BhiUN179G6 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	BhiUN179G6
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Cotton fiber protein
Location	Contig179 : 64541 .. 64876 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCTGCTTGAAGAAGACGCTGACGAAACTCACTGCATTTTTCCGCCGCTGCCTCGTTCGCCGGCGACGTTTTCTACGGCTGAGATCATTCTTTCCCGACGATCGGATGGTTGGGATACGGATTGTCTTGGACGATCAGAGGAAAATCGCTGAGAAACTCGAACGTGCTCCGAATTCAAGCTATGGAAGGTGTGAAGAGGATGTGGATCAGCGAGCGGAGATTTTTATCGAGAATTTTCGCCGTCAATTGAGGTTAGAGAGACAAATTTCTTTGCAATTGAAGTATTATAGAGTTAATAGCTATGAAACAGAGTATGAGGAGACATCGTAG

mRNA sequence

ATGGCATCCTGCTTGAAGAAGACGCTGACGAAACTCACTGCATTTTTCCGCCGCTGCCTCGTTCGCCGGCGACGTTTTCTACGGCTGAGATCATTCTTTCCCGACGATCGGATGGTTGGGATACGGATTGTCTTGGACGATCAGAGGAAAATCGCTGAGAAACTCGAACGTGCTCCGAATTCAAGCTATGGAAGGTGTGAAGAGGATGTGGATCAGCGAGCGGAGATTTTTATCGAGAATTTTCGCCGTCAATTGAGGTTAGAGAGACAAATTTCTTTGCAATTGAAGTATTATAGAGTTAATAGCTATGAAACAGAGTATGAGGAGACATCGTAG

Coding sequence (CDS)

ATGGCATCCTGCTTGAAGAAGACGCTGACGAAACTCACTGCATTTTTCCGCCGCTGCCTCGTTCGCCGGCGACGTTTTCTACGGCTGAGATCATTCTTTCCCGACGATCGGATGGTTGGGATACGGATTGTCTTGGACGATCAGAGGAAAATCGCTGAGAAACTCGAACGTGCTCCGAATTCAAGCTATGGAAGGTGTGAAGAGGATGTGGATCAGCGAGCGGAGATTTTTATCGAGAATTTTCGCCGTCAATTGAGGTTAGAGAGACAAATTTCTTTGCAATTGAAGTATTATAGAGTTAATAGCTATGAAACAGAGTATGAGGAGACATCGTAG

Protein sequence

MASCLKKTLTKLTAFFRRCLVRRRRFLRLRSFFPDDRMVGIRIVLDDQRKIAEKLERAPNSSYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNSYETEYEETS

Homology

[Close]

BLAST of BhiUN179G6 vs. TAIR10
Match: AT5G57510.1 (unknown protein)

HSP 1 Score: 48.1 bits (113), Expect = 4.0e-06
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 67  EEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNSYETEY 108
           +ED+D +AE+FI NF RQL++ERQISL+LKY + N+    Y
Sbjct: 87  DEDIDNKAEMFIANFYRQLKIERQISLELKYCQGNNQSFNY 127

[Close]

BLAST of BhiUN179G6 vs. TrEMBL
Match: tr|A0A0A0L4Z8|A0A0A0L4Z8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.9e-29
Identity = 82/117 (70.09%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MASCLKKTLTKLTAFFRRCLVRRRRFLRLRSF-FPDDRMVGIRIVLDDQRKIAE-----K 60
           MAS L+K L KL A  R CL+ R+R  RL SF   DD+ VGIRIVL+DQ +IAE     K
Sbjct: 8   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 67

Query: 61  LERAPNSSYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNSYETEYEETS 112
           LERA +S YG  EEDVDQRAEIFIENFRRQLRLERQISLQL+YYRVNSYETEYE+ S
Sbjct: 68  LERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQRS 124

[Close]

BLAST of BhiUN179G6 vs. TrEMBL
Match: tr|A0A0A0L6A3|A0A0A0L6A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.7e-15
Identity = 62/114 (54.39%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 1   MASCLKKTLTKLTAFFRRC-LVRRRRFLRLRSFFPDDRMVGIRIVLDDQRKIAEKLERAP 60
           MA  L++TL KL AF R C L+RRR   R R+   DD             + A  LER  
Sbjct: 1   MALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDD-------------QTARNLERDS 60

Query: 61  NSSYGRCEE---DVDQRAEIFIENFRRQLRLERQISLQLKYYRV--NSYETEYE 109
           +S Y  CEE   DVD RAEIFIENFRRQLRLERQISLQL+ Y V  NS+ET+YE
Sbjct: 61  SSRYESCEEFEDDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYE 101

[Close]

BLAST of BhiUN179G6 vs. TrEMBL
Match: tr|A0A2C9UBN9|A0A2C9UBN9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G135500 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-08
Identity = 49/92 (53.26%), Postives = 60/92 (65.22%), Query Frame = 0


Query: 18  RCLVRRRRFLRLRSFFPDDRMVGIRIVLDDQRKIAEKLERA--PNSSYGRCEEDVDQRAE 77
           R + RRRR L   SF  +DR+ G+   ++D      K  RA     SY   E+D+DQRAE
Sbjct: 37  RNVSRRRRRL---SF--NDRL-GLHGCIEDVESDENKRVRALQRTRSYA-SEDDIDQRAE 96

Query: 78  IFIENFRRQLRLERQISLQLKYYRVNSYETEY 108
           IFIENFRRQL LERQISLQL+YYR NS+  +Y
Sbjct: 97  IFIENFRRQLLLERQISLQLRYYRGNSFTRDY 121

[Close]

BLAST of BhiUN179G6 vs. TrEMBL
Match: tr|A0A2K1WTY1|A0A2K1WTY1_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_018G006800v3 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.7e-08
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 46  DDQRKIAEKLERAPNSSYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNSYET 105
           D Q K    LER  +      ++DVD+RAEIFI NFRRQL +ERQ+SLQL+YYR NS+  
Sbjct: 107 DHQSKPVRALERVRSHDGSSSDDDVDKRAEIFITNFRRQLLMERQVSLQLRYYRGNSFGR 166

Query: 106 EY 108
           +Y
Sbjct: 167 DY 168

[Close]

BLAST of BhiUN179G6 vs. TrEMBL
Match: tr|B9N684|B9N684_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G273500v3 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-07
Identity = 30/46 (65.22%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 62  SYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNSYETEY 108
           SYG  +ED+D+RAEIFI NFR+QL +ERQ+SLQL+YYR NS+  +Y
Sbjct: 83  SYGSSDEDIDKRAEIFINNFRQQLLIERQVSLQLRYYRGNSFGRDY 128

[Close]

BLAST of BhiUN179G6 vs. NCBI nr
Match: KGN55687.1 (hypothetical protein Csa_3G004530 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 82/117 (70.09%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MASCLKKTLTKLTAFFRRCLVRRRRFLRLRSF-FPDDRMVGIRIVLDDQRKIAE-----K 60
           MAS L+K L KL A  R CL+ R+R  RL SF   DD+ VGIRIVL+DQ +IAE     K
Sbjct: 8   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 67

Query: 61  LERAPNSSYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNSYETEYEETS 112
           LERA +S YG  EEDVDQRAEIFIENFRRQLRLERQISLQL+YYRVNSYETEYE+ S
Sbjct: 68  LERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQRS 124

[Close]

BLAST of BhiUN179G6 vs. NCBI nr
Match: XP_011652707.1 (PREDICTED: uncharacterized protein LOC105435054 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 82/117 (70.09%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 1   MASCLKKTLTKLTAFFRRCLVRRRRFLRLRSF-FPDDRMVGIRIVLDDQRKIAE-----K 60
           MAS L+K L KL A  R CL+ R+R  RL SF   DD+ VGIRIVL+DQ +IAE     K
Sbjct: 1   MASRLQKALMKLKAVLRLCLLPRQRSRRLGSFDSDDDQKVGIRIVLEDQSRIAESSFVRK 60

Query: 61  LERAPNSSYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNSYETEYEETS 112
           LERA +S YG  EEDVDQRAEIFIENFRRQLRLERQISLQL+YYRVNSYETEYE+ S
Sbjct: 61  LERASSSRYGGYEEDVDQRAEIFIENFRRQLRLERQISLQLRYYRVNSYETEYEQRS 117

[Close]

BLAST of BhiUN179G6 vs. NCBI nr
Match: XP_022145292.1 (uncharacterized protein LOC111014780 [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 9.2e-17
Identity = 59/107 (55.14%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 5   LKKTLTKLTAFFR----RCLVRRRRFLRLRSFFPDDRMVGIRIVLDDQRKIAE-----KL 64
           LKK + K+TA  R     CL RRR   RLRSF   DR VG+R  L+D+ +I E     +L
Sbjct: 12  LKKAVRKITALLRLNLSLCLARRRPSGRLRSFSFSDRTVGLRSFLEDE-EIGENCSMRRL 71

Query: 65  ERAPNSSYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRVNS 103
           ERA +  YG  E+DVD+R++IFI+NF R+LRLERQISLQL+YYR+NS
Sbjct: 72  ERASSLRYGNAEDDVDKRSQIFIDNFLRRLRLERQISLQLRYYRINS 117

[Close]

BLAST of BhiUN179G6 vs. NCBI nr
Match: KGN55686.1 (hypothetical protein Csa_3G004520 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 62/114 (54.39%), Postives = 71/114 (62.28%), Query Frame = 0


Query: 1   MASCLKKTLTKLTAFFRRC-LVRRRRFLRLRSFFPDDRMVGIRIVLDDQRKIAEKLERAP 60
           MA  L++TL KL AF R C L+RRR   R R+   DD             + A  LER  
Sbjct: 1   MALRLEETLNKLKAFLRLCLLLRRRSIYRTRNVLEDD-------------QTARNLERDS 60

Query: 61  NSSYGRCEE---DVDQRAEIFIENFRRQLRLERQISLQLKYYRV--NSYETEYE 109
           +S Y  CEE   DVD RAEIFIENFRRQLRLERQISLQL+ Y V  NS+ET+YE
Sbjct: 61  SSRYESCEEFEDDVDHRAEIFIENFRRQLRLERQISLQLRLYGVNNNSFETDYE 101

[Close]

BLAST of BhiUN179G6 vs. NCBI nr
Match: XP_021670131.1 (uncharacterized protein LOC110657276 [Hevea brasiliensis])

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 41  IRIVLDDQRKIAEKLERAPNSSYGRCEEDVDQRAEIFIENFRRQLRLERQISLQLKYYRV 100
           I  V  DQ K    L+R  + +Y   EED+DQRAEIFIENFRRQL LERQ+SLQL+YYR 
Sbjct: 58  IEDVESDQNKWDRVLQRTKSYAY---EEDIDQRAEIFIENFRRQLLLERQVSLQLRYYRG 117

Query: 101 NSYETEY 108
           NS+  +Y
Sbjct: 118 NSFTRDY 121

The following BLAST results are available for this feature:

BLAST of BhiUN179G6 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G57510.1	4.0e-06	56.10	unknown protein	[more]

BLAST of BhiUN179G6 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of BhiUN179G6 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4Z8\|A0A0A0L4Z8_CUCSA	6.9e-29	70.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004530 PE=4 SV=1	[more]
tr\|A0A0A0L6A3\|A0A0A0L6A3_CUCSA	9.7e-15	54.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G004520 PE=4 SV=1	[more]
tr\|A0A2C9UBN9\|A0A2C9UBN9_MANES	4.0e-08	53.26	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G135500 PE=4 SV=...	[more]
tr\|A0A2K1WTY1\|A0A2K1WTY1_POPTR	6.7e-08	54.84	Uncharacterized protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_018G0...	[more]
tr\|B9N684\|B9N684_POPTR	1.5e-07	65.22	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G273500v3 PE=...	[more]

BLAST of BhiUN179G6 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55687.1	1.0e-28	70.09	hypothetical protein Csa_3G004530 [Cucumis sativus]	[more]
XP_011652707.1	1.0e-28	70.09	PREDICTED: uncharacterized protein LOC105435054 [Cucumis sativus]	[more]
XP_022145292.1	9.2e-17	55.14	uncharacterized protein LOC111014780 [Momordica charantia]	[more]
KGN55686.1	1.5e-14	54.39	hypothetical protein Csa_3G004520 [Cucumis sativus]	[more]
XP_021670131.1	1.9e-09	59.70	uncharacterized protein LOC110657276 [Hevea brasiliensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008480	DUF761_pln

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
BhiUN179M6	BhiUN179M6	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 67..97 e-value: 3.9E-10 score: 39.0
None	No IPR available	PANTHER	PTHR33098	FAMILY NOT NAMED	coord: 48..104
None	No IPR available	PANTHER	PTHR33098:SF3	SUBFAMILY NOT NAMED	coord: 48..104

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
BhiUN179G6	Cucumber (Gy14) v1	cgywgoB655
BhiUN179G6	Cucumber (Gy14) v2	cgybwgoB327
BhiUN179G6	Cucurbita maxima (Rimu)	cmawgoB0450
BhiUN179G6	Cucurbita maxima (Rimu)	cmawgoB1042
BhiUN179G6	Cucurbita moschata (Rifu)	cmowgoB0447
BhiUN179G6	Cucurbita moschata (Rifu)	cmowgoB1036
BhiUN179G6	Cucurbita pepo (Zucchini)	cpewgoB0308
BhiUN179G6	Cucurbita pepo (Zucchini)	cpewgoB1137
BhiUN179G6	Wild cucumber (PI 183967)	cpiwgoB340
BhiUN179G6	Cucumber (Chinese Long) v3	cucwgoB343
BhiUN179G6	Cucumber (Chinese Long) v2	cuwgoB337
BhiUN179G6	Bottle gourd (USVL1VR-Ls)	lsiwgoB575
BhiUN179G6	Melon (DHL92) v3.6.1	medwgoB565
BhiUN179G6	Melon (DHL92) v3.5.1	mewgoB561
BhiUN179G6	Watermelon (Charleston Gray)	wcgwgoB131
BhiUN179G6	Watermelon (97103) v2	wgowmbB548
BhiUN179G6	Watermelon (97103) v1	wgowmB575
BhiUN179G6	Silver-seed gourd	carwgoB0517
BhiUN179G6	Silver-seed gourd	carwgoB0798