BhiUN316G17 (gene) Wax gourd

NameBhiUN316G17
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptiontraB domain-containing protein
LocationContig316 : 248793 .. 250114 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGATGATTACTTGGAAGAAACCCCCAGGCAAAAGCTACGAGGAAGCATGCCATTGTGGAAAAAGAGGTAAGACTTTTATAATCTTCCTTTGTCTGCTTCCATAACTATGACACTCACATGTTTTGAGGGACTTTCTTGAGACATTTCTGTCTCTGTTTATTTTCATATGACATCGTCACTGAGGTACATGTGAGAATTTGATTGAAGTATCAGTCTTGGAAGCTTAAGTCGTAGGTTGTTATTTGGGCATTGCTATTATATCACATAAATAAGTGGATTATACTTCGTAGTATGTTAACTTTTAACACAAATAAAGAAAATCCTGATTCCCCTCTCAGATTCATATCTTTTTTTGTGACTGAATTGATGGCTCTGATATGCTTTAGTGGATATAGGCATAATTTTTCTCGGTTCTTGGTAACTGGCTAAACGATCTTTGGACTTTGACATCTTATACACCATCATTTTGTGTGATATTGACAATTTTATCTTCATCAATTATTATCTTCATCATCTTTCTTTGTGTGTTTTTTTTTTTTAAAATTAACATCCTTTTTTTTTCCTAATTCGTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAAATCAACATGATCTTAAATTATTGCAGGCATTTGTTCTAGAGCTGGTATCATGTATACTTTAGATACCGGTGAGCCAGACCAAAAACTGAAATTCAACATTTTCTCCTTGAGTGAGGATGGTTTTTTGGCTGTTGTTGGTCGCAGCATAAACCTAGGTAAGGAGTACCATTTTGTATGATTGTTTTTGGCATAAAAGTTGTCTAAAACTTTCTCATTTTTCAGGAGGCCAAATTGCTCTTGCTTTGCGTCTGCTTCTCACAGTTTTTTCATCTAAAATTTCATCAGATGTCAACCATCCTTTTGGAGACGAGGTACTTTAATAAACAACTTTTCAAATGACCAAGTAATTTCTAGATGTACCAATGTATAGTTCTGCATATCTACAACTAGTTCATGAAACTTTCATTAAGCATGCAGTTTCGAGCTGCTCGTAAAGCATCTAAAGAAGTTGGTGCTCAAATAGTTTTGGGGGACCAGCCAATTGAAATAACTGTATGTATTTTCTCCTGCAAGATGATACTATTATGTTTTGGCAAGTGCAAATGACTGTAGAATTTGGCCCATTCAGATAACTTAATCCATTTGATCACTCCAATATGATTTATTTATTCATGCAGCTAGAAAGGGCATGGAATGCTCTAATTGGACTGAAGTTGAGTTTAGTAAGCTCCGTTGTTCGTGGAATAACATCGTAA

mRNA sequence

ATGGTGATGATTACTTGGAAGAAACCCCCAGGCAAAAGCTACGAGGAAGCATGCCATTGTGGAAAAAGAGGCATTTGTTCTAGAGCTGGTATCATGTATACTTTAGATACCGGTGAGCCAGACCAAAAACTGAAATTCAACATTTTCTCCTTGAGTGAGGATGGTTTTTTGGCTGTTGTTGGTCGCAGCATAAACCTAGGAGGCCAAATTGCTCTTGCTTTGCGTCTGCTTCTCACAGTTTTTTCATCTAAAATTTCATCAGATGTCAACCATCCTTTTGGAGACGAGTTTCGAGCTGCTCGTAAAGCATCTAAAGAAGTTGGTGCTCAAATAGTTTTGGGGGACCAGCCAATTGAAATAACTCTAGAAAGGGCATGGAATGCTCTAATTGGACTGAAGTTGAGTTTAGTAAGCTCCGTTGTTCGTGGAATAACATCGTAA

Coding sequence (CDS)

