Bhi12G001997 (gene) Wax gourd

NameBhi12G001997
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr12 : 71167038 .. 71167860 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAGGAGCACTTAAAAGACGCTAAATCCAAAGAGATTATAAAGCGTCATCAAAGACAAGAAAAAAGTGACATAAAAAGAAAATGGCCAAGAAGATGATTGCAGTGTTTTTTATGTGCATTGTGGTGATGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGACAAATATGAGGCTAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAATGGCAGTGGTCAAACCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAAAAGCTGGTACAACTTTCTGATCTCTATCTTTCTTCTAACATCCACAATGTCAAATTATTTAAGGCAAATTACAAAATCTATTCTTGAAATATGGTGTTTTTTGCGAATTTAAACACTTACATATTTTTGAAAATCTTGTTTCTAATAGAGTATAATTTTATTTTCTCATATTAATTTAAATTGTTGTGTATTTATGTTTACAGATAAGCTACACATCGAATTACATTGAATAATGAGAAACTAAAGGAAAGAAGAAGCTCTTGAGGAGGATCAAGTAGTAATATGTATTACTTTATTAAAATCAAGCTTGTGAAAGGGAGTTTGATAAGCCTCCTTTCAATATAAATTTTATTATATGATTTGAAAATTTCAGTTCATGAAGTTCCTCTATTGGTGTCATTCGTGAATTTTTTAAAGTAATGTAATTTTAGAAAAAAAAACATACACAAAAATAGGGTCATTTTTCCCAACTATTTCTAACAATAATTCTAAAAATAGGGTGTGTAAATAATCTACATAGCATC

mRNA sequence

AAAAGGAGCACTTAAAAGACGCTAAATCCAAAGAGATTATAAAGCGTCATCAAAGACAAGAAAAAAGTGACATAAAAAGAAAATGGCCAAGAAGATGATTGCAGTGTTTTTTATGTGCATTGTGGTGATGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGACAAATATGAGGCTAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAATGGCAGTGGTCAAACCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAAAAGCTGATAAGCTACACATCGAATTACATTGAATAATGAGAAACTAAAGGAAAGAAGAAGCTCTTGAGGAGGATCAAGTAGTAATATGTATTACTTTATTAAAATCAAGCTTGTGAAAGGGAGTTTGATAAGCCTCCTTTCAATATAAATTTTATTATATGATTTGAAAATTTCAGTTCATGAAGTTCCTCTATTGGTGTCATTCGTGAATTTTTTAAAGTAATGTAATTTTAGAAAAAAAAACATACACAAAAATAGGGTCATTTTTCCCAACTATTTCTAACAATAATTCTAAAAATAGGGTGTGTAAATAATCTACATAGCATC

Coding sequence (CDS)

ATGGCCAAGAAGATGATTGCAGTGTTTTTTATGTGCATTGTGGTGATGGCTGCTTTGCAATTTGCCACTGCCAATGAAGAGGTGGACAAATATGAGGCTAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAATGGCAGTGGTCAAACCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAAAAGCTGATAAGCTACACATCGAATTACATTGA

Protein sequence

MAKKMIAVFFMCIVVMAALQFATANEEVDKYEAKFDAKYKSCYETCEKECLENGSGQTFCEVKCDEDCDEKEKADKLHIELH
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015333Pollen_allergen_ole-e-6
IPR036466Pollen_allergen_ole-e-6_sf

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001997Bhi12M001997mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3DG3DSA:1.10.287.720coord: 35..80
e-value: 7.4E-17
score: 62.6
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILYSSF111388Pollen allergen ole e 6coord: 36..77
IPR015333Pollen allergen ole e 6PFAMPF09253Ole-e-6coord: 42..78
e-value: 7.2E-13
score: 48.2
IPR015333Pollen allergen ole e 6PANTHERPTHR35632FAMILY NOT NAMEDcoord: 1..78

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None