), Expect = 2.1e-23
Identity = 59/138 (42.75%), Postives = 89/138 (64.49%), Query Frame = 1 

Query: 195 LPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEGSILVVCP 254
           LP++L  +LLPFQ DGI F L+R GRC++ADEMGLGKT+QAI IA     EE  +L+V P
Sbjct: 29  LPDKLRAKLLPFQKDGITFALRRDGRCMVADEMGLGKTVQAIGIA-YFYKEEWPLLIVVP 88

Query: 255 AVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVISYTML----QRLRKS 314
           + LR+ W EE+E+W+P   P +I+++    D         K+ V+ Y +L    + L  +
Sbjct: 89  SSLRYPWTEEIEKWIPELSPEEINVIQNKTD--VGRISTSKVTVLGYGLLTTDAETLIDA 148

Query: 315 IFQQKWSLLIVDESHHVR 329
           +  Q + ++IVDESH+++
Sbjct: 149 LNNQNFKVVIVDESHYMK 163

[Close]
BLAST of CSPI01G02620 vs. Swiss-Prot
Match: SMAL1_XENLA (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Xenopus laevis GN=smarcal1 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 64/201 (31.84%), Postives = 113/201 (56.22%), Query Frame = 1 

Query: 132 YKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRPEHLSDEKVEEL 191
           + L DY  +++ ++N + ++VE +P     V++  +  F            +S  ++E++
Sbjct: 396 FMLEDYQKLMESVRNIQQVEVEPLPRP---VLQAFAPQFEKTT--------ISLAEIEDV 455

Query: 192 -MKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEGSIL 251
            +  +  +L+  L+PFQ DG+ F + R GR L+AD+MGLGKT+QAI IA     +E  +L
Sbjct: 456 DLSHVDSKLIGNLMPFQRDGVNFAISREGRLLLADDMGLGKTIQAICIA-AYYRKEWPLL 515

Query: 252 VVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVISYTMLQRLRKS 311
           VV P+ +RF+WAE   RWLP   P  ++++    D+         I +IS+ +L ++ K 
Sbjct: 516 VVAPSSVRFTWAEAFHRWLPSLNPESVNVIVTGRDS----QSANLINIISFDLLGKMDKQ 575

Query: 312 IFQQKWSLLIVDESHHVRCAK 332
           I    + ++I+DESH ++  K
Sbjct: 576 I-AANFKVIIIDESHFLKNVK 579

[Close]
BLAST of CSPI01G02620 vs. Swiss-Prot
Match: SMAL1_XENTR (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 OS=Xenopus tropicalis GN=smarcal1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-22
Identity = 63/200 (31.50%), Postives = 113/200 (56.50%), Query Frame = 1 

Query: 132 YKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRPEHLSDEKVEEL 191
           + L DY  +++ ++N + ++VE +P     V++  +  F        +   + +E  E  
Sbjct: 378 FMLEDYQKLMESVRNIQQVEVEPLPRP---VLQAFAPQFG-------KTTIIREEIPEVD 437

Query: 192 MKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEGSILV 251
           + ++  +L + L+PFQ DG+ F + R GR L+AD+MGLGKT+QAI IA     +E  +LV
Sbjct: 438 LSQVDSKLGSNLMPFQRDGVNFAVSREGRLLLADDMGLGKTIQAICIA-AYYRKEWPLLV 497

Query: 252 VCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVISYTMLQRLRKSI 311
           V P+ +RF+WAE  +RWLP   P  ++++    D+         I ++S+ +L ++ K I
Sbjct: 498 VAPSSVRFTWAEAFQRWLPSIRPESVNVIVTGRDS----QSASLINIVSFDLLGKMDKQI 557

Query: 312 FQQKWSLLIVDESHHVRCAK 332
               + ++I+DESH ++  K
Sbjct: 558 -AATFQVIIIDESHFLKNVK 561

[Close]
BLAST of CSPI01G02620 vs. TrEMBL
Match: A0A0A0LPG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011550 PE=4 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 1.3e-197
Identity = 337/338 (99.70%), Postives = 338/338 (100.00%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS 60
           MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS
Sbjct: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS 60

Query: 61  KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY 120
           KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY
Sbjct: 61  KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY 120

Query: 121 TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP 180
           TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP
Sbjct: 121 TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP 180

Query: 181 EHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC 240
           EHLSDEKVEELMKKLP+RLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC
Sbjct: 181 EHLSDEKVEELMKKLPDRLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC 240

Query: 241 CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS 300
           CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS
Sbjct: 241 CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS 300

Query: 301 YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE
Sbjct: 301 YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 338

