BhiUN533G10 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN533G10
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	enoyl-CoA delta isomerase 2, peroxisomal-like
Location	Contig533 : 248104 .. 248322 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTGAAAGGCGAAGCGGCGGTGAGGATGGGGATCGTGGAATCGGCTCACGACGGCGAGGACGGCGTCATGGAGGCTGCCGTACGACTCGGGGAGCAGTTGGGGGCGAGAAATTGGAACGGTGAACCCTACGCGGAAATTAGGAAAAGTCTTTACCCAGAGATCTCTCGGCTGCTTGGATTGCCGGAGAAGGCCATATCGATTTCCAAGCTATGA

mRNA sequence

ATGAAAGTGAAAGGCGAAGCGGCGGTGAGGATGGGGATCGTGGAATCGGCTCACGACGGCGAGGACGGCGTCATGGAGGCTGCCGTACGACTCGGGGAGCAGTTGGGGGCGAGAAATTGGAACGGTGAACCCTACGCGGAAATTAGGAAAAGTCTTTACCCAGAGATCTCTCGGCTGCTTGGATTGCCGGAGAAGGCCATATCGATTTCCAAGCTATGA

Coding sequence (CDS)

ATGAAAGTGAAAGGCGAAGCGGCGGTGAGGATGGGGATCGTGGAATCGGCTCACGACGGCGAGGACGGCGTCATGGAGGCTGCCGTACGACTCGGGGAGCAGTTGGGGGCGAGAAATTGGAACGGTGAACCCTACGCGGAAATTAGGAAAAGTCTTTACCCAGAGATCTCTCGGCTGCTTGGATTGCCGGAGAAGGCCATATCGATTTCCAAGCTATGA

Protein sequence

MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLLGLPEKAISISKL

Homology

[Close]

BLAST of BhiUN533G10 vs. TAIR10
Match: AT4G14430.1 (indole-3-butyric acid response 10)

HSP 1 Score: 80.9 bits (198), Expect = 3.6e-16
Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 2   KVKGEAAVRMGIVES-AHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 61
           K++GE AV +GIV+S A+D E+GV+ A+VRLGE+L A+ W+GE YA IRKSLYPE+  +L
Sbjct: 169 KIRGEEAVGLGIVDSAAYDSEEGVVVASVRLGEKLAAKKWSGEVYASIRKSLYPELCGIL 228

Query: 62  GLPEKAISISKL 73
           GL  +  +  KL
Sbjct: 229 GLETRVFATPKL 240

[Close]

BLAST of BhiUN533G10 vs. TAIR10
Match: AT4G14440.1 (3-hydroxyacyl-CoA dehydratase 1)

HSP 1 Score: 79.0 bits (193), Expect = 1.4e-15
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 2   KVKGEAAVRMGIVES-AHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 61
           K+KGE AV +GIV+S AHD  +GV+EA V LGE L A+ WNGE YA IRKSLYPE+ R++
Sbjct: 167 KLKGEEAVALGIVDSAAHDSAEGVVEATVSLGESLAAKKWNGEVYATIRKSLYPELCRMV 226

Query: 62  GLPEKAISISKL 73
            L    ++   L
Sbjct: 227 DLTANNLATHNL 238

[Close]

BLAST of BhiUN533G10 vs. TAIR10
Match: AT1G65520.1 (delta(3), delta(2)-enoyl CoA isomerase 1)

HSP 1 Score: 46.6 bits (109), Expect = 7.5e-06
Identity = 22/55 (40.00%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 2   KVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEI 57
           KV  +  V+MGIV+SA+      +EAA++LGE++  R  +G  Y ++R+SL  E+
Sbjct: 164 KVTADVGVKMGIVDSAYGSAAETVEAAIKLGEEIVQRGGDGHVYGKMRESLLREV 218

[Close]

BLAST of BhiUN533G10 vs. Swiss-Prot
Match: sp|O23299|ECI2_ARATH (Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI2 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.5e-15
Identity = 40/72 (55.56%), Postives = 55/72 (76.39%), Query Frame = 0


Query: 2   KVKGEAAVRMGIVES-AHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 61
           K++GE AV +GIV+S A+D E+GV+ A+VRLGE+L A+ W+GE YA IRKSLYPE+  +L
Sbjct: 169 KIRGEEAVGLGIVDSAAYDSEEGVVVASVRLGEKLAAKKWSGEVYASIRKSLYPELCGIL 228

