CSPI01G00680 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAATTTAAAATTTGATGAAATTTAAAATTCTACTTATTTTTGTATATATTTTTGTCATTTACAACAATTTATCATGCTTTATCTCTTATAAATACATCTAATTGAAGCTCTTTTAATTTTAGTTTGCAGAATTTCCCACCAAACTCGCAAGCATTAAGCATCAACTTATCGCAAGCTCCGCCAGACAGCCTCACCAAAAACCAACCTACTCGTCCTCGGCCTTCTCATCTCCACCATCGCCCCCTCCCCCCCCAGCCATTCCTACTTCCAGCCTCCATCTTCACGATTCCAATCCTTGCCGTGCTTCCACAATCTAGAGACTAGAACACCTTGCTTAAGATATTCTTCCATTTTACTCTGTTCCTAACCTTCAATGGACGAAATTCCGTCGTAATCGATTGCAATTTCAACGAACTTTCCTACTCAAGTAAGTGCGCAATCCTTCGTCAGATCAAAGTTTATCGCATAGGGAAAAGTGGATGACGACGATGGAAAATATTAAGAAATCGCTTTCGTACCTTACTTTTTTTCCTGTTTTTTAATACATTATTGACTGAATCTCATAGGTTTTCCTATTTCTTCGGATTCTTTAATTCTCTGCAATTTGTATATGATTCTCATTCGTAGCTGCTGGTAAAGCAAGAAATTCCAAGGCGCGGCTTAATTCGATGCCTTCATTCCGCGCGTTCCTCAACAGCCCCGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGTTGCCAACTTTGGTTTCGTTGCTGCTGTATGTAATCCAAAATTTCAATTACAATATCATTCTCCAAGTCTTGATGATTTCTTGATTTTTGCATTTTTCATGTTCTTCTCTGCTTGTGATGTAATCTGTAATTTGAAATCCGTAATCAATCAATCGCAGGGGCTTGCAGATGTGAAAAAACCTGCCGACATGATTTCTGGGAGAATGACGGGAGGTTGAAACCATTTTTCATTCTTGATAGAATTTGAATCCAAAGAAAGGTTGATGATTTGCAATGATTGATTGTTTGGTAATATATTTTGCAGTTCTCTGCGTCTATTCGTTGTTATGCATGAGATTTGGGTATATGGTTCGACCTCGAAACTATTTGCTTATGGGATGTCATGCTGCAAATGAATCTGTTCAGCTCTATCTTCTCTCTCGTTGGGCGTTGGGGCAGAGGAAGACTGTAGATTACAGCAACGAGTAGGTTCAATGGCGATGGTATAAATATATGATGATGCTATTAATGCTGTTTCGAATCCCTATTGATACTTGCTTTTGGGGTTTGATTTAGTAACTAAAGATGACACACACACACATCTACTTGGTGACTTCAATGTCGTAATTTCCCTTTGCTTCATCTTTTTCGATCAATCTGATAGCTACCTATGCTTACTTTAGATTCTTTTTCACTTAATTAATCTCAAATTTGATCGATATAATTGTGAGAAGATGCGAACTTGGTCTTAGAATAAGTCAGTATTTAGAATACATGATCCAAAGGGGTACACAATATGG ATGCCTTCATTCCGCGCGTTCCTCAACAGCCCCGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGTTGCCAACTTTGGTTTCGTTGCTGCTGGGCTTGCAGATGTGAAAAAACCTGCCGACATGATTTCTGGGAGAATGACGGGAGTTCTCTGCGTCTATTCGTTGTTATGCATGAGATTTGGGTATATGGTTCGACCTCGAAACTATTTGCTTATGGGATGTCATGCTGCAAATGAATCTGTTCAGCTCTATCTTCTCTCTCGTTGGGCGTTGGGGCAGAGGAAGACTGTAGATTACAGCAACGAGTAG ATGCCTTCATTCCGCGCGTTCCTCAACAGCCCCGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGTTGCCAACTTTGGTTTCGTTGCTGCTGGGCTTGCAGATGTGAAAAAACCTGCCGACATGATTTCTGGGAGAATGACGGGAGTTCTCTGCGTCTATTCGTTGTTATGCATGAGATTTGGGTATATGGTTCGACCTCGAAACTATTTGCTTATGGGATGTCATGCTGCAAATGAATCTGTTCAGCTCTATCTTCTCTCTCGTTGGGCGTTGGGGCAGAGGAAGACTGTAGATTACAGCAACGAGTAG
BLAST of CSPI01G00680 vs. Swiss-Prot
Match: MPC1_ARATH (Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 1.2e-35 Identity = 65/91 (71.43%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI01G00680 vs. Swiss-Prot
Match: MPC1_SCHPO (Probable mitochondrial pyruvate carrier 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mpc1 PE=3 SV=3) HSP 1 Score: 95.5 bits (236), Expect = 3.6e-19 Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CSPI01G00680 vs. Swiss-Prot
Match: MPC1_BOVIN (Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.3e-18 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 1
BLAST of CSPI01G00680 vs. Swiss-Prot
Match: MPC1_HUMAN (Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.3e-18 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 1