[Close]
BLAST of CSPI01G02620 vs. TrEMBL
Match: M5W9M5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024990mg PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.5e-134
Identity = 239/345 (69.28%), Postives = 279/345 (80.87%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTI--- 60
           M+ITEEQRKRAEANRLAA+ KRKAL ESSN Q Q H PW LFKCRK S +  ++ T    
Sbjct: 1   MEITEEQRKRAEANRLAALEKRKALSESSNLQ-QQHNPWSLFKCRKLSPDLTSNVTHCIS 60

Query: 61  ----QSSKSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLS 120
               + S+   + NT L  +FRVRLEICSPDSFS TP  V+G  +PG E C R LSD L+
Sbjct: 61  DPRPELSRVNLIINTQLLTRFRVRLEICSPDSFSATPVAVQGFAFPGHEECLRRLSDILA 120

Query: 121 NVTHSHYTQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSG 180
            V  SHYTQ  GGGKACVYKL DY ++LKCL+++K ID EEIPW T NVVERLSHSF SG
Sbjct: 121 YVMPSHYTQNHGGGKACVYKLSDYNAVLKCLRSNKGIDTEEIPWGTLNVVERLSHSFISG 180

Query: 181 RWMPCRPEHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTL 240
           +W+PCRPEHLSD+KV+EL+ KLP+ LL+ LLPFQLDG+RFGLQRGGRCLIADEMGLGKTL
Sbjct: 181 KWIPCRPEHLSDDKVDELIGKLPKNLLDALLPFQLDGVRFGLQRGGRCLIADEMGLGKTL 240

Query: 241 QAIAIACCLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKF 300
           QAIAIACC M E GSILVVCPA+LR++WAEELERWLPFCLP+D HLVFGH +NP +L ++
Sbjct: 241 QAIAIACCFMSE-GSILVVCPAILRYTWAEELERWLPFCLPADFHLVFGHENNPANLKRW 300

Query: 301 PKIVVISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           P++VVISYTML RL KS+  ++W+LLIVDESHHVRC KK+SEP E
Sbjct: 301 PRVVVISYTMLHRLHKSMLDREWALLIVDESHHVRCTKKASEPRE 343

[Close]
BLAST of CSPI01G02620 vs. TrEMBL
Match: V4T181_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018579mg PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 3.6e-131
Identity = 232/338 (68.64%), Postives = 276/338 (81.66%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS 60
           M+ITEEQR+RAEANRLAA+AKRKAL++S+       + W+L KCRKFSTE   +   +S+
Sbjct: 1   MEITEEQRQRAEANRLAALAKRKALLQSATTASNRQDAWRLSKCRKFSTE--PAHFPKSA 60

Query: 61  KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY 120
            +   + T LPE FRVRLEICSPDSFS+TP  +EG  YPGEE C R L   LS+V  SHY
Sbjct: 61  LADPNSTTQLPENFRVRLEICSPDSFSVTPLAIEGFVYPGEEECLRRLGQWLSDVMPSHY 120

Query: 121 TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP 180
           TQ   GGKACVYKLRDY  +L CLKNS  I+VE IPW T NVVE+LSHS  +GRW PCRP
Sbjct: 121 TQNNSGGKACVYKLRDYNPVLTCLKNSAGIEVEGIPWVTLNVVEKLSHSIDTGRWNPCRP 180

Query: 181 EHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC 240
           EHLSDE V+E++ KLP+ LL+ +LPFQL+G+RFGL+RGGRCLIADEMGLGKTLQAIAIA 
Sbjct: 181 EHLSDEVVDEMIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAA 240

Query: 241 CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS 300
           C +   GSILVVCPA+LR SWAEELERWLPFCLP+DIHLVFGH +NP HL++FP++VVIS
Sbjct: 241 CFI-SAGSILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVIS 300

Query: 301 YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           YTML RLRKS+ +Q+W+LLIVDESHHVRC+K++SEPEE
Sbjct: 301 YTMLHRLRKSMIEQEWALLIVDESHHVRCSKRTSEPEE 335

[Close]
BLAST of CSPI01G02620 vs. TrEMBL
Match: A0A067ETM0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001912mg PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.4e-130
Identity = 234/339 (69.03%), Postives = 272/339 (80.24%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS 60
           M+ITEEQR+RAEANRLAA+AKRKAL +S+       + W+L KCRKFSTE    T    S
Sbjct: 1   MEITEEQRQRAEANRLAALAKRKALQQSATTASNRQDAWRLSKCRKFSTE---PTHFPKS 60

Query: 61  KSLTVNNT-HLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSH 120
                N+T  LPE FRVRLEICSPDSFS+TP  +EG  YPGEE C R L   LS+V  SH
Sbjct: 61  ALADPNSTTQLPENFRVRLEICSPDSFSVTPLAIEGFVYPGEEECLRRLGQWLSDVMPSH 120

