CSPI01G01880 (gene) Wild cucumber (PI 183967)

NameCSPI01G01880
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 1244380 .. 1244586 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATTCTCCTTAAAAATTGGAGATTGGTAATTGATACACCAAATGAAAATGAAGAAAAAAGAAGGGTAAAAGAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGAAGGAGAAAAGAATAAAACCAACCGGCATTACACCTCAAAGGCAACTACTATATGGCAGAAACAACGACGAAGCCCTTGCAAAATGGCCTCCTCATTGT

mRNA sequence

ATGAACATTCTCCTTAAAAATTGGAGATTGGTAATTGATACACCAAATGAAAATGAAGAAAAAAGAAGGGTAAAAGAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGAAGGAGAAAAGAATAAAACCAACCGGCATTACACCTCAAAGGCAACTACTATATGGCAGAAACAACGACGAAGCCCTTGCAAAATGGCCTCCTCATTGT

Coding sequence (CDS)

ATGAACATTCTCCTTAAAAATTGGAGATTGGTAATTGATACACCAAATGAAAATGAAGAAAAAAGAAGGGTAAAAGAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGAAGGAGAAAAGAATAAAACCAACCGGCATTACACCTCAAAGGCAACTACTATATGGCAGAAACAACGACGAAGCCCTTGCAAAATGGCCTCCTCATTGT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G01880.1CSPI01G01880.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 14..42
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G01880Bottle gourd (USVL1VR-Ls)cpilsiB035
CSPI01G01880Bottle gourd (USVL1VR-Ls)cpilsiB047
CSPI01G01880Bottle gourd (USVL1VR-Ls)cpilsiB070
CSPI01G01880Melon (DHL92) v3.6.1cpimedB005
CSPI01G01880Melon (DHL92) v3.6.1cpimedB014
CSPI01G01880Melon (DHL92) v3.6.1cpimedB049
CSPI01G01880Melon (DHL92) v3.6.1cpimedB059
CSPI01G01880Cucumber (Gy14) v2cgybcpiB001
CSPI01G01880Cucumber (Gy14) v2cgybcpiB010
CSPI01G01880Silver-seed gourdcarcpiB0396
CSPI01G01880Silver-seed gourdcarcpiB0532
CSPI01G01880Silver-seed gourdcarcpiB0645
CSPI01G01880Silver-seed gourdcarcpiB1042
CSPI01G01880Cucumber (Chinese Long) v3cpicucB001
CSPI01G01880Cucumber (Chinese Long) v3cpicucB013
CSPI01G01880Cucumber (Chinese Long) v3cpicucB034
CSPI01G01880Cucumber (Chinese Long) v3cpicucB044
CSPI01G01880Watermelon (97103) v2cpiwmbB004
CSPI01G01880Watermelon (97103) v2cpiwmbB063
CSPI01G01880Watermelon (97103) v2cpiwmbB079
CSPI01G01880Wax gourdcpiwgoB060
CSPI01G01880Wax gourdcpiwgoB071
CSPI01G01880Wax gourdcpiwgoB098
CSPI01G01880Wild cucumber (PI 183967)cpicpiB002
CSPI01G01880Wild cucumber (PI 183967)cpicpiB020
CSPI01G01880Wild cucumber (PI 183967)cpicpiB029
CSPI01G01880Cucumber (Gy14) v1cgycpiB108
CSPI01G01880Cucumber (Gy14) v1cgycpiB310
CSPI01G01880Cucumber (Gy14) v1cgycpiB427
CSPI01G01880Cucumber (Gy14) v1cgycpiB501
CSPI01G01880Cucurbita maxima (Rimu)cmacpiB049
CSPI01G01880Cucurbita maxima (Rimu)cmacpiB098
CSPI01G01880Cucurbita maxima (Rimu)cmacpiB211
CSPI01G01880Cucurbita maxima (Rimu)cmacpiB237
CSPI01G01880Cucurbita maxima (Rimu)cmacpiB405
CSPI01G01880Cucurbita maxima (Rimu)cmacpiB693
CSPI01G01880Cucurbita moschata (Rifu)cmocpiB040
CSPI01G01880Cucurbita moschata (Rifu)cmocpiB079
CSPI01G01880Cucurbita moschata (Rifu)cmocpiB197
CSPI01G01880Cucurbita moschata (Rifu)cmocpiB225
CSPI01G01880Cucurbita moschata (Rifu)cmocpiB393
CSPI01G01880Cucurbita moschata (Rifu)cmocpiB687
CSPI01G01880Cucumber (Chinese Long) v2cpicuB000
CSPI01G01880Cucumber (Chinese Long) v2cpicuB008
CSPI01G01880Cucumber (Chinese Long) v2cpicuB037
CSPI01G01880Melon (DHL92) v3.5.1cpimeB005
CSPI01G01880Melon (DHL92) v3.5.1cpimeB015
CSPI01G01880Melon (DHL92) v3.5.1cpimeB055
CSPI01G01880Watermelon (Charleston Gray)cpiwcgB005
CSPI01G01880Watermelon (Charleston Gray)cpiwcgB018
CSPI01G01880Watermelon (Charleston Gray)cpiwcgB066
CSPI01G01880Watermelon (Charleston Gray)cpiwcgB083
CSPI01G01880Watermelon (97103) v1cpiwmB039
CSPI01G01880Watermelon (97103) v1cpiwmB058
CSPI01G01880Watermelon (97103) v1cpiwmB099
CSPI01G01880Cucurbita pepo (Zucchini)cpecpiB020
CSPI01G01880Cucurbita pepo (Zucchini)cpecpiB361
CSPI01G01880Cucurbita pepo (Zucchini)cpecpiB522
CSPI01G01880Cucurbita pepo (Zucchini)cpecpiB656