Query: 62  GLPEKAISISKL 73
           GL  +  +  KL
Sbjct: 229 GLETRVFATPKL 240

[Close]

BLAST of BhiUN533G10 vs. Swiss-Prot
Match: sp|O23300|ECI3_ARATH (Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana OX=3702 GN=ECI3 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.5e-14
Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 2   KVKGEAAVRMGIVES-AHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 61
           K+KGE AV +GIV+S AHD  +GV+EA V LGE L A+ WNGE YA IRKSLYPE+ R++
Sbjct: 167 KLKGEEAVALGIVDSAAHDSAEGVVEATVSLGESLAAKKWNGEVYATIRKSLYPELCRMV 226

Query: 62  GLPEKAISISKL 73
            L    ++   L
Sbjct: 227 DLTANNLATHNL 238

[Close]

BLAST of BhiUN533G10 vs. Swiss-Prot
Match: sp|O04469|ECI1_ARATH (Enoyl-CoA delta isomerase 1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.4e-04
Identity = 22/55 (40.00%), Postives = 36/55 (65.45%), Query Frame = 0


Query: 2   KVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEI 57
           KV  +  V+MGIV+SA+      +EAA++LGE++  R  +G  Y ++R+SL  E+
Sbjct: 164 KVTADVGVKMGIVDSAYGSAAETVEAAIKLGEEIVQRGGDGHVYGKMRESLLREV 218

[Close]

BLAST of BhiUN533G10 vs. TrEMBL
Match: tr|A0A0A0L8C7|A0A0A0L8C7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141780 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-28
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKVKGEAAV+MGI +SAHDGE+GVMEAAVRLGEQLG R WNGEPYAEIRKSLYPEISRLL
Sbjct: 168 MKVKGEAAVKMGIADSAHDGENGVMEAAVRLGEQLGERKWNGEPYAEIRKSLYPEISRLL 227

Query: 61  GLPEKAISISKL 73
           GLPEKAISISKL
Sbjct: 228 GLPEKAISISKL 239

[Close]

BLAST of BhiUN533G10 vs. TrEMBL
Match: tr|A0A1S3AWS8|A0A1S3AWS8_CUCME (enoyl-CoA delta isomerase 2, peroxisomal-like OS=Cucumis melo OX=3656 GN=LOC103483623 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.0e-28
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKVKGEAAV+MGI +SA+DGE GVMEAAVRLGEQLGAR WNGEPYAEIRKSLYPEISRLL
Sbjct: 168 MKVKGEAAVKMGIADSAYDGESGVMEAAVRLGEQLGARKWNGEPYAEIRKSLYPEISRLL 227

Query: 61  GLPEKAISISKL 73
           GLPEKAISISKL
Sbjct: 228 GLPEKAISISKL 239

[Close]

BLAST of BhiUN533G10 vs. TrEMBL
Match: tr|A0A0A0L9X4|A0A0A0L9X4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141770 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-23
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKV+GEAAVRMGIV+SAHDGED V+ AAVRLGEQL  RNW+GE YAEIRKSLYPE+S +L
Sbjct: 168 MKVRGEAAVRMGIVDSAHDGEDSVVNAAVRLGEQLAGRNWDGEVYAEIRKSLYPEVSEVL 227

Query: 61  GLPEKAISISKL 73
           GLP K ISISKL
Sbjct: 228 GLPGKPISISKL 239

[Close]

BLAST of BhiUN533G10 vs. TrEMBL
Match: tr|A0A0A0L566|A0A0A0L566_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141790 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-22
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKV+GE AV+MG+ ESAH GEDGVMEAAVRLGE+L ARNW+G+ YAEIRKSLYPEIS LL
Sbjct: 87  MKVRGETAVKMGLAESAHQGEDGVMEAAVRLGEELAARNWDGDVYAEIRKSLYPEISGLL 146

Query: 61  GLPEKAISISKL 73
           GL  K I+ISKL
Sbjct: 147 GLTTKVITISKL 158

[Close]

BLAST of BhiUN533G10 vs. TrEMBL
Match: tr|A0A1S3AWB3|A0A1S3AWB3_CUCME (enoyl-CoA delta isomerase 2, peroxisomal-like OS=Cucumis melo OX=3656 GN=LOC103483618 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.0e-21
Identity = 57/72 (79.17%), Postives = 62/72 (86.11%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKV+GEAAVRMGIV+SAH  E  V+ AAVRLGEQL  RNW+GE YAEIRKSLYPEIS +L
Sbjct: 168 MKVRGEAAVRMGIVDSAHHSEVSVVNAAVRLGEQLVGRNWDGEVYAEIRKSLYPEISEVL 227

Query: 61  GLPEKAISISKL 73
           GLP KAISISKL
Sbjct: 228 GLPGKAISISKL 239

[Close]

BLAST of BhiUN533G10 vs. NCBI nr
Match: XP_004134080.1 (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus] >KGN56882.1 hypothetical protein Csa_3G141780 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 4.4e-28
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKVKGEAAV+MGI +SAHDGE+GVMEAAVRLGEQLG R WNGEPYAEIRKSLYPEISRLL
Sbjct: 168 MKVKGEAAVKMGIADSAHDGENGVMEAAVRLGEQLGERKWNGEPYAEIRKSLYPEISRLL 227

Query: 61  GLPEKAISISKL 73
           GLPEKAISISKL
Sbjct: 228 GLPEKAISISKL 239

[Close]

BLAST of BhiUN533G10 vs. NCBI nr
Match: XP_008438558.1 (PREDICTED: enoyl-CoA delta isomerase 2, peroxisomal-like [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 7.5e-28
Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKVKGEAAV+MGI +SA+DGE GVMEAAVRLGEQLGAR WNGEPYAEIRKSLYPEISRLL
Sbjct: 168 MKVKGEAAVKMGIADSAYDGESGVMEAAVRLGEQLGARKWNGEPYAEIRKSLYPEISRLL 227

Query: 61  GLPEKAISISKL 73
           GLPEKAISISKL
Sbjct: 228 GLPEKAISISKL 239

[Close]

BLAST of BhiUN533G10 vs. NCBI nr
Match: XP_022980470.1 (enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 64/72 (88.89%), Postives = 67/72 (93.06%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKVKGE+AVRMGIVESAH+G DGVM+AAVRLGEQL  RNWNGEPYAEIRKSLYPEISRLL
Sbjct: 168 MKVKGESAVRMGIVESAHEGADGVMKAAVRLGEQLAERNWNGEPYAEIRKSLYPEISRLL 227

Query: 61  GLPEKAISISKL 73
           GLPEK  SISKL
Sbjct: 228 GLPEKFFSISKL 239

[Close]

BLAST of BhiUN533G10 vs. NCBI nr
Match: XP_022924233.1 (enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita moschata])

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-25
Identity = 62/72 (86.11%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKV GE AVRMGIVESAH+G DGVM+AAVRLGEQL  RNWNGEPYAEIRKSL+PEISRLL
Sbjct: 168 MKVTGEPAVRMGIVESAHEGADGVMKAAVRLGEQLAERNWNGEPYAEIRKSLHPEISRLL 227

Query: 61  GLPEKAISISKL 73
           GLPEK  SISKL
Sbjct: 228 GLPEKVFSISKL 239

[Close]

BLAST of BhiUN533G10 vs. NCBI nr
Match: XP_023526034.1 (enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.0 bits (310), Expect = 2.0e-25
Identity = 62/72 (86.11%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1   MKVKGEAAVRMGIVESAHDGEDGVMEAAVRLGEQLGARNWNGEPYAEIRKSLYPEISRLL 60
           MKVKGE AVRMGIVESAH+G DGVM+AAVRLGEQL  R WNGEPYAEIRKSL+PEISRLL
Sbjct: 168 MKVKGEPAVRMGIVESAHEGADGVMKAAVRLGEQLAERKWNGEPYAEIRKSLHPEISRLL 227

Query: 61  GLPEKAISISKL 73
           GLPEK  SISKL
Sbjct: 228 GLPEKVFSISKL 239

The following BLAST results are available for this feature:

BLAST of BhiUN533G10 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14430.1	3.6e-16	55.56	indole-3-butyric acid response 10	[more]
AT4G14440.1	1.4e-15	55.56	3-hydroxyacyl-CoA dehydratase 1	[more]
AT1G65520.1	7.5e-06	40.00	delta(3), delta(2)-enoyl CoA isomerase 1	[more]

