Bhi12G002243 (gene) Wax gourd

Overview
NameBhi12G002243
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr12 : 79284530 .. 79284682 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAATTCATTCAACAAGATCCATTCGGATCTGACCGTGATGAATTGGATTGGTCTGACCTCGTCGCTCGGATGTCAGACTCCCGCCGCCGACAGATGTCCCATGCCACGTTTCGTGAACTGCTATGCCCGAAAATGAATGAATTGTGA

mRNA sequence

ATGGATCAATTCATTCAACAAGATCCATTCGGATCTGACCGTGATGAATTGGATTGGTCTGACCTCGTCGCTCGGATGTCAGACTCCCGCCGCCGACAGATGTCCCATGCCACGTTTCGTGAACTGCTATGCCCGAAAATGAATGAATTGTGA

Coding sequence (CDS)

ATGGATCAATTCATTCAACAAGATCCATTCGGATCTGACCGTGATGAATTGGATTGGTCTGACCTCGTCGCTCGGATGTCAGACTCCCGCCGCCGACAGATGTCCCATGCCACGTTTCGTGAACTGCTATGCCCGAAAATGAATGAATTGTGA

Protein sequence

MDQFIQQDPFGSDRDELDWSDLVARMSDSRRRQMSHATFRELLCPKMNEL
Homology
[Close]
BLAST of Bhi12G002243 vs. TrEMBL
Match: tr|A0A2K1XJN3|A0A2K1XJN3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G077400v3 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.5e-10
Identity = 36/48 (75.00%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 1  MDQFIQQDPFGSDRDELDWSDLVARMSDSRRRQMSHATFRELLCPKMN 49
          MDQFIQQDPFGSD+DE D SDL     DSR RQMSHATFRE LCP++N
Sbjct: 1  MDQFIQQDPFGSDQDEWDESDLSLGCDDSRCRQMSHATFREQLCPRIN 48

[Close]
BLAST of Bhi12G002243 vs. NCBI nr
Match: PNT00988.1 (hypothetical protein POPTR_015G077400v3 [Populus trichocarpa])

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-10
Identity = 36/48 (75.00%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 1  MDQFIQQDPFGSDRDELDWSDLVARMSDSRRRQMSHATFRELLCPKMN 49
          MDQFIQQDPFGSD+DE D SDL     DSR RQMSHATFRE LCP++N
Sbjct: 1  MDQFIQQDPFGSDQDEWDESDLSLGCDDSRCRQMSHATFREQLCPRIN 48

The following BLAST results are available for this feature:
BLAST of Bhi12G002243 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G002243 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G002243 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2K1XJN3|A0A2K1XJN3_POPTR1.5e-1075.00Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_015G077400v3 PE=... [more]
BLAST of Bhi12G002243 vs. NCBI nr
Match NameE-valueIdentityDescription
PNT00988.12.2e-1075.00hypothetical protein POPTR_015G077400v3 [Populus trichocarpa][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M002243Bhi12M002243mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G002243Wax gourdwgowgoB029
Bhi12G002243Cucumber (Gy14) v1cgywgoB506
Bhi12G002243Cucumber (Gy14) v1cgywgoB724
Bhi12G002243Cucumber (Gy14) v2cgybwgoB247
Bhi12G002243Cucumber (Gy14) v2cgybwgoB521
Bhi12G002243Cucurbita maxima (Rimu)cmawgoB0307
Bhi12G002243Cucurbita maxima (Rimu)cmawgoB0465
Bhi12G002243Cucurbita maxima (Rimu)cmawgoB1004
Bhi12G002243Cucurbita maxima (Rimu)cmawgoB1093
Bhi12G002243Cucurbita moschata (Rifu)cmowgoB0294
Bhi12G002243Cucurbita moschata (Rifu)cmowgoB0463
Bhi12G002243Cucurbita moschata (Rifu)cmowgoB1001
Bhi12G002243Cucurbita moschata (Rifu)cmowgoB1087
Bhi12G002243Cucurbita pepo (Zucchini)cpewgoB0182
Bhi12G002243Cucurbita pepo (Zucchini)cpewgoB0391
Bhi12G002243Cucurbita pepo (Zucchini)cpewgoB0759
Bhi12G002243Cucurbita pepo (Zucchini)cpewgoB1097
Bhi12G002243Wild cucumber (PI 183967)cpiwgoB260
Bhi12G002243Wild cucumber (PI 183967)cpiwgoB548
Bhi12G002243Cucumber (Chinese Long) v3cucwgoB263
Bhi12G002243Cucumber (Chinese Long) v3cucwgoB561
Bhi12G002243Cucumber (Chinese Long) v2cuwgoB259
Bhi12G002243Cucumber (Chinese Long) v2cuwgoB544
Bhi12G002243Bottle gourd (USVL1VR-Ls)lsiwgoB013
Bhi12G002243Bottle gourd (USVL1VR-Ls)lsiwgoB417
Bhi12G002243Melon (DHL92) v3.6.1medwgoB096
Bhi12G002243Melon (DHL92) v3.6.1medwgoB524
Bhi12G002243Melon (DHL92) v3.5.1mewgoB095
Bhi12G002243Melon (DHL92) v3.5.1mewgoB522
Bhi12G002243Watermelon (Charleston Gray)wcgwgoB416
Bhi12G002243Watermelon (Charleston Gray)wcgwgoB502
Bhi12G002243Watermelon (97103) v2wgowmbB080
Bhi12G002243Watermelon (97103) v2wgowmbB098
Bhi12G002243Watermelon (97103) v1wgowmB070
Bhi12G002243Watermelon (97103) v1wgowmB107
Bhi12G002243Silver-seed gourdcarwgoB0279
Bhi12G002243Silver-seed gourdcarwgoB0736
Bhi12G002243Silver-seed gourdcarwgoB1113
Bhi12G002243Silver-seed gourdcarwgoB1266