Query: 121 YTQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCR 180
           YTQ   GGKACVYKLRDY  +L CLKNS  I+VE IPW T NVVE+LSHS  +GRW PCR
Sbjct: 121 YTQNNSGGKACVYKLRDYNPVLTCLKNSAGIEVEGIPWVTLNVVEKLSHSIDTGRWNPCR 180

Query: 181 PEHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIA 240
           PEHLSDE V+E++ KLP+ LL+ +LPFQL+G+RFGL+RGGRCLIADEMGLGKTLQAIAIA
Sbjct: 181 PEHLSDEVVDEMIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIA 240

Query: 241 CCLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVI 300
            C +   GSILVVCPA+LR SWAEELERWLPFCLP+DIHLVFGH +NP HL++FP++VVI
Sbjct: 241 ACFI-SAGSILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVI 300

Query: 301 SYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           SYTML RLRKS+ +Q W+LLIVDESHHVRC+K++SEPEE
Sbjct: 301 SYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEE 335

[Close]
BLAST of CSPI01G02620 vs. TrEMBL
Match: A0A0B0P472_GOSAR (Zinc finger Ran-binding domain-containing 3 OS=Gossypium arboreum GN=F383_26928 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 1.9e-127
Identity = 226/343 (65.89%), Postives = 276/343 (80.47%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEP----WKLFKCRKFSTE-FDAST 60
           M +TEE+RK+AEANRLAAIAKRKAL++SS+  +   E     W+L KC K + +      
Sbjct: 1   MKLTEEERKQAEANRLAAIAKRKALLQSSSANIHCQENQSHYWRLAKCPKLANDNAQIPK 60

Query: 61  TIQSSKSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNV 120
             Q SKS+ V++T L +KF+ RLEICSPD+FSITPE ++GC YPG+E C R L D LS+V
Sbjct: 61  RPQDSKSMPVSSTQLSKKFQARLEICSPDTFSITPETLKGCLYPGDEECLRRLGDVLSDV 120

Query: 121 THSHYTQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRW 180
            HSHYTQ  GG KACVYKLRDY S+L CL+ SKDI++ EIP  T  VVE  SH F +G+W
Sbjct: 121 MHSHYTQDSGGRKACVYKLRDYGSVLSCLRKSKDIEIREIPHLTLKVVETFSHCFVAGQW 180

Query: 181 MPCRPEHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQA 240
            PCRPEHLSDE V+EL+ KLPE LLN LLPFQL+GI+FGL+RGGRCLIADEMGLGKTLQA
Sbjct: 181 RPCRPEHLSDEDVDELITKLPETLLNSLLPFQLEGIKFGLRRGGRCLIADEMGLGKTLQA 240

Query: 241 IAIACCLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPK 300
           IAIA C ++ EGSILVVCPAVLR+SWAEELERWL FCLPSDIHLVFGH DNP +L+K+P+
Sbjct: 241 IAIAGCFIN-EGSILVVCPAVLRYSWAEELERWLSFCLPSDIHLVFGHRDNPAYLNKYPR 300

Query: 301 IVVISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           +VVISYTML+ LRKS+ + +W+++IVDESHH+RC++KS+E  E
Sbjct: 301 VVVISYTMLKHLRKSMLEHEWAVIIVDESHHLRCSRKSTESAE 342

[Close]
BLAST of CSPI01G02620 vs. TAIR10
Match: AT5G07810.1 (AT5G07810.1 SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein)

HSP 1 Score: 407.5 bits (1046), Expect = 8.1e-114
Identity = 202/340 (59.41%), Postives = 254/340 (74.71%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTT--IQ 60
           M+++EEQR+R EA RLA   KRK   +SS    Q  + ++L KCRK     D       +
Sbjct: 1   MEVSEEQRRRDEATRLAFAEKRKQSFDSSENP-QRQQDFRLAKCRKLDGSNDVCPQEGYR 60

Query: 61  SSKSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHS 120
           + + + V +T +PEKFRVRLEICSPDSFS+TP  ++G   P E+ C R L   LS+    
Sbjct: 61  NYEPVRVLSTSVPEKFRVRLEICSPDSFSVTPVQLQGFRCPEEQECLRQLRKILSDAIPL 120

Query: 121 HYTQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPC 180
           HYTQ   GGKA VYK+RDY  +  CLK SK ++VE +PW T  VVE+LS S+ SG+W PC
Sbjct: 121 HYTQNDDGGKAGVYKIRDYNKVSGCLKRSKSVEVEGVPWKTLAVVEKLSQSYISGKWQPC 180

Query: 181 RPEHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAI 240
            PEH ++EKVE+L++ LP +L+N LLPFQLDG+RFGL+RGGRC IADEMGLGKTLQAIAI
Sbjct: 181 LPEHYTEEKVEQLIETLPRKLVNALLPFQLDGLRFGLRRGGRCFIADEMGLGKTLQAIAI 240

Query: 241 ACCLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVV 300
           A C +  EGSILVVCPAVLRF+WAEELERWLP CLPSD+HLVFGH DNP +L ++PK+VV
Sbjct: 241 AGCFI-SEGSILVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPRWPKVVV 300

Query: 301 ISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           ISY MLQ LR ++ +++W+LLIVDESHH+RC+KK S+P E
Sbjct: 301 ISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPE 338

[Close]
BLAST of CSPI01G02620 vs. TAIR10
Match: AT1G48310.1 (AT1G48310.1 chromatin remodeling factor18)

HSP 1 Score: 95.9 bits (237), Expect = 5.2e-20
Identity = 61/156 (39.10%), Postives = 86/156 (55.13%), Query Frame = 1 

Query: 188 VEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIACCLMDEEG 247
           +  L +K+P  +  +LLPFQ +GI F LQ GGR L+ADEMGLGKTLQAIA+  C + E  
Sbjct: 157 LRHLYEKIPSHIEPKLLPFQREGIEFILQHGGRVLLADEMGLGKTLQAIAVTTC-VQESW 216

Query: 248 SILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHL--DNPC-------------HLSK 307
            +L++ P+ LR  WA  + +WL    PSDI +V       N C             HL  
Sbjct: 217 PVLIIAPSSLRLHWATMIHQWL-HVPPSDIVVVLPQPGGSNKCGFTIVSSNTKGTIHLDG 276

Query: 308 FPKIVVISYTMLQRLRKSIFQQKWSLLIVDESHHVR 329
              IV  SY ++ +L K +    + ++I DESH ++
Sbjct: 277 VFNIV--SYDVVTKLDKLLMALDFKVVIADESHFLK 308

[Close]
BLAST of CSPI01G02620 vs. TAIR10
Match: AT2G02090.1 (AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein)

HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11
Identity = 58/211 (27.49%), Postives = 102/211 (48.34%), Query Frame = 1 

Query: 139 SILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRPEHLSDEKVEELMKKLPER 198
           ++ KC K S D+  +E+  T+  V +R S   +S          ++   +++  K     
Sbjct: 156 ALQKCAKISADLR-KELYGTSSGVTDRYSEVETS------TVRIVTQNDIDDACKAEDSD 215

Query: 199 LLNRLLPFQLDGIRFGL---QRGGR-CLIADEMGLGKTLQAI---AIACCLMDEEGSILV 258
               L P+QL G+ F L   ++G    ++ADEMGLGKT+QAI    +   L ++ G  LV
Sbjct: 216 FQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLV 275

Query: 259 VCPAVLRFSWAEELERWLPFCLPSDIH-----LVFGHLDNPCHLSKFP--KIVVISYTML 318
           VCPA +  +W  EL +W P       H          L++     K P   ++++ Y++ 
Sbjct: 276 VCPASVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKAGKPPPFNVLLVCYSLF 335

Query: 319 QRL-------RKSIFQQKWSLLIVDESHHVR 329
           +R        RK + + +WS +++DE+H ++
Sbjct: 336 ERHSEQQKDDRKVLKRWRWSCVLMDEAHALK 359

[Close]
BLAST of CSPI01G02620 vs. TAIR10
Match: AT4G31900.1 (AT4G31900.1 chromatin remodeling factor, putative)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 52/186 (27.96%), Postives = 86/186 (46.24%), Query Frame = 1 

Query: 161 NVVERLSHSFSSGRWMPCRPEHLSDEKVEELMKKL---PERLLNRLLPFQLDGI---RFG 220
           N ++R     SS R    R +++ +E+  E  K+    PE L   L  +QL+G+   R+ 
Sbjct: 184 NEIQRFKDINSSSR----RDKYVENERNREEFKQFDLTPEFLTGTLHTYQLEGLNFLRYS 243

Query: 221 LQRGGRCLIADEMGLGKTLQAIAIACCLMDEEGS-ILVVCPAVLRFSWAEELERWLP--- 280
             +    ++ADEMGLGKT+Q+IA    L +E  S  LVV P     +W  E   W P   
Sbjct: 244 WSKKTNVILADEMGLGKTIQSIAFLASLFEENLSPHLVVAPLSTIRNWEREFATWAPHMN 303