BLAST of BhiUN533G10 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23299\|ECI2_ARATH	6.5e-15	55.56	Enoyl-CoA delta isomerase 2, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI2...	[more]
sp\|O23300\|ECI3_ARATH	2.5e-14	55.56	Enoyl-CoA delta isomerase 3 OS=Arabidopsis thaliana OX=3702 GN=ECI3 PE=1 SV=1	[more]
sp\|O04469\|ECI1_ARATH	1.4e-04	40.00	Enoyl-CoA delta isomerase 1, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=ECI1...	[more]

BLAST of BhiUN533G10 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L8C7\|A0A0A0L8C7_CUCSA	2.9e-28	91.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141780 PE=4 SV=1	[more]
tr\|A0A1S3AWS8\|A0A1S3AWS8_CUCME	5.0e-28	91.67	enoyl-CoA delta isomerase 2, peroxisomal-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A0A0L9X4\|A0A0A0L9X4_CUCSA	1.3e-23	80.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141770 PE=4 SV=1	[more]
tr\|A0A0A0L566\|A0A0A0L566_CUCSA	1.8e-22	77.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G141790 PE=4 SV=1	[more]
tr\|A0A1S3AWB3\|A0A1S3AWB3_CUCME	2.0e-21	79.17	enoyl-CoA delta isomerase 2, peroxisomal-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of BhiUN533G10 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134080.1	4.4e-28	91.67	PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis...	[more]
XP_008438558.1	7.5e-28	91.67	PREDICTED: enoyl-CoA delta isomerase 2, peroxisomal-like [Cucumis melo]	[more]
XP_022980470.1	1.1e-26	88.89	enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita maxima]	[more]
XP_022924233.1	2.0e-25	86.11	enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita moschata]	[more]
XP_023526034.1	2.0e-25	86.11	enoyl-CoA delta isomerase 2, peroxisomal-like [Cucurbita pepo subsp. pepo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006635	fatty acid beta-oxidation
cellular_component	GO:0005777	peroxisome
molecular_function	GO:0004165	dodecenoyl-CoA delta-isomerase activity
molecular_function	GO:0004300	enoyl-CoA hydratase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN533M10	BhiUN533M10	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11941:SF84	ENOYL-COA DELTA ISOMERASE 1, PEROXISOMAL	coord: 2..58
None	No IPR available	PANTHER	PTHR11941	ENOYL-COA HYDRATASE-RELATED	coord: 2..58

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
BhiUN533G10	Wax gourd	wgowgoB036
BhiUN533G10	Cucumber (Gy14) v1	cgywgoB531
BhiUN533G10	Cucumber (Gy14) v2	cgybwgoB301
BhiUN533G10	Cucurbita maxima (Rimu)	cmawgoB0346
BhiUN533G10	Cucurbita maxima (Rimu)	cmawgoB1028
BhiUN533G10	Cucurbita moschata (Rifu)	cmowgoB0335
BhiUN533G10	Cucurbita moschata (Rifu)	cmowgoB1022
BhiUN533G10	Cucurbita pepo (Zucchini)	cpewgoB0408
BhiUN533G10	Cucurbita pepo (Zucchini)	cpewgoB0802
BhiUN533G10	Cucurbita pepo (Zucchini)	cpewgoB1122
BhiUN533G10	Wild cucumber (PI 183967)	cpiwgoB313
BhiUN533G10	Cucumber (Chinese Long) v3	cucwgoB317
BhiUN533G10	Cucumber (Chinese Long) v2	cuwgoB311
BhiUN533G10	Bottle gourd (USVL1VR-Ls)	lsiwgoB466
BhiUN533G10	Melon (DHL92) v3.6.1	medwgoB560
BhiUN533G10	Melon (DHL92) v3.5.1	mewgoB556
BhiUN533G10	Watermelon (Charleston Gray)	wcgwgoB450
BhiUN533G10	Watermelon (97103) v2	wgowmbB282
BhiUN533G10	Watermelon (97103) v1	wgowmB291
BhiUN533G10	Silver-seed gourd	carwgoB0299
BhiUN533G10	Silver-seed gourd	carwgoB1126