BLAST of CSPI01G00680 vs. Swiss-Prot
Match: MPC1_MOUSE (Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 6.8e-18 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1
BLAST of CSPI01G00680 vs. TrEMBL
Match: A0A0A0LP00_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G002670 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-54 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI01G00680 vs. TrEMBL
Match: A5AH05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01780 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.3e-36 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1
BLAST of CSPI01G00680 vs. TrEMBL
Match: B9RAJ4_RICCO (Brain protein, putative OS=Ricinus communis GN=RCOM_1506840 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 3.0e-36 Identity = 71/94 (75.53%), Postives = 81/94 (86.17%), Query Frame = 1
BLAST of CSPI01G00680 vs. TrEMBL
Match: M5XZK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013706mg PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 3.9e-36 Identity = 71/94 (75.53%), Postives = 81/94 (86.17%), Query Frame = 1
BLAST of CSPI01G00680 vs. TrEMBL
Match: A0A059D1Z3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01103 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 6.6e-36 Identity = 71/94 (75.53%), Postives = 81/94 (86.17%), Query Frame = 1
BLAST of CSPI01G00680 vs. TAIR10
Match: AT5G20090.1 (AT5G20090.1 Uncharacterised protein family (UPF0041)) HSP 1 Score: 150.2 bits (378), Expect = 7.0e-37 Identity = 65/91 (71.43%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI01G00680 vs. TAIR10
Match: AT4G14695.1 (AT4G14695.1 Uncharacterised protein family (UPF0041)) HSP 1 Score: 58.2 bits (139), Expect = 3.6e-09 Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = 1
BLAST of CSPI01G00680 vs. NCBI nr
Match: gi|449440578|ref|XP_004138061.1| (PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis sativus]) HSP 1 Score: 220.3 bits (560), Expect = 1.6e-54 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
BLAST of CSPI01G00680 vs. NCBI nr
Match: gi|659128970|ref|XP_008464463.1| (PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis melo]) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-53 Identity = 101/103 (98.06%), Postives = 102/103 (99.03%), Query Frame = 1
BLAST of CSPI01G00680 vs. NCBI nr
Match: gi|1009130540|ref|XP_015882355.1| (PREDICTED: mitochondrial pyruvate carrier 1 [Ziziphus jujuba]) HSP 1 Score: 161.8 bits (408), Expect = 6.6e-37 Identity = 73/94 (77.66%), Postives = 83/94 (88.30%), Query Frame = 1
BLAST of CSPI01G00680 vs. NCBI nr
Match: gi|225456262|ref|XP_002283422.1| (PREDICTED: mitochondrial pyruvate carrier 1 [Vitis vinifera]) HSP 1 Score: 160.2 bits (404), Expect = 1.9e-36 Identity = 72/94 (76.60%), Postives = 82/94 (87.23%), Query Frame = 1
BLAST of CSPI01G00680 vs. NCBI nr
Match: gi|1012245819|ref|XP_015942179.1| (PREDICTED: mitochondrial pyruvate carrier 1 [Arachis duranensis]) HSP 1 Score: 159.8 bits (403), Expect = 2.5e-36 Identity = 73/101 (72.28%), Postives = 83/101 (82.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |