BhiUN403G4 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN403G4
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic-like
Location	Contig403 : 88450 .. 95517 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTTACAATTTAACTATAAATGTAACTGAAATGGAAGTTTTGTTTGATTCCATTCCATTCAGGCCTCTCGTTTGGAGGAAAGAATATCAATTATCAATATTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTTGCTTTTTCATTTTCACTTCGAAATTCTTCATACTTCGTTCCGATTCAGCAAAAATGCATTTCTCCAACGCGAATTTTGCTTCTTCTTCTGCCATTCCCACTGCAATTCTTCCACTTCCTTCTCCTAATGTAATTTCGCCAACTTCCTTTCTCTTTTTCCATGGCGTTCTGTTCAATCTTTACTTCTAAATCCTTTTTTCTAAGCTTTTCTTTCTCTGTTTCTATCTCTAGCTTGCTTGTTTCAGGATTTCGCACCGGAAAACTCATCGGAGTTTCCTTTTCAGTTCATTGTTCGAATTTAAGGCGCGCCGAAATCTCAGAGTTTCGGCGAATTCGAGTAATCGTCAAAGTAGCAATGCCTCAACTGATTTGGACGTTCCATTTCCTCGCGATTATTCTGATCTTCTCAATCAGGTATGGTTTCAATCACTTTTGCAATCTCTTTTGTTTCTTTCTTTTTACTTCTAGTAACCATTTTTCTACGATAACTTCTCTTAACTTCTCTGCTGTGTATGTTTTTTGTGTCATTTTAGCAGTTAGCTACTTCAATTAACTTCTCTTAGCTTTTCATTTCATTTTTTTTGTGTTTGTTTTTCACATTGCATTTAGCTTTGAGATGTCAGTATAATTTTCGGATCTCGTCTTTGGAGTCTCTTTTGCTTCTTTTTTACTTCTTGTAGTCATTTCTACGATCACTTCACGGCTGTGTATGCTACTTCAATGAACTTCGCTGAGCTTTTCATTTCATGTTTTCATTTTTTGTTGTTTTTCGCATTACATTTAGCTTTGAGATGTAACTATTATTTTCGGATCTCGTCTTAAAAACAACTACAGGCGAAAAAAGCAACTGAAGCGGCTTTAAGAGATAACAAACAGTTGATGGTTAGTTTTGAGTATATTTTGATTTTAGTTGAATCGGGAGAAGCATTTATAGATTGATAAAATAGTGTGAAATTTCTGATCCAAATAATTCTGGTTTAGGAAATTGAATTTCCAACTGCTGGACTTGAATCAGTTCCAGGTTCTTTCCTCTTCTTGATTTGTTGCATTTCAATTGCGTTATCATCTCAAATTGTTCCCAGGCCTCTCTAGTAACTTGTTCTGCCTGTTACAGACCGTATAACCTTATGTATCAATCAGGTGATGGCGAAGGAGGAAATGAAATGACTGAGAGTATGCAATTGATTCGACAATTTTGTGACTGCTTCATAGATCCACTGAAAGCCACTCGGACCAGAGTAGTAATGTCCTACTGCATTATCCTTCTATTTTCTTACAAATTAAAATAAAATGCTTGCCTTTATTTATGCTGTAGAATTTATCAATGGGAGGGAGGTGAAATCTTCTTCAGTCTTTTATATATTTCTTTCTAAAATTTCTCTATATAAAGACCATAATACCTACCACGATTTATCACTTTTTTTCGAGAAATTATTCAGCGAAGCTACCACAATGTGGCCAGCATTTTTATGCCATGTGTATGAGAGAAGTTTTTAAAATTTATATTCCGTGGTTATTAGGAGGCAAACAAAATTTTAAATCTACATCCAACTGTTATTATGATGCAACCTTATGACGGTCTTGTTGAATTACTTATCCTTTTTTTCCTTTTGATATCAGTACAAAAAATTTCTCTTGTGGTCATACTATATTTAGCAGAATCTTCTTAGTTTTCTTCACGATTAATCACATGTTTTCCCTCTGATATATCCTCATGTTAGGACATTTGAACGAGGAAATGTAGTATAACTGGCACCCTTTTTGTGTTAACAATCATGTTTTTCTTTTTTAATTGTAATATGCTTGCTGTCTGATGTTCCTTTTTTCTCTTTTCTGACCATATAAAAGCTCTTTTCACATTCTAGACTGTTAGTTGTAGTAAGGGAAACATATTTAGTTCTTTCCAGAGGCCAACGAAGTTAAATTCGCAAGAAACACAGCATTTGAAGGAGTCTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCAGAAGATGAGCTTTTTCTTGTTGCATATCCATATTTCAATGTCAATGGTTAGTGAAGCCTTCCTTTGTTTCTTTTCCATCTTTTATCTAAATAACTCAAAATTAAGGTCCCATTTTATAACCATTTGATTTGTTTCATCTACATTTTTTACAATGATTTGCAATTTTTCAAGTAATTCTTAACCAAATTCAAAAAATAAAAACAACTTTTTGAAAACAACTTTTTTTTTAGTTCTCAAATTTTGGCTTGATTAACCCTGAATGAAAAGTAGATAACAAATGAGAAATTTGGAGGTAAAAATAATGATCATAGGCATAATTTTTTTTAAAAAAATTGTTATCAAATGGAGTCTGAATAATTAACTGAGCTTAGATTACAAATTTATTTTTCCATTACATTACAGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCTGTCCAAAACACTACACGGAAACTCATAATATTTAACGGAGAGCTCGACCGCATTAGATCCGGCTGTATCCTTTTATCAACATTTTTATTATTCAACGAAGAGAGGGTATGGGATCCCCATTTGATACGGTAAAAAATTTCTAACTAAAAATAGGTTAAAATGCAGCTGTAGGCTAGCGTTTAAGAGATCTTAAAATTATTTTGTGTTTAATTAGTTTATTAACTTTGAAACTTTCATTTTTGTGTCTAGTTCTTTAATAGCAATTTTCTAAAATTTGCACGACTAATTAGACCGAAAATTAAGGGACTAATAGTGTAGACACTTGGAACCATGAATATTATCTTTTACTAATTACTAATTAGTATGGTTTTATGAATTTAAGTCATTGTCAAATATTATAATTATTTATATTACATTTACATTTAGGTAACTACCTTCTTGGGAGTAAAAAACTAACAAAGTAAAAGTAGGGTACAGCCCGCATCACTTTTAAAAGTTTATATGATTAAATTTCTATAGTATTTGCAACGTCAATATGTTCTCACATATAAATGAATCATTTCATTTTCCATTTATTAAAAATACTTTTGGTCTTTCAACGTTTTTTAAAGTAATTTTAGTCCGTAACGATTTAGCATCTTTAACTTTAATTTGTAACAAATTTAGTCGATGTATTGTCTTAATTTATAAGGATTTAGTCCTAACATAAAATATATATATTACTAGTATTTTAGAACCAAATGCATTTATAATTTATAAAGATTTAACTCATTACATGGAAAAAAAAATACTTATTTTTAATGAAAAATTAGGTTTTTCACCGTACTGTAATTGTTATATGATGAATATTTTCATCTTACTTCAACATTTGTATTTATTTATTTATTCATTTATTTTTGTTTTTTTAGAATAACAGCACAAAAAGGAAAGATCGGACATTAGGTTGAAGTAACAATAGCTTTGTCATGATCGACAAGACTATTTAAACTATTATTTTTTATTATATTATCATTGTCTTTATTATATGAATGTGCACCTTAATAGGTGAAAGACTATCCGCCATTTTTCTACCCAAAGCTGGCGGCACTGATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCACAACTTCAAGGGGCAGAAAGGAGGAGTTCTTTTCAGGTTTCACATTTCACTTTTAAATCCTGCCATTCCCATGATTCTTCCATAATAATACGACTTTATTAAAACCTTTTTTATTTTTCTTTTTGAAAATGAAGTTCATTTTTTCTCCTAAATTTCTTACTGTAATTTGCATCTTTTTTAAAGTGAAAAAATTGAATTTTTAGTCCAAGCCGAAAAATAAAATAAGTTTCTAAAATCTACTTTTTTTGTTTTTCAAAATTTCACTTGATTTTTGAAAATATTGGTAAAATGTAGATAAAAAACAAGAAATTTAGAGGTGGACTAAATATTTATAAGCTTAATTTTCAAAAACTAAAAATAAAAAACCTTACTAATTGGGACCTTAGTTTTGCTTTTCCCGCTTAATAAACTATTTTTTCTAATTTTAAAATTTGGCTGAATTTTTTTAAAATTTGATTAGAAAATGAATAACAAAATATAGACATTTGTATGGATTAAAATAATATTTATAAACTTAATTTTCAAATCGACGTTCATTTCTCTTTTCTGGTTTGTTACGTTAACCTAGGTGTTACCCAGGTCCTTGGAAAGTACTTAGGAAAGTGAGGAACAAATTCGTCTGCGTGCATCAGCAAGAAGACATGCCTTCTCTCAAGGAAGTTGCTTTAAACATTCTTCCTTCATCTTAAGGGGTACGTAACTACTCCACTAATCAACTCCTACTTCACAAAATCTTATCCACATTCTATTAACTTTTCTTTTTTGTTCTCTATTTTTAGAAATTAATTAAGCTTGTAAAACTTAGGTTTAAACTACTCCACTAATCAACTCCTATTCACAAAATCTTATCCACATTCCATTAACTTTTCTTTTTTGTTCCCTATTTTTAGAAATTAATTAAGCTTGTAAAACTTACGTTTAAACTCAATTATACTAGTTTGTTCTATTTTGATCTCGAAACTTTTAAAAACGCCTATTCTAATCTCTAAATTTTTAAAAAGTGCTTACGTTGGTCCCTGCTATTAAAAATTTGTTAGCTTTTAAATAAAATAATGAAATATCTTATAATTTTTTATGATCAGACTTCCAAATAAGTCAATCACGCTAAAAAATATTGGGTTTGAATTTTGAATTAGATGATAAAGCAATTTTCTATAGAATTCAAAAAACATTTTGCGTTCAAGAGTTTGACTTTGTCGCGTTAGTTATTAGCATTTTACTTCACCTTTATTTTGCTCAACATGGTAGACGCAATTTCATCAAAGAGTTAATAAAATCTTAATAGTAAGAACCAAAATAATCACTTTTTAAAAATTCAGGGACTAAAATGGTCATTTTTTAGAGTTACCAAAATAGAACAAGATTCAAAGTTTAAGGACCAAAATAGGATTTAAACCTAAAACTTATTATTTCTCTGGTTTATTACTATTAACACTATCAAAATCTTAAGATAAATTGCAAAAACAAAAACTACACGTGTTTTTAGTTTTCACCATTTCCTGTGATTTCCTAAAACAGTCTAATATGGGCATTTAGCAGACATGTAAAATGTCGTACGATCTTTAAAAATAGAAAGCAAGAAAAAGTTAAACAAGCACAAAAGTTTCAATTTACAATCATCAACTTGACCTTAATTGCACCTAATTAAAATGGAAACTTCTAATACTCTCAAAATTAGAGTATTAGTATATGACAATTACAGTTGATCTATGCTCATTCTAATATATATATTTGAATTAATTGCATCAGCAATTTATTACTATTCTTTTTTTATTTTATTTTATTTTTTTATTTTGTAGGTTTTTATTAGTCTATATTACCGTCCATTGTCATGGGAAGAGAGGATCCTTTGTTCCTTAGCATCAAAGTATTTTCTGGTAAATGCTACATCAACACAATCTGTATATTCCCATCAAATATTTGGCGTCCATAAAATTGAAGAAATGGCTAATAATAGACATAGTTTAAAACCCTTTTTTTCACCGACTTCAAGACCAAATTCACCTGCCTTCGATGTGTTTTCCACTACCTATTTTCCAAAAGACCAATAAAAAAGATAGGTTAAAAACAAGCTTAGTTACTGAACTTCTGAATTTATCTAATAGAACCTTAAACATAAAAAAAAAATGTTCAATAGGTTTCTACACTTTCAAATTCATACCTAATTGCAATAGATCTCCAAACCTTATAAGTGTTCAATAAATCCCGTAAAGTTAATTTACTGTTTAATCAACCCCTAACATATTAAAGAATTTAAAGTTAACTGATTCATTGGCCTTGAAATTAGAATACATCAAAAGCCCTACCAAACATAAAATTGGAAGTCCAAGCACTTGTTAGACATTATCTAAAGGCCTATTATTTTGATCCGTACTTTACGACTAATCTCTTATTCATTCAAATTCGATCAAAATGTAAACATTAGAATGAAAATCAAATTAAACTTCATATACTATAAAACATAATTACAAATCCACGAAATGTTCCAAGATTATTTGTTCCATATTGCTAAAAATCCAATTTCCCTCCATGAAATGCAGCCAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAGAAAAAGAAAAGAAAGAAAGTAGATAAAAGTTCTTACAGGCAATACTAGAGCTTCGAGGGCAATGAAAAAACACCACCTGATACACCGAACGTCAAGCTTTTTTTTTTTTTTTTCACCTCTTCATTCAGCTCAAACTTCTCTCACTTTCACCAGTATTAATAATTGTAACCCCCTCTTCTTTCCTTCACCCGAACTGAATAATTGTCCCTTTTCAGGGACAGAATAAGCATAAATATGACCATCTTCAATATTAAGGGGTAAAAAAAAGGAAAGAAAAATGCTATTCGCTCACTGTAAATTCACACCAATAGGTTTTTTTTCCCCTGCATTCTTCTTGCTAGCTTCTCTCCCTTTGTGTGTAACGAACCAAACTGACTCTAGTTCCTAAAAAGTAAAACGCCCATCCTTATCTAGAAAGGTAATAGAAGATAGAGCAGCCACTAGCTATTTTTTTTCTATTTGCCACTTTTTTTTTAACATATATGAAAAAATATATATATATGAAACAACGCCTATAAGTGGAGGTTGTGGGGGCAGAGAAGAAAGCAATAGGGTGGAGAAATGAGTGTGAAGAAGAAAGAAGGAAGAAGAAAAATAATAGGGCGTAAATTCAATCAGATGGATAAGGGTCCAAGTTAGCGGGTACGGCAGAGGAGAGCTGAATGTGAGACACTCGCACTGCTCCAAGTAATCGCTCTGGTAATTCTTCTGTTGTATTTGCC

mRNA sequence

CAAATTTACAATTTAACTATAAATGTAACTGAAATGGAAGTTTTGTTTGATTCCATTCCATTCAGGCCTCTCGTTTGGAGGAAAGAATATCAATTATCAATATTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTTGCTTTTTCATTTTCACTTCGAAATTCTTCATACTTCGTTCCGATTCAGCAAAAATGCATTTCTCCAACGCGAATTTTGCTTCTTCTTCTGCCATTCCCACTGCAATTCTTCCACTTCCTTCTCCTAATCTTGCTTGTTTCAGGATTTCGCACCGGAAAACTCATCGGAGTTTCCTTTTCAGTTCATTGTTCGAATTTAAGGCGCGCCGAAATCTCAGAGTTTCGGCGAATTCGAGTAATCGTCAAAGTAGCAATGCCTCAACTGATTTGGACGTTCCATTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCGGCTTTAAGAGATAACAAACAGTTGATGGAAATTGAATTTCCAACTGCTGGACTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAAATGAAATGACTGAGAGTATGCAATTGATTCGACAATTTTGTGACTGCTTCATAGATCCACTGAAAGCCACTCGGACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTCGCAAGAAACACAGCATTTGAAGGAGTCTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCAGAAGATGAGCTTTTTCTTGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCTGTCCAAAACACTACACGGAAACTCATAATATTTAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTACCCAAAGCTGGCGGCACTGATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCACAACTTCAAGGGGCAGAAAGGAGGAGTTCTTTTCAGGTGTTACCCAGGTCCTTGGAAAGTACTTAGGAAAGTGAGGAACAAATTCGTCTGCGTGCATCAGCAAGAAGACATGCCTTCTCTCAAGGAAGTTGCTTTAAACATTCTTCCTTCATCTTAAGGGGTTTTTATTAGTCTATATTACCGTCCATTGTCATGGGAAGAGAGGATCCTTTGTTCCTTAGCATCAAAGTATTTTCTGGTAAATGCTACATCAACACAATCTGTATATTCCCATCAAATATTTGGCGTCCATAAAATTGAAGAAATGGCTAATAATAGACATAGTTTAAAACCCTTTTTTTCACCGACTTCAAGACCAAATTCACCTGCCTTCGATGTGTTTTCCACTACCTATTTTCCAAAAGACCAATAAAAAAGATAGGTTAAAAACAAGCTTAGTTACTGAACTTCTGAATTTATCTAATAGAACCTTAAACATAAAAAAAAAATGTTCAATAGGTTTCTACACTTTCAAATTCATACCTAATTGCAATAGATCTCCAAACCTTATAAGTGTTCAATAAATCCCGTAAAGTTAATTTACTGTTTAATCAACCCCTAACATATTAAAGAATTTAAAGTTAACTGATTCATTGGCCTTGAAATTAGAATACATCAAAAGCCCTACCAAACATAAAATTGGAAGTCCAAGCACTTGTTAGACATTATCTAAAGGCCTATTATTTTGATCCGTACTTTACGACTAATCTCTTATTCATTCAAATTCGATCAAAATGTAAACATTAGAATGAAAATCAAATTAAACTTCATATACTATAAAACATAATTACAAATCCACGAAATGTTCCAAGATTATTTGTTCCATATTGCTAAAAATCCAATTTCCCTCCATGAAATGCAGCCAAAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAGAAAAAGAAAAGAAAGAAAGTAGATAAAAGTTCTTACAGGCAATACTAGAGCTTCGAGGGCAATGAAAAAACACCACCTGATACACCGAACGTCAAGCTTTTTTTTTTTTTTTTCACCTCTTCATTCAGCTCAAACTTCTCTCACTTTCACCAGTATTAATAATTGTAACCCCCTCTTCTTTCCTTCACCCGAACTGAATAATTGTCCCTTTTCAGGGACAGAATAAGCATAAATATGACCATCTTCAATATTAAGGGGTAAAAAAAAGGAAAGAAAAATGCTATTCGCTCACTGTAAATTCACACCAATAGGTTTTTTTTCCCCTGCATTCTTCTTGCTAGCTTCTCTCCCTTTGTGTGTAACGAACCAAACTGACTCTAGTTCCTAAAAAGTAAAACGCCCATCCTTATCTAGAAAGGTAATAGAAGATAGAGCAGCCACTAGCTATTTTTTTTCTATTTGCCACTTTTTTTTTAACATATATGAAAAAATATATATATATGAAACAACGCCTATAAGTGGAGGTTGTGGGGGCAGAGAAGAAAGCAATAGGGTGGAGAAATGAGTGTGAAGAAGAAAGAAGGAAGAAGAAAAATAATAGGGCGTAAATTCAATCAGATGGATAAGGGTCCAAGTTAGCGGGTACGGCAGAGGAGAGCTGAATGTGAGACACTCGCACTGCTCCAAGTAATCGCTCTGGTAATTCTTCTGTTGTATTTGCC

Coding sequence (CDS)

ATGCATTTCTCCAACGCGAATTTTGCTTCTTCTTCTGCCATTCCCACTGCAATTCTTCCACTTCCTTCTCCTAATCTTGCTTGTTTCAGGATTTCGCACCGGAAAACTCATCGGAGTTTCCTTTTCAGTTCATTGTTCGAATTTAAGGCGCGCCGAAATCTCAGAGTTTCGGCGAATTCGAGTAATCGTCAAAGTAGCAATGCCTCAACTGATTTGGACGTTCCATTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCGGCTTTAAGAGATAACAAACAGTTGATGGAAATTGAATTTCCAACTGCTGGACTTGAATCAGTTCCAGGTGATGGCGAAGGAGGAAATGAAATGACTGAGAGTATGCAATTGATTCGACAATTTTGTGACTGCTTCATAGATCCACTGAAAGCCACTCGGACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTCGCAAGAAACACAGCATTTGAAGGAGTCTCATTCAAGTTGGACTACCTCACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCAGAAGATGAGCTTTTTCTTGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCTGTCCAAAACACTACACGGAAACTCATAATATTTAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATCCGCCATTTTTCTACCCAAAGCTGGCGGCACTGATGAAGACTCTCTTCCCCAAGATGGAGACTGTATATTACATTCACAACTTCAAGGGGCAGAAAGGAGGAGTTCTTTTCAGGTGTTACCCAGGTCCTTGGAAAGTACTTAGGAAAGTGAGGAACAAATTCGTCTGCGTGCATCAGCAAGAAGACATGCCTTCTCTCAAGGAAGTTGCTTTAAACATTCTTCCTTCATCTTAA

Protein sequence

MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANSSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEGGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRNKFVCVHQQEDMPSLKEVALNILPSS

Homology

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BLAST of BhiUN403G4 vs. TAIR10
Match: AT5G48790.1 (Domain of unknown function (DUF1995))

HSP 1 Score: 434.1 bits (1115), Expect = 7.6e-122
Identity = 215/278 (77.34%), Postives = 237/278 (85.25%), Query Frame = 0


Query: 49  KARRNLRVSANS-SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFP 108
           K  RNL+  A S S   ++N S D +VPFPRDY +L+NQAK+A E AL+D KQLMEIEFP
Sbjct: 40  KTNRNLKFRACSVSGGYNNNTSVD-NVPFPRDYVELINQAKEAVEMALKDEKQLMEIEFP 99

Query: 109 TAGLESVPGDGEGGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG 168
           T+GL SVPGDGEG  EMTES+ +IR+FCD  + P KA  TR+FFPEANEVKFA+ T F G
Sbjct: 100 TSGLASVPGDGEGATEMTESINMIREFCDRLLAPEKARSTRIFFPEANEVKFAQKTVFGG 159

Query: 169 VSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQ 228
             FKLDYLTKPS FEDFGF E+VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV 
Sbjct: 160 TYFKLDYLTKPSLFEDFGFFERVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVV 219

Query: 229 NTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRC 288
           NT RKLIIFNGELDRIRSGYYP FFYPKLAAL KTL PKMETVYYIHNFKGQKGGVLFRC
Sbjct: 220 NTDRKLIIFNGELDRIRSGYYPKFFYPKLAALTKTLLPKMETVYYIHNFKGQKGGVLFRC 279

Query: 289 YPGPWKVLRKVRNKFVCVHQQEDMPSLKEVALNILPSS 326
           YPGPW+VLR+ RNK++CVHQQE MPSLKEVAL+IL S+
Sbjct: 280 YPGPWQVLRRTRNKYICVHQQESMPSLKEVALDILASA 316

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BLAST of BhiUN403G4 vs. TAIR10
Match: AT1G73060.1 (Low PSII Accumulation 3)

HSP 1 Score: 58.5 bits (140), Expect = 8.6e-09
Identity = 80/315 (25.40%), Postives = 130/315 (41.27%), Query Frame = 0


Query: 41  LFSSLFEFKARRNLRVSANSS---NRQSSNASTDLDVPF--PRDYSDLLNQAKKATEAAL 100
           LFSS     +R     +ANS    +  SSN+     VP   P+ Y  L   A  +   AL
Sbjct: 11  LFSSPSILTSRIRCGATANSGGAISSTSSNSDPRRGVPLYKPKSYEVLATDAANSLAFAL 70

Query: 101 RDNKQLMEIEFPTAGLESVPGDGEGGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEAN 160
           +D+K  +EI+FP          G   + +  ++QL         + ++ TR  + FP+  
Sbjct: 71  QDSKSRLEIDFPPLPSSISSYKGSSDDFIDANIQLAVTVVRKLQEKIE-TRACIVFPDKP 130

Query: 161 EVKFARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPE 220
           E + A         + +G+S   LD +   S   FF       DF F ++ +     +P+
Sbjct: 131 EKRRASQRFKAAFDSVDGISIGSLDDIPGTSVTNFFRSIRSTLDFDFEDENE--GTWEPK 190

Query: 221 DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL 280
           +   L  +   +  E+  +E+  +    +T    ++FN ELD +R+      F PK   L
Sbjct: 191 EPPTLYIFINCSTRELSFIEKFVETFASST--PALLFNLELDTLRADLGLLGFPPK--DL 250

Query: 281 MKTLFPKMETVYYIHNFKGQK-----------GGVLFRCYPGPWKV-LRKVRNKFVCVHQ 323
                 +   V+YI   +  K            G LFR YPGPW+V L++    F CV +
Sbjct: 251 HYRFLSQFIPVFYIRTREYSKTVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAE 310

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BLAST of BhiUN403G4 vs. Swiss-Prot
Match: sp|Q8H0W0|LPA3_ARATH (Protein LOW PSII ACCUMULATION 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPA3 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07
Identity = 80/315 (25.40%), Postives = 130/315 (41.27%), Query Frame = 0


Query: 41  LFSSLFEFKARRNLRVSANSS---NRQSSNASTDLDVPF--PRDYSDLLNQAKKATEAAL 100
           LFSS     +R     +ANS    +  SSN+     VP   P+ Y  L   A  +   AL
Sbjct: 11  LFSSPSILTSRIRCGATANSGGAISSTSSNSDPRRGVPLYKPKSYEVLATDAANSLAFAL 70