ATGGTGATGATTACTTGGAAGAAACCCCCAGGCAAAAGCTACGAGGAAGCATGCCATTGTGGAAAAAGAGGCATTTGTTCTAGAGCTGGTATCATGTATACTTTAGATACCGGTGAGCCAGACCAAAAACTGAAATTCAACATTTTCTCCTTGAGTGAGGATGGTTTTTTGGCTGTTGTTGGTCGCAGCATAAACCTAGGAGGCCAAATTGCTCTTGCTTTGCGTCTGCTTCTCACAGTTTTTTCATCTAAAATTTCATCAGATGTCAACCATCCTTTTGGAGACGAGTTTCGAGCTGCTCGTAAAGCATCTAAAGAAGTTGGTGCTCAAATAGTTTTGGGGGACCAGCCAATTGAAATAACTCTAGAAAGGGCATGGAATGCTCTAATTGGACTGAAGTTGAGTTTAGTAAGCTCCGTTGTTCGTGGAATAACATCGTAA

Protein sequence

MVMITWKKPPGKSYEEACHCGKRGICSRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKISSDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGLKLSLVSSVVRGITS
BLAST of BhiUN316G17 vs. TAIR10
Match: AT5G52030.2 (TraB family protein)

HSP 1 Score: 147.5 bits (371), Expect = 6.4e-36
Identity = 82/120 (68.33%), Postives = 94/120 (78.33%), Query Frame = 0

Query: 29  AGIMYTLDT-GEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKISS 88
           AGIMYT    GE DQ LK    SL+  GFL  VGRS++LGGQ ALALRLLL VFSSK+SS
Sbjct: 142 AGIMYTSSVGGEVDQNLKSGELSLTGTGFLGAVGRSLDLGGQTALALRLLLAVFSSKLSS 201

Query: 89  DVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNAL-IGLKLSLVSSVVRGITS 147
             + PFGDEFRAARKAS+EVGAQ+VLGD+PIEITL+RAWN+L  G K +LV +V R ITS
Sbjct: 202 VADRPFGDEFRAARKASEEVGAQLVLGDRPIEITLQRAWNSLKWGEKFNLVMAVTRVITS 261

BLAST of BhiUN316G17 vs. TAIR10
Match: AT1G05270.1 (TraB family protein)

HSP 1 Score: 44.3 bits (103), Expect = 7.6e-05
Identity = 19/46 (41.30%), Postives = 32/46 (69.57%), Query Frame = 0

Query: 81  FSSKISSDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAW 127
           F +KI+S +    G EFR A + + + G +++LGD+P++ITL+R W
Sbjct: 182 FLAKIASHLEVFPGAEFRVAYEEAIKYGGKVILGDRPVQITLKRTW 227

BLAST of BhiUN316G17 vs. TrEMBL
Match: tr|A0A1S3AXQ2|A0A1S3AXQ2_CUCME (traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103484044 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.9e-48
Identity = 106/121 (87.60%), Postives = 110/121 (90.91%), Query Frame = 0

Query: 27  SRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKIS 86
           SRAGIMYTLDTGEPDQKLK N+FSLS DGFL  VGRSINLGGQ ALALRLLL VFSSKIS
Sbjct: 127 SRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKIS 186

Query: 87  SDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGL-KLSLVSSVVRGIT 146
           SDVN PFGDEFRAARKAS+EVGAQIVLGD+PIEITLERAWNAL    KLSLVSSV+RGIT
Sbjct: 187 SDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVIRGIT 246

BLAST of BhiUN316G17 vs. TrEMBL
Match: tr|A0A0A0L5T2|A0A0A0L5T2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180280 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46
Identity = 104/119 (87.39%), Postives = 108/119 (90.76%), Query Frame = 0

Query: 29  AGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKISSD 88
           AGIMYTLDTGEPDQKLK N+FSLS DGFL  V RSINLGGQ ALALRLLL VFSSKISSD
Sbjct: 33  AGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVVRSINLGGQTALALRLLLAVFSSKISSD 92

Query: 89  VNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGL-KLSLVSSVVRGITS 147
           VN PFGDEFRAARKAS+EVGAQIVLGD+PIEITLERAWNALI   KLSLVSSV+RGITS
Sbjct: 93  VNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALIWTEKLSLVSSVIRGITS 151

BLAST of BhiUN316G17 vs. TrEMBL
Match: tr|B9R9G9|B9R9G9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1497430 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-40
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 0

Query: 28  RAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKISS 87
           +AGIMYT + GE +Q+L+ N+FSLS +GF   VGRSINLGGQ ALALRLLL +FSSKIS+
Sbjct: 141 KAGIMYTSNEGEDNQQLRSNMFSLSGNGFFGAVGRSINLGGQTALALRLLLALFSSKISN 200

Query: 88  DVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGL-KLSLVSSVVRGITS 147
           DVN PFGDEFRAARK S+E+GAQIVLGD+PIEITLERAWNAL    KLSLVSSVVRGITS
Sbjct: 201 DVNRPFGDEFRAARKVSEEIGAQIVLGDRPIEITLERAWNALKWKEKLSLVSSVVRGITS 260

BLAST of BhiUN316G17 vs. TrEMBL
Match: tr|A0A2P6SN04|A0A2P6SN04_ROSCH (Putative pheromone shutdown, TraB OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0376671 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.1e-40
Identity = 94/128 (73.44%), Postives = 102/128 (79.69%), Query Frame = 0

Query: 20  CGKRGICSRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLT 79
           C  R    RAGIMY     E D +LK N+FSLS +GF   VGRSINLGGQ ALALR+LL 
Sbjct: 124 CRSRQPIFRAGIMYASMDDESDHQLKSNMFSLSGNGFFGAVGRSINLGGQAALALRVLLA 183

Query: 80  VFSSKISSDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGL-KLSLVS 139
           VFSSKISSD N PFGDEFRAARKAS+EVGAQIVLGD+PIEITLERAWN+LI   KLSLV+
Sbjct: 184 VFSSKISSDTNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNSLIWTEKLSLVT 243

Query: 140 SVVRGITS 147
           SV RGITS
Sbjct: 244 SVFRGITS 251

BLAST of BhiUN316G17 vs. TrEMBL
Match: tr|A0A2P4LKI8|A0A2P4LKI8_QUESU (Isoform 2 of trab domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_44098 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.8e-40
Identity = 89/121 (73.55%), Postives = 102/121 (84.30%), Query Frame = 0

Query: 27  SRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKIS 86
           SRAGIMYT + GE  Q+L+ N+FSLS  GF   VGRSINLGGQ ALALRLLL +FSSK+S
Sbjct: 126 SRAGIMYTSNDGEVGQQLRSNMFSLSGTGFFGAVGRSINLGGQTALALRLLLAIFSSKLS 185

Query: 87  SDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGL-KLSLVSSVVRGIT 146
           SD+N PFGDEFRAARK S+E+GAQIVLGD+PIEITLERAWN+L    KLSLV+SV+ GIT
Sbjct: 186 SDINRPFGDEFRAARKISEEIGAQIVLGDRPIEITLERAWNSLTWTEKLSLVTSVIHGIT 245

BLAST of BhiUN316G17 vs. NCBI nr
Match: XP_008439166.1 (PREDICTED: traB domain-containing protein [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-48
Identity = 106/121 (87.60%), Postives = 110/121 (90.91%), Query Frame = 0

Query: 27  SRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKIS 86
           SRAGIMYTLDTGEPDQKLK N+FSLS DGFL  VGRSINLGGQ ALALRLLL VFSSKIS
Sbjct: 127 SRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSKIS 186

Query: 87  SDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGL-KLSLVSSVVRGIT 146
           SDVN PFGDEFRAARKAS+EVGAQIVLGD+PIEITLERAWNAL    KLSLVSSV+RGIT
Sbjct: 187 SDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWTEKLSLVSSVIRGIT 246

BLAST of BhiUN316G17 vs. NCBI nr
Match: XP_023542004.1 (traB domain-containing protein isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 105/123 (85.37%), Postives = 110/123 (89.43%), Query Frame = 0

Query: 25  ICSRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSK 84
           ICSRAGIMYTL+TGEP QKLK N+FSLS DGFL  VGRSINLGGQ ALALRLLL VFSSK
Sbjct: 11  ICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAVFSSK 70

Query: 85  ISSDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALI-GLKLSLVSSVVRG 144
           ISSDVN PFG EFRAARKAS+EVGAQIVLGD+PIEITLERAWNAL    KLSLVSSV+RG
Sbjct: 71  ISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRG 130

Query: 145 ITS 147
           ITS
Sbjct: 131 ITS 133

BLAST of BhiUN316G17 vs. NCBI nr
Match: XP_004140793.1 (PREDICTED: traB domain-containing protein isoform X1 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 1.7e-47
Identity = 106/121 (87.60%), Postives = 110/121 (90.91%), Query Frame = 0

Query: 27  SRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSKIS 86
           SRAGIMYTLDTGEPDQKLK N+FSLS DGFL  V RSINLGGQ ALALRLLL VFSSKIS
Sbjct: 149 SRAGIMYTLDTGEPDQKLKSNMFSLSGDGFLGAVVRSINLGGQTALALRLLLAVFSSKIS 208

Query: 87  SDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALIGL-KLSLVSSVVRGIT 146
           SDVN PFGDEFRAARKAS+EVGAQIVLGD+PIEITLERAWNALI   KLSLVSSV+RGIT
Sbjct: 209 SDVNRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNALIWTEKLSLVSSVIRGIT 268

BLAST of BhiUN316G17 vs. NCBI nr
Match: XP_022945050.1 (traB domain-containing protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 197.6 bits (501), Expect = 2.9e-47
Identity = 104/123 (84.55%), Postives = 109/123 (88.62%), Query Frame = 0

Query: 25  ICSRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSK 84
           ICSRAGIMYTL+TGEP QKLK N+FSLS DGFL  VGRSINLGGQ ALALRLLL  FSSK
Sbjct: 11  ICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSK 70

Query: 85  ISSDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALI-GLKLSLVSSVVRG 144
           ISSDVN PFG EFRAARKAS+EVGAQIVLGD+PIEITLERAWNAL    KLSLVSSV+RG
Sbjct: 71  ISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNQKLSLVSSVIRG 130

Query: 145 ITS 147
           ITS
Sbjct: 131 ITS 133

BLAST of BhiUN316G17 vs. NCBI nr
Match: XP_022968023.1 (traB domain-containing protein isoform X2 [Cucurbita maxima])

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-47
Identity = 104/123 (84.55%), Postives = 109/123 (88.62%), Query Frame = 0

Query: 25  ICSRAGIMYTLDTGEPDQKLKFNIFSLSEDGFLAVVGRSINLGGQIALALRLLLTVFSSK 84
           ICSRAGIMYTL+TGEP QKLK N+FSLS DGFL  VGRSINLGGQ ALALRLLL  FSSK
Sbjct: 11  ICSRAGIMYTLETGEPHQKLKSNMFSLSGDGFLGAVGRSINLGGQTALALRLLLAAFSSK 70

Query: 85  ISSDVNHPFGDEFRAARKASKEVGAQIVLGDQPIEITLERAWNALI-GLKLSLVSSVVRG 144
           ISSDVN PFG EFRAARKAS+EVGAQIVLGD+PIEITLERAWNAL    KLSLVSSV+RG
Sbjct: 71  ISSDVNRPFGSEFRAARKASEEVGAQIVLGDRPIEITLERAWNALTWNEKLSLVSSVIRG 130

Query: 145 ITS 147
           ITS
Sbjct: 131 ITS 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT5G52030.26.4e-3668.33TraB family protein[more]
AT1G05270.17.6e-0541.30TraB family protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3AXQ2|A0A1S3AXQ2_CUCME3.9e-4887.60traB domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103484044 PE=4 SV=1[more]
tr|A0A0A0L5T2|A0A0A0L5T2_CUCSA1.3e-4687.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G180280 PE=4 SV=1[more]
tr|B9R9G9|B9R9G9_RICCO1.8e-4076.67Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1497430 PE=4 SV=1[more]
tr|A0A2P6SN04|A0A2P6SN04_ROSCH5.1e-4073.44Putative pheromone shutdown, TraB OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g03... [more]
tr|A0A2P4LKI8|A0A2P4LKI8_QUESU8.8e-4073.55Isoform 2 of trab domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_4... [more]
Match NameE-valueIdentityDescription
XP_008439166.15.9e-4887.60PREDICTED: traB domain-containing protein [Cucumis melo][more]
XP_023542004.11.0e-4785.37traB domain-containing protein isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_004140793.11.7e-4787.60PREDICTED: traB domain-containing protein isoform X1 [Cucumis sativus][more]
XP_022945050.12.9e-4784.55traB domain-containing protein isoform X2 [Cucurbita moschata][more]
XP_022968023.13.9e-4784.55traB domain-containing protein isoform X2 [Cucurbita maxima][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
BhiUN316M17BhiUN316M17mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21530:SF1TRAB FAMILY PROTEINcoord: 26..146
NoneNo IPR availablePANTHERPTHR21530PHEROMONE SHUTDOWN PROTEINcoord: 26..146

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None