CSPI01G01920 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAAACTAAAAATAAGGTTGAGTTTGTTCTTTGAAATGTGAAAGGTAATATTTTAAAATTTAAAAATAGTGTATATGAAATAAACATTAGAGAAGTGAGATGGAATTTTTAGCCTCATAAAAGCTTCTATCTTTTCACTCTTCCTTTGAGTCAAAAATTACAGGCGAGTGAGAGAAATGGAAGCTCGTAGCACAGTGTGCGCCACTGCCTAAAAAGATCACAGTATCTCTCTCCTTCTCGTCGCATAGCAAAGCTTCTCTCGGACCCCATCCCAAAACCCAATCCCTTCTCTTCCCTTCCCCAAAGTAGCTTCATAAATAACGTCTTCACTACCTACACTTTGACTCCAATTCTGAATCCCCATCTTCAAATTCATACCCCAAACCTCTTCGATTCCTCTCCGCTAGTCCCACATTGACATTTGATTTTGATCCCTTGTGAATTACTGCTTCTGGGTCATTTGGGTCAGCGGAAATGGATCCTCCCCTTGTTAACGAATCCTCCTTTTCTGCTGCGAATCCTTCTGCTTACAGCTTGGCTTCGATTTGGCCTTTTGGGGGGGACCAGGGTGGGAGTGTATTGGGGCTTCGAATGGCTAATTTGGCTCAGAATCTTGGTGGGTTTCGTGAGTGCTCCACGAATCGTGATGGGTCAATGGAAGAATCGACAGTGACGGAGCAGAGTGGCGGTGGGAGGAAGAGGAAGGATGTGAGCTCTGAAGATGAATCTTCGAGAATGGTTTCCACTAGTAGTGCTAATCAATTGGTTAGTTTTTTTTGTTTTCTTTCTCATTTTTCCCTTTTGCTCTCAATTTGGCTACGTTGACCCAGTTTTGGACAAAAATGATACTGGTCAAATTTGTATACTGTTTGTTCGGTGTTTCACTTTTAAAAGATGGAACTCTTTTTCTTTCTTTTTTGAAGGGAGGAGCTCCCATTGAAGAGAAAACAGCTATTAATCTTTATATAACCATTATTGTTGTTCCAAGATTATCAAGAAACTTGACTTGCCCATTGATGTATGCAGTGATCATATATCTCGACACTGGCTAATTACATTTAAGCACGTTGTATTTAAAATTTTCAATCAGTTGTCAAATCTTTGACTTATTGATCAAGGTAGTAATCGCCAATTTATTTTGTACGTTCCATTTCATACAGAGTAATTCAAATGATAAACGGATGAAAGTAGTGGAATCCAGAGATGAAAATGGTGGTATAAAAGCTGAAGTAGATCCTAACTCATCAGATGGTAAGAAGCTGGCCGAGCAAAGCCCGAAACCCGAACCACCAAAAGATTACATCCATGTCAGAGCAAGAAGGGGCCAAGCTACTGATAGCCATAGTTTAGCAGAAAGAGTAATGTACTCCTCTCAGTTGTTTGGGATTTGAATATCTCAATCATTTATCAGATAGTTCTTACCATTTTTTCTAATAGCTTCAAGTTTCTGGTGGAGATTTGGACTGTTTATATGTCCATTATCCCTTACTCCCAAATTTTTGCCTGTTTGCCTTACTATAGCCTTATGTGCAGGCTAGAAGAGAGAAGATCAGTGAGAGAATGAAAATTTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTACTCTTTATCTGTTACTTTGTGTGTAAATAGCTATTGGGAGAAAGTTTAAAAAAACAACCCTGAACTGTAAGGTTAGGTACAATTTAGATTTCTGGAAACAACCCTGAACTGTAAGAGTAGGTAAAATTTAGATTTCTGACTTCTAACTTGATCAATTTTAAGGCCAATCAAATTACTGCAATGTAATCCCTGCCATTTCAAGTGCTAAACACCTGGAAACTTATTGGAGGAGCTTATGTGAGAAGATGACCACTCTCTCTCCTAAACGCTAGATTTAATTGATCTAAGATGTGAGAGGGAAGGGGTTGGTCAATTTTACGCCTAAACATGAGTGATGGTTGCAACACAGCCACTACCACTATATCCAATAAGCTTTCCTTCAAAGCCAGTACATTCTTCATTCTTTCGATGTCTGTAAAGTCAGAGAGAAAAATTGTGTAAGAAGAGGAGGAAGCAGCAAATTTGGGAGTTAAAGAGAAAAAAAGAAATGAGAACAGCGGCATGCAATGAAGTCACTGAGAAAAATAACTATTGAGAGGAAAATTTGAGAGTGGTTCAGTGGGAGTGATCTAAAAAAATTAAGAGCAGAGCACTACAACAAAGATCAATGTCTCTGAGCTTTCATTAATTGTAATTTTTACCCCAGGAAAAAGGCCAATGTTAATGGAAAAGTTGATGATGTTAGTAGGGGCATGATACATCGTAACATAAACAATTAGTCATGTTGAAGGACAAGAGTGATCAAATTAGAAATCTGGAGATTAAATTGTCATTATTCTAGTGGTTCAGGGATGAATTTTCCTAAGAATTGGGGGGATGTTAATTTTGAGTTTGGTTGCAGTCGTATTGAAAATCAAGTTCAAATTATAATTTTTCTTGCACATGCATGTTCTTCCTACCTGTTAGGTTATTGGAAAAGCACTTGTCCTTGATGAGATAATAAATTATATCCAATCACTGCAACGTCAGGTCGAGGTATATACTCTAATCCTGACTTTTTCTTTTTATTCAAAACTATTTCTTATTTAATCTGAGCTTTGTACATCTGGCTCAAATTTGTAGTTCCTCTCCATGAAACTTGAAGCTGTGAATTCCAGGATGAACATAACCCCTGGCATAGAAGGTTTTACTGTAAAAAATGTAAGTCTGATTCTCATTTCATGTATCAAGAGAAAAGCAATACAAAAAGGAGTCGGTTAGCCATTGCTGATTGGCCATCTTATCTAGATGAAAAGCATTTAATGTGGCATACTACTTCTTAAAACTCTAATTTCAAAATAGCGTAGGAAACAGGTAGATGTCCAGTTTTGATTGCTTCTTTTCACCACAACATCCACAAATTTAAACTTGGCTGGCTGTTTCTTTGTGGGCTTTATGTTTATAATTTTTTGCACCAAAGGTATCTCGCTTGTGTGCATGAGGGGCATATGATTTATTTGGTAATTAACGTAGTTGGCGACTTCACGTTGGTTCCAATGGTATAGTTTCAAGTTGCTATCCCCATCTTTAAACATTTATTTTAATAGTGGGCCAATCCATAATCTTGAAGGTTTCTTATCTTATTCTTAGTTAAATTGGCTTCACTCAAAAAATTCAGGATATAAAAGAGGTTAAAAGGATACCCAAATGTAGGGTCAAATTGTGTTGTGAGATTAGTTGCGGGGAGCTTAAGCTAGTCACTCAACTCTCCTCCGGCCTCTCTCCCTCTTCAGATGTTCTTAACACGCTCCTAGAACAACTTTCATTTTGTAGAAATCTGTTGCGATTGAATTATTTCTTAACTCTCTTATCTGACATTTCAGATCGTTAATCAACCATATGATGCAGCTGGAATATTATATGGTTCACAAGCAGCAAGAGATTATACCCAAGGTGCACAAACTGAATGGTTGCATATGCAAATCGGTGGAGGTTTTGAAAGAACGTCTTAGATCTCAATAGGCTTCTTATAATCAAATGTCAAAATTGATTTGGCTTCCTCATGATTTAGTTCAGTAGATATATATATATATTATATATATATATGTTTGATCATTTAGTATCCAATACTTGTATTATTCCCCTTAGGGACCATTCGATATAATTGGAACGATCAATTACTTGTATCATCTACAGAAATTGAACCTACTTCCAATTTGTAACTTACTGACTGATAAATCTGGACTGCAGTTGTACTGGAGAAAAAACCTACTAAGCTTCCATTACTGCTCTTAATCCTGTTTGCTGCCTAAATGGACTTGATGAATCCAAAGATATATTCACTCTCTCTTTCTGATTATTTGATCCGAAAGATTGTCTAGAAAATGTCTATAGTTTCTGCAAATTGATAGGCCAGTGGTGGTTTGACACCTTGCACTTTCTTCCATTCTCAAGAACATGGTGTAAAATTAAATTTTGGAGGAAGATAATTGAGATTTTATTAGGGGATAATTTTGTTTT ATGGATCCTCCCCTTGTTAACGAATCCTCCTTTTCTGCTGCGAATCCTTCTGCTTACAGCTTGGCTTCGATTTGGCCTTTTGGGGGGGACCAGGGTGGGAGTGTATTGGGGCTTCGAATGGCTAATTTGGCTCAGAATCTTGGTGGGTTTCGTGAGTGCTCCACGAATCGTGATGGGTCAATGGAAGAATCGACAGTGACGGAGCAGAGTGGCGGTGGGAGGAAGAGGAAGGATGTGAGCTCTGAAGATGAATCTTCGAGAATGGTTTCCACTAGTAGTGCTAATCAATTGAGTAATTCAAATGATAAACGGATGAAAGTAGTGGAATCCAGAGATGAAAATGGTGGTATAAAAGCTGAAGTAGATCCTAACTCATCAGATGGTAAGAAGCTGGCCGAGCAAAGCCCGAAACCCGAACCACCAAAAGATTACATCCATGTCAGAGCAAGAAGGGGCCAAGCTACTGATAGCCATAGTTTAGCAGAAAGAGCTAGAAGAGAGAAGATCAGTGAGAGAATGAAAATTTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTTATTGGAAAAGCACTTGTCCTTGATGAGATAATAAATTATATCCAATCACTGCAACGTCAGGTCGAGTTCCTCTCCATGAAACTTGAAGCTGTGAATTCCAGGATGAACATAACCCCTGGCATAGAAGGTTTTACTGTAAAAAATATCGTTAATCAACCATATGATGCAGCTGGAATATTATATGGTTCACAAGCAGCAAGAGATTATACCCAAGGTGCACAAACTGAATGGTTGCATATGCAAATCGGTGGAGGTTTTGAAAGAACGTCTTAG