Query: 101 RDNKQLMEIEFPTAGLESVPGDGEGGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEAN 160
           +D+K  +EI+FP          G   + +  ++QL         + ++ TR  + FP+  
Sbjct: 71  QDSKSRLEIDFPPLPSSISSYKGSSDDFIDANIQLAVTVVRKLQEKIE-TRACIVFPDKP 130

Query: 161 EVKFARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPE 220
           E + A         + +G+S   LD +   S   FF       DF F ++ +     +P+
Sbjct: 131 EKRRASQRFKAAFDSVDGISIGSLDDIPGTSVTNFFRSIRSTLDFDFEDENE--GTWEPK 190

Query: 221 DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL 280
           +   L  +   +  E+  +E+  +    +T    ++FN ELD +R+      F PK   L
Sbjct: 191 EPPTLYIFINCSTRELSFIEKFVETFASST--PALLFNLELDTLRADLGLLGFPPK--DL 250

Query: 281 MKTLFPKMETVYYIHNFKGQK-----------GGVLFRCYPGPWKV-LRKVRNKFVCVHQ 323
                 +   V+YI   +  K            G LFR YPGPW+V L++    F CV +
Sbjct: 251 HYRFLSQFIPVFYIRTREYSKTVAVAPFVLNYNGALFRQYPGPWQVMLKQTDGSFACVAE 310

[Close]

BLAST of BhiUN403G4 vs. TrEMBL
Match: tr|A0A1S3BKQ4|A0A1S3BKQ4_CUCME (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490732 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 2.8e-171
Identity = 306/326 (93.87%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60
           MHFSNANFASSS I TA+LPL SP LACFRISHRKTHRSF+ SS+FEF  RRNLRV   S
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  -SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEDMPSLKEVALNILPSS 326
           NK  CVHQQE+MPSLKEVALNILPSS
Sbjct: 301 NKLACVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of BhiUN403G4 vs. TrEMBL
Match: tr|A0A0A0L151|A0A0A0L151_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006620 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 3.1e-170
Identity = 304/326 (93.25%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRV-SAN 60
           MHF NANFASSS I TA+LPLPSP LACFRISHR+THRS + SS+FEF  RR+LRV   N
Sbjct: 1   MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPN 60

Query: 61  SSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAAL DNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEDMPSLKEVALNILPSS 326
           NKFVCVHQQE+MPSLKEVALNILPSS
Sbjct: 301 NKFVCVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of BhiUN403G4 vs. TrEMBL
Match: tr|A0A1S3BK29|A0A1S3BK29_CUCME (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490732 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.0e-168
Identity = 306/337 (90.80%), Postives = 311/337 (92.28%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60
           MHFSNANFASSS I TA+LPL SP LACFRISHRKTHRSF+ SS+FEF  RRNLRV   S
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  -SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGNEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGV 180
           GG EMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGV
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVTVSCSKEKHIQFFPEANEVKFARNTAFEGV 180

Query: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240
           SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN
Sbjct: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240

Query: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCY 300
           TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR Y
Sbjct: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY 300

Query: 301 PGPWKVLRKVRNKFVCVHQQEDMPSLKEVALNILPSS 326
           PGPWKVLRKVRNK  CVHQQE+MPSLKEVALNILPSS
Sbjct: 301 PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS 337

[Close]

BLAST of BhiUN403G4 vs. TrEMBL
Match: tr|A0A1S4DXY8|A0A1S4DXY8_CUCME (protein LOW PSII ACCUMULATION 3, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490732 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 2.8e-147
Identity = 269/293 (91.81%), Postives = 272/293 (92.83%), Query Frame = 0


Query: 45  LFEFKARRNLRVSANS-SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLME 104
           +FEF  RRNLRV   S SNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLME
Sbjct: 1   MFEFMPRRNLRVLPPSLSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLME 60

Query: 105 IEFPTAGLESVPGDGEGGNEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFP 164
           IEFPTAGLESVPGDGEGG EMTESMQLIRQFCDCFIDPLKATRTRV           FFP
Sbjct: 61  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVTVSCSKEKHIQFFP 120

Query: 165 EANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNV 224
           EANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNV
Sbjct: 121 EANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNV 180

Query: 225 NEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYY 284
           NEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYY
Sbjct: 181 NEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYY 240

Query: 285 IHNFKGQKGGVLFRCYPGPWKVLRKVRNKFVCVHQQEDMPSLKEVALNILPSS 326
           IHNFKGQKGGVLFR YPGPWKVLRKVRNK  CVHQQE+MPSLKEVALNILPSS
Sbjct: 241 IHNFKGQKGGVLFRSYPGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS 293

[Close]

BLAST of BhiUN403G4 vs. TrEMBL
Match: tr|D7U3R3|D7U3R3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0033g00230 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 3.8e-128
Identity = 241/325 (74.15%), Postives = 263/325 (80.92%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60
           M  S    AS  +IP  I  L +P +   R    K   SF    +  FK  RNL   ANS
Sbjct: 1   MTLSTIPIASRISIP--IPSLQNPKVLSCRSFQVKKDGSFCGPKIAAFKMSRNLEFKANS 60

Query: 61  SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
            +  SS AS   +VPFP DYS++L QAK+ATE AL+D KQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  VSGDSS-ASVGFNVPFPSDYSEILEQAKEATELALKDKKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSF 180
           G EMT SMQLIR+FCD FI+P KATRTR+FFPEANEVKFAR +AF G SFKLDYLTKPS 
Sbjct: 121 GIEMTGSMQLIREFCDIFINPEKATRTRIFFPEANEVKFARQSAFGGASFKLDYLTKPSL 180

Query: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL 240
           FEDFGFV KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELY EAV NT RKLIIFNGEL
Sbjct: 181 FEDFGFVTKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYNEAVVNTARKLIIFNGEL 240

Query: 241 DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRN 300
           DRIRSGYYPPFFYPKLAAL K+L PKMETVYYIHNFKG+KGG LFRCYPGPWKVLRKVRN
Sbjct: 241 DRIRSGYYPPFFYPKLAALTKSLLPKMETVYYIHNFKGRKGGTLFRCYPGPWKVLRKVRN 300

Query: 301 KFVCVHQQEDMPSLKEVALNILPSS 326
           +++C+HQQE MPSLKEVAL+ILPS+
Sbjct: 301 EYICLHQQEVMPSLKEVALDILPSA 322

[Close]

BLAST of BhiUN403G4 vs. NCBI nr
Match: XP_008448609.1 (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 610.1 bits (1572), Expect = 4.2e-171
Identity = 306/326 (93.87%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60
           MHFSNANFASSS I TA+LPL SP LACFRISHRKTHRSF+ SS+FEF  RRNLRV   S
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  -SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEDMPSLKEVALNILPSS 326
           NK  CVHQQE+MPSLKEVALNILPSS
Sbjct: 301 NKLACVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of BhiUN403G4 vs. NCBI nr
Match: XP_011650318.1 (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus] >XP_011650319.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus] >KGN55700.1 hypothetical protein Csa_3G006620 [Cucumis sativus])

HSP 1 Score: 606.7 bits (1563), Expect = 4.7e-170
Identity = 304/326 (93.25%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRV-SAN 60
           MHF NANFASSS I TA+LPLPSP LACFRISHR+THRS + SS+FEF  RR+LRV   N
Sbjct: 1   MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPN 60

Query: 61  SSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAAL DNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180
           GG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPS 180

Query: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240
           FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE
Sbjct: 181 FFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGE 240

Query: 241 LDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVR 300
           LDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Sbjct: 241 LDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR 300

Query: 301 NKFVCVHQQEDMPSLKEVALNILPSS 326
           NKFVCVHQQE+MPSLKEVALNILPSS
Sbjct: 301 NKFVCVHQQEEMPSLKEVALNILPSS 326

[Close]

BLAST of BhiUN403G4 vs. NCBI nr
Match: XP_008448608.1 (PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 601.7 bits (1550), Expect = 1.5e-168
Identity = 306/337 (90.80%), Postives = 311/337 (92.28%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60
           MHFSNANFASSS I TA+LPL SP LACFRISHRKTHRSF+ SS+FEF  RRNLRV   S
Sbjct: 1   MHFSNANFASSSTISTAVLPLSSPELACFRISHRKTHRSFVSSSMFEFMPRRNLRVLPPS 60

Query: 61  -SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120
            SNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE
Sbjct: 61  LSNRQNSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGE 120

Query: 121 GGNEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGV 180
           GG EMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGV
Sbjct: 121 GGIEMTESMQLIRQFCDCFIDPLKATRTRVTVSCSKEKHIQFFPEANEVKFARNTAFEGV 180

Query: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240
           SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN
Sbjct: 181 SFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQN 240

Query: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCY 300
           TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFR Y
Sbjct: 241 TTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRSY 300

Query: 301 PGPWKVLRKVRNKFVCVHQQEDMPSLKEVALNILPSS 326
           PGPWKVLRKVRNK  CVHQQE+MPSLKEVALNILPSS
Sbjct: 301 PGPWKVLRKVRNKLACVHQQEEMPSLKEVALNILPSS 337

[Close]

BLAST of BhiUN403G4 vs. NCBI nr
Match: XP_022923333.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata])

HSP 1 Score: 598.6 bits (1542), Expect = 1.3e-167
Identity = 296/325 (91.08%), Postives = 305/325 (93.85%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60
           M+FSNANF SSS IP A+LPLPS N ACFR+SHRK HRS L SS+ EF A RNLRV +NS
Sbjct: 1   MYFSNANFVSSSTIPAAVLPLPSRNYACFRMSHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR+SS+ STD DVPFPRDY DLL+QAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSF 180
           G EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSF
Sbjct: 121 GIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL 240
           FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGEL
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVANTARKLIIFNGEL 240

Query: 241 DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRN 300
           DRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRN
Sbjct: 241 DRIRSGYYPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRN 300

Query: 301 KFVCVHQQEDMPSLKEVALNILPSS 326
           KFVCVHQQ+DMPSLKEVALNILPSS
Sbjct: 301 KFVCVHQQQDMPSLKEVALNILPSS 325

[Close]

BLAST of BhiUN403G4 vs. NCBI nr
Match: XP_023553103.1 (protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023553104.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596.7 bits (1537), Expect = 4.9e-167
Identity = 295/325 (90.77%), Postives = 305/325 (93.85%), Query Frame = 0


Query: 1   MHFSNANFASSSAIPTAILPLPSPNLACFRISHRKTHRSFLFSSLFEFKARRNLRVSANS 60
           M+FSNANF SSS IP A+LPLPS N ACFR+SHRK HRS L SS+ EF A RNLRV +NS
Sbjct: 1   MYFSNANFVSSSTIPAAVLPLPSRNFACFRMSHRKIHRSLLSSSVLEFMAGRNLRVLSNS 60

Query: 61  SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120
           SNR+SS+ STD DVPFPRDY DLL+QAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG
Sbjct: 61  SNRESSDTSTDFDVPFPRDYFDLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEG 120

Query: 121 GNEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSF 180
           G EMT SMQLIRQFCDCFI+PLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSF
Sbjct: 121 GIEMTGSMQLIRQFCDCFIEPLKATRTRVFFPEANEVKFARNTAFEGASFKLDYLTKPSF 180

Query: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGEL 240
           FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGEL
Sbjct: 181 FEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVANTTRKLIIFNGEL 240

Query: 241 DRIRSGYYPPFFYPKLAALMKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRN 300
           DRIRSGYYPPFFYPKLAAL KTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRN
Sbjct: 241 DRIRSGYYPPFFYPKLAALTKTLFPKMETVYYIHNFKGQKGGVLFRCYPGPWKVLRKVRN 300

Query: 301 KFVCVHQQEDMPSLKEVALNILPSS 326
           KFVCVHQQ+DMPSLKEVALNILPSS
Sbjct: 301 KFVCVHQQQDMPSLKEVALNILPSS 325

The following BLAST results are available for this feature:

BLAST of BhiUN403G4 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48790.1	7.6e-122	77.34	Domain of unknown function (DUF1995)	[more]
AT1G73060.1	8.6e-09	25.40	Low PSII Accumulation 3	[more]

BLAST of BhiUN403G4 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8H0W0\|LPA3_ARATH	1.6e-07	25.40	Protein LOW PSII ACCUMULATION 3, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of BhiUN403G4 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BKQ4\|A0A1S3BKQ4_CUCME	2.8e-171	93.87	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 OS=Cucumis melo OX=365...	[more]
tr\|A0A0A0L151\|A0A0A0L151_CUCSA	3.1e-170	93.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006620 PE=4 SV=1	[more]
tr\|A0A1S3BK29\|A0A1S3BK29_CUCME	1.0e-168	90.80	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 OS=Cucumis melo OX=365...	[more]
tr\|A0A1S4DXY8\|A0A1S4DXY8_CUCME	2.8e-147	91.81	protein LOW PSII ACCUMULATION 3, chloroplastic isoform X3 OS=Cucumis melo OX=365...	[more]
tr\|D7U3R3\|D7U3R3_VITVI	3.8e-128	74.15	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0033g00230 PE=4 SV=...	[more]

BLAST of BhiUN403G4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448609.1	4.2e-171	93.87	PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis me...	[more]
XP_011650318.1	4.7e-170	93.25	PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus] >XP_...	[more]
XP_008448608.1	1.5e-168	90.80	PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis me...	[more]
XP_022923333.1	1.3e-167	91.08	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]	[more]
XP_023553103.1	4.9e-167	90.77	protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo] >XP_...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018962	DUF1995

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0008150	biological_process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009735	response to cytokinin
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0009571	proplastid stroma
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN403M4	BhiUN403M4	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018962	Domain of unknown function DUF1995	PFAM	PF09353	DUF1995	coord: 77..318 e-value: 3.2E-46 score: 157.7
None	No IPR available	PANTHER	PTHR34051	FAMILY NOT NAMED	coord: 50..324
None	No IPR available	PANTHER	PTHR34051:SF1	SUBFAMILY NOT NAMED	coord: 50..324

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
BhiUN403G4	Csa3G006620	Cucumber (Chinese Long) v2	cuwgoB338
BhiUN403G4	MELO3C013804	Melon (DHL92) v3.5.1	mewgoB562
BhiUN403G4	ClCG10G001120	Watermelon (Charleston Gray)	wcgwgoB132
BhiUN403G4	CSPI03G01110	Wild cucumber (PI 183967)	cpiwgoB341
BhiUN403G4	Cucsa.322270	Cucumber (Gy14) v1	cgywgoB656
BhiUN403G4	CmaCh06G006110	Cucurbita maxima (Rimu)	cmawgoB1043
BhiUN403G4	MELO3C013804.2	Melon (DHL92) v3.6.1	medwgoB566
BhiUN403G4	Carg16297	Silver-seed gourd	carwgoB0799
BhiUN403G4	CsaV3_3G001140	Cucumber (Chinese Long) v3	cucwgoB344
BhiUN403G4	Cla008855	Watermelon (97103) v1	wgowmB576
BhiUN403G4	Cla97C10G185740	Watermelon (97103) v2	wgowmbB549

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None