Query: 281 -FCLPSDIHLVFGHLDNPCHLSKFPK----IVVISYTMLQRLRKSIFQQKWSLLIVDESH 332
                 D        ++  + S+  K    +++ +Y M+      +   KW+ +I+DE H
Sbjct: 304 VVMYTGDSEARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGH 363

[Close]
BLAST of CSPI01G02620 vs. TAIR10
Match: AT2G28290.1 (AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-09
Identity = 44/163 (26.99%), Postives = 79/163 (48.47%), Query Frame = 1 

Query: 182 HLSDEKVEELMKKLPERLLN-RLLPFQLDGIRFGLQRGGRC---LIADEMGLGKTLQAIA 241
           +L    ++E + + P  L+  +L  +Q++G+R+ +         ++ADEMGLGKT+Q I+
Sbjct: 732 YLMAHSIKENINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVIS 791

Query: 242 IACCLMD---EEGSILVVCPAVLRFSWAEELERWLP------FC-LPSDIHLVFGHLDNP 301
           + C LM+   + G  LVV P+ +   W  E+  W P      +C  P +   +F   +  
Sbjct: 792 LICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLF--KEQI 851

Query: 302 CHLSKFPKIVVISYTMLQRLRKSIFQQKWSLLIVDESHHVRCA 331
            H      +    Y M +  R  + +  W  +I+DE H ++ A
Sbjct: 852 VHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNA 892

[Close]
BLAST of CSPI01G02620 vs. NCBI nr
Match: gi|778656021|ref|XP_011660248.1| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Cucumis sativus])

HSP 1 Score: 696.8 bits (1797), Expect = 1.9e-197
Identity = 337/338 (99.70%), Postives = 338/338 (100.00%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS 60
           MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS
Sbjct: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS 60

Query: 61  KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY 120
           KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY
Sbjct: 61  KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY 120

Query: 121 TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP 180
           TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP
Sbjct: 121 TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP 180

Query: 181 EHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC 240
           EHLSDEKVEELMKKLP+RLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC
Sbjct: 181 EHLSDEKVEELMKKLPDRLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC 240

Query: 241 CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS 300
           CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS
Sbjct: 241 CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS 300

Query: 301 YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE
Sbjct: 301 YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 338

[Close]
BLAST of CSPI01G02620 vs. NCBI nr
Match: gi|659106035|ref|XP_008453234.1| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Cucumis melo])

HSP 1 Score: 673.3 bits (1736), Expect = 2.2e-190
Identity = 324/338 (95.86%), Postives = 330/338 (97.63%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTIQSS 60
           MDITEEQRKRAEANRLAAIAKRKAL+ESSNGQLQHH+PWKLFKCRKFSTEFDASTTIQSS
Sbjct: 1   MDITEEQRKRAEANRLAAIAKRKALIESSNGQLQHHDPWKLFKCRKFSTEFDASTTIQSS 60

Query: 61  KSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLSNVTHSHY 120
           K LT NNTH PEKFRVRLEICSPDSFSITPEVVEGCFYPGE+NCFRILSDCLSNVTHSHY
Sbjct: 61  KILTDNNTHWPEKFRVRLEICSPDSFSITPEVVEGCFYPGEDNCFRILSDCLSNVTHSHY 120

Query: 121 TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP 180
           TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP
Sbjct: 121 TQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSGRWMPCRP 180

Query: 181 EHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTLQAIAIAC 240
           EH SDEKV+ELMKKLP+RL NRLLPFQLDG+RFGLQRGGRCLIADEMGLGKTLQAIAIA 
Sbjct: 181 EHFSDEKVDELMKKLPDRLRNRLLPFQLDGVRFGLQRGGRCLIADEMGLGKTLQAIAIAS 240

Query: 241 CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS 300
           CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS
Sbjct: 241 CLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKFPKIVVIS 300

Query: 301 YTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           YTML RLRKSI QQKWSLLIVDESHHVRCAKKSSEPEE
Sbjct: 301 YTMLHRLRKSILQQKWSLLIVDESHHVRCAKKSSEPEE 338

[Close]
BLAST of CSPI01G02620 vs. NCBI nr
Match: gi|1009132429|ref|XP_015883374.1| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Ziziphus jujuba])

HSP 1 Score: 493.8 bits (1270), Expect = 2.4e-136
Identity = 242/348 (69.54%), Postives = 283/348 (81.32%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHH--EPWKLFKCRKFSTEFDASTTIQ 60
           M+ TEEQRKRAEANRLAA+AKRKAL+ESS+ Q  +H  + WKLFKC K S E   + T  
Sbjct: 1   MEFTEEQRKRAEANRLAALAKRKALLESSSQQQHNHHSDHWKLFKCPKVSRELSPTATGL 60

Query: 61  SSKSLTVNN--------THLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSD 120
           S  S             THLP+ FRVRLEICSPDSFS+TP  + G  YPGEE C R LSD
Sbjct: 61  SFSSQLPKTDMKNLDSYTHLPKSFRVRLEICSPDSFSVTPLALRGSSYPGEEECLRRLSD 120

Query: 121 CLSNVTHSHYTQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSF 180
           CLSNV  SHYTQ  GGGKACVYKL DY  +LKCLK++K++ VEEIPWTTFNV+E+ SHSF
Sbjct: 121 CLSNVMPSHYTQNHGGGKACVYKLSDYGMVLKCLKSNKNVAVEEIPWTTFNVIEKFSHSF 180

Query: 181 SSGRWMPCRPEHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLG 240
            +GRW+PC+ EHLSD+KV+EL+ KLP+ LL+ LLPFQLDG++F L+RGGRCLIADEMGLG
Sbjct: 181 VAGRWIPCKQEHLSDDKVDELIGKLPKTLLDALLPFQLDGVKFCLRRGGRCLIADEMGLG 240

Query: 241 KTLQAIAIACCLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHL 300
           KTLQAIAIACC M  EGSILVVCPA+LRFSWAEELERW+PFCLP+DIHLVFGH +NP +L
Sbjct: 241 KTLQAIAIACCFM-SEGSILVVCPAILRFSWAEELERWVPFCLPADIHLVFGHQNNPANL 300

Query: 301 SKFPKIVVISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
            +FP++VVISYTML RLRKS+ +Q+W+LLIVDESHHVRC KK+SEP E
Sbjct: 301 RRFPRVVVISYTMLHRLRKSMLEQEWALLIVDESHHVRCTKKASEPGE 347

[Close]
BLAST of CSPI01G02620 vs. NCBI nr
Match: gi|595844840|ref|XP_007208817.1| (hypothetical protein PRUPE_ppa024990mg [Prunus persica])

HSP 1 Score: 486.1 bits (1250), Expect = 5.1e-134
Identity = 239/345 (69.28%), Postives = 279/345 (80.87%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTI--- 60
           M+ITEEQRKRAEANRLAA+ KRKAL ESSN Q Q H PW LFKCRK S +  ++ T    
Sbjct: 1   MEITEEQRKRAEANRLAALEKRKALSESSNLQ-QQHNPWSLFKCRKLSPDLTSNVTHCIS 60

Query: 61  ----QSSKSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLS 120
               + S+   + NT L  +FRVRLEICSPDSFS TP  V+G  +PG E C R LSD L+
Sbjct: 61  DPRPELSRVNLIINTQLLTRFRVRLEICSPDSFSATPVAVQGFAFPGHEECLRRLSDILA 120

Query: 121 NVTHSHYTQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSG 180
            V  SHYTQ  GGGKACVYKL DY ++LKCL+++K ID EEIPW T NVVERLSHSF SG
Sbjct: 121 YVMPSHYTQNHGGGKACVYKLSDYNAVLKCLRSNKGIDTEEIPWGTLNVVERLSHSFISG 180

Query: 181 RWMPCRPEHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTL 240
           +W+PCRPEHLSD+KV+EL+ KLP+ LL+ LLPFQLDG+RFGLQRGGRCLIADEMGLGKTL
Sbjct: 181 KWIPCRPEHLSDDKVDELIGKLPKNLLDALLPFQLDGVRFGLQRGGRCLIADEMGLGKTL 240

Query: 241 QAIAIACCLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKF 300
           QAIAIACC M E GSILVVCPA+LR++WAEELERWLPFCLP+D HLVFGH +NP +L ++
Sbjct: 241 QAIAIACCFMSE-GSILVVCPAILRYTWAEELERWLPFCLPADFHLVFGHENNPANLKRW 300

Query: 301 PKIVVISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           P++VVISYTML RL KS+  ++W+LLIVDESHHVRC KK+SEP E
Sbjct: 301 PRVVVISYTMLHRLHKSMLDREWALLIVDESHHVRCTKKASEPRE 343

[Close]
BLAST of CSPI01G02620 vs. NCBI nr
Match: gi|645269386|ref|XP_008239974.1| (PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Prunus mume])

HSP 1 Score: 484.2 bits (1245), Expect = 1.9e-133
Identity = 237/345 (68.70%), Postives = 278/345 (80.58%), Query Frame = 1 

Query: 1   MDITEEQRKRAEANRLAAIAKRKALVESSNGQLQHHEPWKLFKCRKFSTEFDASTTI--- 60
           M+ITEEQRKRAEAN LAA+ KRKAL ESSN Q Q H PW LFKCRK S +  ++ T    
Sbjct: 1   MEITEEQRKRAEANLLAALEKRKALSESSNLQ-QQHNPWSLFKCRKLSPDLTSNVTHCIS 60

Query: 61  ----QSSKSLTVNNTHLPEKFRVRLEICSPDSFSITPEVVEGCFYPGEENCFRILSDCLS 120
               + S    + NT LP +FRVRLEICSPDSFS TP  V+G  +PG+E C R LSD L+
Sbjct: 61  DPRPELSHVNLIINTQLPTRFRVRLEICSPDSFSATPVAVQGFAFPGQEECLRRLSDILA 120

Query: 121 NVTHSHYTQIIGGGKACVYKLRDYCSILKCLKNSKDIDVEEIPWTTFNVVERLSHSFSSG 180
            V  SHYTQ  GGGKACVYKL DY ++LKCL+++K ID EEIPW T NVVERLSHSF SG
Sbjct: 121 YVMPSHYTQNHGGGKACVYKLSDYNAVLKCLRSNKGIDTEEIPWGTLNVVERLSHSFISG 180

Query: 181 RWMPCRPEHLSDEKVEELMKKLPERLLNRLLPFQLDGIRFGLQRGGRCLIADEMGLGKTL 240
           +W+PCRPEHLSD+KV+EL+ KLP+ LL+ LLPFQ DG+RFGLQRGGRCLIADEMGLGKTL
Sbjct: 181 KWIPCRPEHLSDDKVDELIGKLPKNLLDALLPFQFDGVRFGLQRGGRCLIADEMGLGKTL 240

Query: 241 QAIAIACCLMDEEGSILVVCPAVLRFSWAEELERWLPFCLPSDIHLVFGHLDNPCHLSKF 300
           QAIAIACC M E GSILVVCPA+LR++WAEELERWLPFCLP+D HLVFGH +NP +L ++
Sbjct: 241 QAIAIACCFMSE-GSILVVCPAILRYTWAEELERWLPFCLPADFHLVFGHENNPANLKRW 300

Query: 301 PKIVVISYTMLQRLRKSIFQQKWSLLIVDESHHVRCAKKSSEPEE 339
           P++VVISYTML RL +S+  ++W+LLIVDESHHVRC KK+SEP E
Sbjct: 301 PRVVVISYTMLHRLHRSMLDREWALLIVDESHHVRCTKKASEPRE 343