ATGGATCCTCCCCTTGTTAACGAATCCTCCTTTTCTGCTGCGAATCCTTCTGCTTACAGCTTGGCTTCGATTTGGCCTTTTGGGGGGGACCAGGGTGGGAGTGTATTGGGGCTTCGAATGGCTAATTTGGCTCAGAATCTTGGTGGGTTTCGTGAGTGCTCCACGAATCGTGATGGGTCAATGGAAGAATCGACAGTGACGGAGCAGAGTGGCGGTGGGAGGAAGAGGAAGGATGTGAGCTCTGAAGATGAATCTTCGAGAATGGTTTCCACTAGTAGTGCTAATCAATTGAGTAATTCAAATGATAAACGGATGAAAGTAGTGGAATCCAGAGATGAAAATGGTGGTATAAAAGCTGAAGTAGATCCTAACTCATCAGATGGTAAGAAGCTGGCCGAGCAAAGCCCGAAACCCGAACCACCAAAAGATTACATCCATGTCAGAGCAAGAAGGGGCCAAGCTACTGATAGCCATAGTTTAGCAGAAAGAGCTAGAAGAGAGAAGATCAGTGAGAGAATGAAAATTTTGCAGGACTTGGTTCCAGGTTGTAACAAGGTTATTGGAAAAGCACTTGTCCTTGATGAGATAATAAATTATATCCAATCACTGCAACGTCAGGTCGAGTTCCTCTCCATGAAACTTGAAGCTGTGAATTCCAGGATGAACATAACCCCTGGCATAGAAGGTTTTACTGTAAAAAATATCGTTAATCAACCATATGATGCAGCTGGAATATTATATGGTTCACAAGCAGCAAGAGATTATACCCAAGGTGCACAAACTGAATGGTTGCATATGCAAATCGGTGGAGGTTTTGAAAGAACGTCTTAG
BLAST of CSPI01G01920 vs. Swiss-Prot
Match: BH079_ARATH (Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 6.0e-69 Identity = 161/283 (56.89%), Postives = 201/283 (71.02%), Query Frame = 1
BLAST of CSPI01G01920 vs. Swiss-Prot
Match: BPE_ARATH (Transcription factor BPE OS=Arabidopsis thaliana GN=BPE PE=2 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 5.6e-43 Identity = 123/227 (54.19%), Postives = 153/227 (67.40%), Query Frame = 1
BLAST of CSPI01G01920 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.2e-34 Identity = 91/156 (58.33%), Postives = 106/156 (67.95%), Query Frame = 1
BLAST of CSPI01G01920 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33 Identity = 99/187 (52.94%), Postives = 116/187 (62.03%), Query Frame = 1
BLAST of CSPI01G01920 vs. Swiss-Prot
Match: BH049_ARATH (Transcription factor bHLH49 OS=Arabidopsis thaliana GN=BHLH49 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.1e-33 Identity = 100/192 (52.08%), Postives = 123/192 (64.06%), Query Frame = 1
BLAST of CSPI01G01920 vs. TrEMBL
Match: A0A0A0LS74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G007910 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 3.8e-147 Identity = 275/276 (99.64%), Postives = 276/276 (100.00%), Query Frame = 1
BLAST of CSPI01G01920 vs. TrEMBL
Match: A0A059A7P4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02908 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.7e-99 Identity = 204/279 (73.12%), Postives = 231/279 (82.80%), Query Frame = 1
BLAST of CSPI01G01920 vs. TrEMBL
Match: M5WAA6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009757mg PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 2.5e-98 Identity = 205/283 (72.44%), Postives = 234/283 (82.69%), Query Frame = 1
BLAST of CSPI01G01920 vs. TrEMBL
Match: A0A0U2RNX4_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 3.3e-98 Identity = 205/283 (72.44%), Postives = 234/283 (82.69%), Query Frame = 1
BLAST of CSPI01G01920 vs. TrEMBL
Match: A0A067FUM3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023847mg PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 4.3e-98 Identity = 205/280 (73.21%), Postives = 232/280 (82.86%), Query Frame = 1
BLAST of CSPI01G01920 vs. TAIR10
Match: AT5G62610.1 (AT5G62610.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 262.3 bits (669), Expect = 3.4e-70 Identity = 161/283 (56.89%), Postives = 201/283 (71.02%), Query Frame = 1
BLAST of CSPI01G01920 vs. TAIR10
Match: AT1G59640.2 (AT1G59640.2 BIG PETAL P) HSP 1 Score: 176.0 bits (445), Expect = 3.2e-44 Identity = 123/227 (54.19%), Postives = 153/227 (67.40%), Query Frame = 1
BLAST of CSPI01G01920 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 146.0 bits (367), Expect = 3.5e-35 Identity = 91/156 (58.33%), Postives = 106/156 (67.95%), Query Frame = 1
BLAST of CSPI01G01920 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 145.2 bits (365), Expect = 6.0e-35 Identity = 99/187 (52.94%), Postives = 116/187 (62.03%), Query Frame = 1
BLAST of CSPI01G01920 vs. TAIR10
Match: AT1G68920.1 (AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 145.2 bits (365), Expect = 6.0e-35 Identity = 100/192 (52.08%), Postives = 123/192 (64.06%), Query Frame = 1
BLAST of CSPI01G01920 vs. NCBI nr
Match: gi|449440736|ref|XP_004138140.1| (PREDICTED: transcription factor bHLH79 [Cucumis sativus]) HSP 1 Score: 528.9 bits (1361), Expect = 5.5e-147 Identity = 275/276 (99.64%), Postives = 276/276 (100.00%), Query Frame = 1
BLAST of CSPI01G01920 vs. NCBI nr
Match: gi|659105714|ref|XP_008453158.1| (PREDICTED: transcription factor bHLH79 [Cucumis melo]) HSP 1 Score: 517.7 bits (1332), Expect = 1.3e-143 Identity = 270/276 (97.83%), Postives = 274/276 (99.28%), Query Frame = 1
BLAST of CSPI01G01920 vs. NCBI nr
Match: gi|1009131203|ref|XP_015882712.1| (PREDICTED: transcription factor bHLH79 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 401.0 bits (1029), Expect = 1.7e-108 Identity = 219/284 (77.11%), Postives = 240/284 (84.51%), Query Frame = 1
BLAST of CSPI01G01920 vs. NCBI nr
Match: gi|1009131205|ref|XP_015882713.1| (PREDICTED: transcription factor bHLH79 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 396.7 bits (1018), Expect = 3.2e-107 Identity = 219/284 (77.11%), Postives = 240/284 (84.51%), Query Frame = 1
BLAST of CSPI01G01920 vs. NCBI nr
Match: gi|694439748|ref|XP_009346736.1| (PREDICTED: transcription factor bHLH79-like [Pyrus x bretschneideri]) HSP 1 Score: 376.7 bits (966), Expect = 3.5e-101 Identity = 207/288 (71.88%), Postives = 237/288 (82.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |