Bhi12G002251 (gene) Wax gourd

Overview
NameBhi12G002251
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr12 : 79566395 .. 79566868 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTCATGAGTCAGCTTCCAAGATCCTGCTTTATTGAACGAAAAGAGTTTACGCTATCCTTAGACAAGTTTTCTGGAAGCACCATGCTTTTAGTAACAGAGGTGGGTCATTATAAGTCTTTATCTTTATCCTTGACCCTAGATTCCCTTGACTGGCTGAGATCCACCTTGAAAACTCTAATAGCCACACCAAGGACTAATCGCTTTTTCTTGGAAAAACGCTTTCCTGATTACTGGCTGTGGGTGGAAAAAACTCAAAATAGGAAACGGAAATTGGCTGAAGTTTTTCGAGTAGGACGGAAATGTTGCCTGATTCCTGAGGGAGCAGACAAGAACAGAAAGCAAATGAGTTTTTTACCAGCGACAGACGAGGAAAAAGATAAATTACACAAAATTATGTCATCCTTATTGAATGAAGATAGTCCAGTGCGTACGTTTGCTGAAGTACTTTCTCCAAAAAAGTTCACCTGA

mRNA sequence

ATGGGTTTCATGAGTCAGCTTCCAAGATCCTGCTTTATTGAACGAAAAGAGTTTACGCTATCCTTAGACAAGTTTTCTGGAAGCACCATGCTTTTAGTAACAGAGGTGGGTCATTATAAGTCTTTATCTTTATCCTTGACCCTAGATTCCCTTGACTGGCTGAGATCCACCTTGAAAACTCTAATAGCCACACCAAGGACTAATCGCTTTTTCTTGGAAAAACGCTTTCCTGATTACTGGCTGTGGGTGGAAAAAACTCAAAATAGGAAACGGAAATTGGCTGAAGTTTTTCGAGTAGGACGGAAATGTTGCCTGATTCCTGAGGGAGCAGACAAGAACAGAAAGCAAATGAGTTTTTTACCAGCGACAGACGAGGAAAAAGATAAATTACACAAAATTATGTCATCCTTATTGAATGAAGATAGTCCAGTGCGTACGTTTGCTGAAGTACTTTCTCCAAAAAAGTTCACCTGA

Coding sequence (CDS)

ATGGGTTTCATGAGTCAGCTTCCAAGATCCTGCTTTATTGAACGAAAAGAGTTTACGCTATCCTTAGACAAGTTTTCTGGAAGCACCATGCTTTTAGTAACAGAGGTGGGTCATTATAAGTCTTTATCTTTATCCTTGACCCTAGATTCCCTTGACTGGCTGAGATCCACCTTGAAAACTCTAATAGCCACACCAAGGACTAATCGCTTTTTCTTGGAAAAACGCTTTCCTGATTACTGGCTGTGGGTGGAAAAAACTCAAAATAGGAAACGGAAATTGGCTGAAGTTTTTCGAGTAGGACGGAAATGTTGCCTGATTCCTGAGGGAGCAGACAAGAACAGAAAGCAAATGAGTTTTTTACCAGCGACAGACGAGGAAAAAGATAAATTACACAAAATTATGTCATCCTTATTGAATGAAGATAGTCCAGTGCGTACGTTTGCTGAAGTACTTTCTCCAAAAAAGTTCACCTGA

Protein sequence

MGFMSQLPRSCFIERKEFTLSLDKFSGSTMLLVTEVGHYKSLSLSLTLDSLDWLRSTLKTLIATPRTNRFFLEKRFPDYWLWVEKTQNRKRKLAEVFRVGRKCCLIPEGADKNRKQMSFLPATDEEKDKLHKIMSSLLNEDSPVRTFAEVLSPKKFT
Homology
[Close]
BLAST of Bhi12G002251 vs. TrEMBL
Match: tr|E5GB30|E5GB30_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.7e-23
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 0 

Query: 1   MGFMSQLPRSCFIERKEFTLSLDKFSGSTMLLVTEVGHYKSLSLSLTLDSLDWLRSTLKT 60
           M  + QLPRSC IE+K+F LSLD  S    +L+TEVG YKS S+++TL+SL+WL+ST KT
Sbjct: 39  MSSLRQLPRSCTIEKKDFVLSLDNRSRDLKMLITEVGPYKSFSIAVTLESLEWLKSTFKT 98

Query: 61  LIATPRTNRFFLEKRFPDYWLWVEKTQNRKRKLAEVFR 99
           L+ TP T RFFL+KRF +Y LWV+KT NRK +   + R
Sbjct: 99  LLDTPLTTRFFLKKRFEEYCLWVQKTYNRKGRTVVLTR 136

[Close]
BLAST of Bhi12G002251 vs. TrEMBL
Match: tr|A0A0A0KNC5|A0A0A0KNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G465580 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 5.0e-17
Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 0 

Query: 36  VGHYKSLSLSLTLDSLDWLRSTLKTLIATPRTNRFFLEKRFPDYWLWVEKTQNRKRKLAE 95
           +G YKS S+  TL+SLDWL++T  TL+  PRT RFFL+K F DY LWV+KT NRK  LAE
Sbjct: 1   MGPYKSFSIIATLESLDWLKTTFNTLLKMPRTTRFFLKKGFGDYCLWVQKTHNRKGYLAE 60

Query: 96  VFRV---GRKCC-LIPEGADK 113
            FRV   GRKCC L+ EG DK
Sbjct: 61  FFRVDDKGRKCCILVIEGRDK 81

[Close]
BLAST of Bhi12G002251 vs. NCBI nr
Match: ADN33672.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 116.7 bits (291), Expect = 7.1e-23
Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 0 

Query: 1   MGFMSQLPRSCFIERKEFTLSLDKFSGSTMLLVTEVGHYKSLSLSLTLDSLDWLRSTLKT 60
           M  + QLPRSC IE+K+F LSLD  S    +L+TEVG YKS S+++TL+SL+WL+ST KT
Sbjct: 39  MSSLRQLPRSCTIEKKDFVLSLDNRSRDLKMLITEVGPYKSFSIAVTLESLEWLKSTFKT 98

Query: 61  LIATPRTNRFFLEKRFPDYWLWVEKTQNRKRKLAEVFR 99
           L+ TP T RFFL+KRF +Y LWV+KT NRK +   + R
Sbjct: 99  LLDTPLTTRFFLKKRFEEYCLWVQKTYNRKGRTVVLTR 136

[Close]
BLAST of Bhi12G002251 vs. NCBI nr
Match: KGN51135.1 (hypothetical protein Csa_5G465580 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 7.6e-17
Identity = 50/81 (61.73%), Postives = 59/81 (72.84%), Query Frame = 0 

Query: 36  VGHYKSLSLSLTLDSLDWLRSTLKTLIATPRTNRFFLEKRFPDYWLWVEKTQNRKRKLAE 95
           +G YKS S+  TL+SLDWL++T  TL+  PRT RFFL+K F DY LWV+KT NRK  LAE
Sbjct: 1   MGPYKSFSIIATLESLDWLKTTFNTLLKMPRTTRFFLKKGFGDYCLWVQKTHNRKGYLAE 60

Query: 96  VFRV---GRKCC-LIPEGADK 113
            FRV   GRKCC L+ EG DK
Sbjct: 61  FFRVDDKGRKCCILVIEGRDK 81

The following BLAST results are available for this feature:
BLAST of Bhi12G002251 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G002251 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G002251 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|E5GB30|E5GB30_CUCME4.7e-2357.14Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A0A0KNC5|A0A0A0KNC5_CUCSA5.0e-1761.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G465580 PE=4 SV=1[more]
BLAST of Bhi12G002251 vs. NCBI nr
Match NameE-valueIdentityDescription
ADN33672.17.1e-2357.14hypothetical protein [Cucumis melo subsp. melo][more]
KGN51135.17.6e-1761.73hypothetical protein Csa_5G465580 [Cucumis sativus][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M002251Bhi12M002251mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G002251Wax gourdwgowgoB029
Bhi12G002251Cucumber (Gy14) v1cgywgoB506
Bhi12G002251Cucumber (Gy14) v1cgywgoB724
Bhi12G002251Cucumber (Gy14) v2cgybwgoB247
Bhi12G002251Cucumber (Gy14) v2cgybwgoB521
Bhi12G002251Cucurbita maxima (Rimu)cmawgoB0307
Bhi12G002251Cucurbita maxima (Rimu)cmawgoB0465
Bhi12G002251Cucurbita maxima (Rimu)cmawgoB1004
Bhi12G002251Cucurbita maxima (Rimu)cmawgoB1093
Bhi12G002251Cucurbita moschata (Rifu)cmowgoB0294
Bhi12G002251Cucurbita moschata (Rifu)cmowgoB0463
Bhi12G002251Cucurbita moschata (Rifu)cmowgoB1001
Bhi12G002251Cucurbita moschata (Rifu)cmowgoB1087
Bhi12G002251Cucurbita pepo (Zucchini)cpewgoB0182
Bhi12G002251Cucurbita pepo (Zucchini)cpewgoB0391
Bhi12G002251Cucurbita pepo (Zucchini)cpewgoB0759
Bhi12G002251Cucurbita pepo (Zucchini)cpewgoB1097
Bhi12G002251Wild cucumber (PI 183967)cpiwgoB260
Bhi12G002251Wild cucumber (PI 183967)cpiwgoB548
Bhi12G002251Cucumber (Chinese Long) v3cucwgoB263
Bhi12G002251Cucumber (Chinese Long) v3cucwgoB561
Bhi12G002251Cucumber (Chinese Long) v2cuwgoB259
Bhi12G002251Cucumber (Chinese Long) v2cuwgoB544
Bhi12G002251Bottle gourd (USVL1VR-Ls)lsiwgoB013
Bhi12G002251Bottle gourd (USVL1VR-Ls)lsiwgoB417
Bhi12G002251Melon (DHL92) v3.6.1medwgoB096
Bhi12G002251Melon (DHL92) v3.6.1medwgoB524
Bhi12G002251Melon (DHL92) v3.5.1mewgoB095
Bhi12G002251Melon (DHL92) v3.5.1mewgoB522
Bhi12G002251Watermelon (Charleston Gray)wcgwgoB416
Bhi12G002251Watermelon (Charleston Gray)wcgwgoB502
Bhi12G002251Watermelon (97103) v2wgowmbB080
Bhi12G002251Watermelon (97103) v2wgowmbB098
Bhi12G002251Watermelon (97103) v1wgowmB070
Bhi12G002251Watermelon (97103) v1wgowmB107
Bhi12G002251Silver-seed gourdcarwgoB0279
Bhi12G002251Silver-seed gourdcarwgoB0736
Bhi12G002251Silver-seed gourdcarwgoB1113
Bhi12G002251Silver-seed gourdcarwgoB1266