The following BLAST results are available for this feature:
BLAST of CSPI01G02620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZRAB3_MOUSE1.1e-2444.29DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus GN=Zranb3 PE=1 SV... [more]
ZRAB3_HUMAN5.6e-2441.67DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens GN=ZRANB3 PE=1 SV... [more]
ZRAB3_BOVIN2.1e-2342.75DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus GN=ZRANB3 PE=3 SV=3[more]
SMAL1_XENLA1.1e-2231.84SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
SMAL1_XENTR1.4e-2231.50SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami... [more]
BLAST of CSPI01G02620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPG8_CUCSA1.3e-19799.70Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011550 PE=4 SV=1[more]
M5W9M5_PRUPE3.5e-13469.28Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024990mg PE=4 SV=1[more]
V4T181_9ROSI3.6e-13168.64Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018579mg PE=4 SV=1[more]
A0A067ETM0_CITSI1.4e-13069.03Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001912mg PE=4 SV=1[more]
A0A0B0P472_GOSAR1.9e-12765.89Zinc finger Ran-binding domain-containing 3 OS=Gossypium arboreum GN=F383_26928 ... [more]
BLAST of CSPI01G02620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07810.18.1e-11459.41 SNF2 domain-containing protein / helicase domain-containing protein ... [more]
AT1G48310.15.2e-2039.10 chromatin remodeling factor18[more]
AT2G02090.13.4e-1127.49 SNF2 domain-containing protein / helicase domain-containing protein[more]
AT4G31900.11.4e-0927.96 chromatin remodeling factor, putative[more]
AT2G28290.11.4e-0926.99 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of CSPI01G02620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778656021|ref|XP_011660248.1|1.9e-19799.70PREDICTED: DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Cucumis sa... [more]
gi|659106035|ref|XP_008453234.1|2.2e-19095.86PREDICTED: DNA annealing helicase and endonuclease ZRANB3 isoform X1 [Cucumis me... [more]
gi|1009132429|ref|XP_015883374.1|2.4e-13669.54PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Ziziphus jujuba][more]
gi|595844840|ref|XP_007208817.1|5.1e-13469.28hypothetical protein PRUPE_ppa024990mg [Prunus persica][more]
gi|645269386|ref|XP_008239974.1|1.9e-13368.70PREDICTED: DNA annealing helicase and endonuclease ZRANB3 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G02620.1CSPI01G02620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 221..333
score: 9.0
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 199..344
score: 4.
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 212..345
score: 13
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 189..328
score: 3.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 181..327
score: 9.39
NoneNo IPR availableunknownCoilCoilcoord: 3..23
scor
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 190..332
score: 2.3
NoneNo IPR availablePANTHERPTHR10799:SF741HELICASE PROTEIN MOM1-RELATEDcoord: 190..332
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G02620Cla019081Watermelon (97103) v1cpiwmB099
CSPI01G02620Csa1G011550Cucumber (Chinese Long) v2cpicuB000
CSPI01G02620MELO3C017203Melon (DHL92) v3.5.1cpimeB055
CSPI01G02620ClCG06G015870Watermelon (Charleston Gray)cpiwcgB083
CSPI01G02620Lsi06G014360Bottle gourd (USVL1VR-Ls)cpilsiB070
CSPI01G02620MELO3C017204.2Melon (DHL92) v3.6.1cpimedB049
CSPI01G02620CsaV3_1G002690Cucumber (Chinese Long) v3cpicucB001
CSPI01G02620Cla97C06G125440Watermelon (97103) v2cpiwmbB079
CSPI01G02620Bhi02G000188Wax gourdcpiwgoB098
CSPI01G02620Cucsa.198010Cucumber (Gy14) v1cgycpiB310
CSPI01G02620CmaCh10G002200Cucurbita maxima (Rimu)cmacpiB049
CSPI01G02620CmoCh10G002310Cucurbita moschata (Rifu)cmocpiB040
CSPI01G02620Cp4.1LG18g07750Cucurbita pepo (Zucchini)cpecpiB361
CSPI01G02620CsGy1G002670Cucumber (Gy14) v2cgybcpiB001
CSPI01G02620Carg17941Silver-seed gourdcarcpiB0499
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G02620Melon (DHL92) v3.6.1cpimedB005
CSPI01G02620Melon (DHL92) v3.6.1cpimedB028
CSPI01G02620Cucumber (Gy14) v2cgybcpiB004
CSPI01G02620Silver-seed gourdcarcpiB0057
CSPI01G02620Silver-seed gourdcarcpiB0420
CSPI01G02620Cucumber (Chinese Long) v3cpicucB003
CSPI01G02620Cucumber (Chinese Long) v3cpicucB044
CSPI01G02620Watermelon (97103) v2cpiwmbB056
CSPI01G02620Watermelon (97103) v2cpiwmbB063
CSPI01G02620Wax gourdcpiwgoB053
CSPI01G02620Wax gourdcpiwgoB071
CSPI01G02620Wild cucumber (PI 183967)cpicpiB000
CSPI01G02620Wild cucumber (PI 183967)cpicpiB029
CSPI01G02620Cucumber (Gy14) v1cgycpiB138
CSPI01G02620Cucumber (Gy14) v1cgycpiB427
CSPI01G02620Cucurbita maxima (Rimu)cmacpiB098
CSPI01G02620Cucurbita maxima (Rimu)cmacpiB226
CSPI01G02620Cucurbita maxima (Rimu)cmacpiB432
CSPI01G02620Cucurbita maxima (Rimu)cmacpiB693
CSPI01G02620Cucurbita moschata (Rifu)cmocpiB079
CSPI01G02620Cucurbita moschata (Rifu)cmocpiB212
CSPI01G02620Cucurbita moschata (Rifu)cmocpiB422
CSPI01G02620Cucumber (Chinese Long) v2cpicuB005
CSPI01G02620Cucumber (Chinese Long) v2cpicuB037
CSPI01G02620Melon (DHL92) v3.5.1cpimeB005
CSPI01G02620Melon (DHL92) v3.5.1cpimeB026
CSPI01G02620Watermelon (Charleston Gray)cpiwcgB060
CSPI01G02620Watermelon (Charleston Gray)cpiwcgB066
CSPI01G02620Watermelon (97103) v1cpiwmB039
CSPI01G02620Watermelon (97103) v1cpiwmB067
CSPI01G02620Cucurbita pepo (Zucchini)cpecpiB512
CSPI01G02620Cucurbita pepo (Zucchini)cpecpiB538
CSPI01G02620Cucurbita pepo (Zucchini)cpecpiB656
CSPI01G02620Bottle gourd (USVL1VR-Ls)cpilsiB024
CSPI01G02620Bottle gourd (USVL1VR-Ls)cpilsiB055