Bhi12G001976 (gene) Wax gourd

Overview
NameBhi12G001976
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPolynucleotidyl transferase, ribonuclease H-like superfamily protein
Locationchr12 : 70341505 .. 70346886 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCCATAAATTAATTTTGAATCGTATCCAAAATTAAATTTATATTATAAAGTTTAATTAAATATAAACTTTATATCATAATGTATCATTATACATTATATTATTTCCCTAAGTGAATTTGAACATTTCAAATTCTATTCAAGACATAATTATCCCAATTCTCTTTACAAGCTAGGAATGAACCTTGTAGACCTACAGATCAGAAACTCAAACGATATGAGATTAATTAGCTAAACTCATAAACCACATTGATTAATATTCGTTAACTGTGGGTACACTCCACTAAAGACCGACAGTTGGACTCTTCTCATTACGGATATATTTCTATGTCCAATAGACCAATAATAGCAAGTTAGTCTTTCACGAGTGTTCATAACATCAGTTGGGTCAAATTACTATTTTACCCTTGGGTTACCTCTGTATTCTTAAGTATCAGTGCTTCTCTAATGAACAACTTATTTATGGTCCAACTATTAAACATAAAATTCCTCTCAGACCAGTGAGAGGATAAGGCCCTTTGTTCAAGTCTCGGAGATACTACTTAAGGGAACACTCGTCTACTTATCCTACAGTCGGGAATGAGTGAAATCCATCTCGTATTATTATGTTCTCAGCTCACCGCTTGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTTGGCAAACTGGCCACTCTTACTCGTGCAAATCAAAGGACAATCCCTCTTGAATAGGAGTTCATAATAGACTCAGGATTAAGATTAAGTTGCCTAGTTCATCCTATTGAAATAGAAACCTCACTGGTCAACGGTATTACATTTGTTGGTTACTATTTCGCGGTCTGATCTTAAACTCATTGCATAGGATACTCCACTTGCATGTCACCTACACGAACGTGTTCGATCATTGCATTTGTATCAAATACAAAATAGGTCATATCCGTAGTATCACCAAGATAAGGTACCCAGCCTTATCTTAATACAATAAACTCTTTAGATTGTATCTTGAACATAGATCCATGTATGTGTCTCCACATACACTTCAAGACTCATAAGATAACCTAGGATGTTAGTTTATCATATTTGAGGTTATTAAAACAAAATGACTATAACACAATCGATAACATTTATTGAAATAACATCGATAACTTTATATTGATGACAATCAGTTACTTACATCTACTATCTACAAGTTTTAGGGTATAAAACCCAACATGCTTGCTCATTCTTCTTCCTCTTAATTACGTTACCTTAAACCTCGTTTGAAATTTAAATGTTAGTCAACTCATATAGAAGTATAAATGTTCTTTTCCTTTGATAATCTTAAAACTCGTCCGGTAATTGTTTCATTTTTACTTCTAAAAACCGTGCTTGTTTCTACAATTTTTTTCAATAATTTTCATCTTTGGAAATATTTGAAATCATAATAACCAAATTCTCAAAAACAAAATTCACCTTGATAGTTTTCAAAACTAAACTTGATTTTCAAAAATTAAATAAAATCAATGGTGATTGGACAGACCTTTAGTTAATCACATTTTCATACTTACAATGATTGATATAGATTACAATGGCTCTCCTTACAACTGGTATGGCAATAGAAATGGATCTATGATTTAGAAAAGAATTGATAGATTCTTATGTAATAATACATTTTGGGATCTATTTAATCAAATCAATGTACAACATTTGGATTGGCTCTTCTCTGATCATAGACCTATTGGGATCAATTTAGAAACACAAACTAAAAGCAATTAAAGAGAAAAAAGCATTCATGTTTGAGGAAGTTTGGACCCAAAGTGAAGACTATAAACAAGTAGTTGAGAACTCTAGTTTATGGAAGGAACCCTCCTTCAAGGTTTCTTGGTGCAAAGTCTGGATCTTTGTTCAATCTTGTTATCAAAATGGGGCAGTGGTACTCATAAAAAAGTAAACTTTGAGAATTGATGATTGCAAGAGAGCTCTCCATTTAGCCTATGACATTCCATCTACTATTGACTAATTTGATCATATACATCTTATAGAGTTTGAGTTAGATCATTTGTTAGAAGAAAAGAAATCTACTGGCATCAGAGATCTAATGAAAGTTGGATTAAATGGGGTGACAATAATACAAAATGGTTTCATAAAAAAGCTACGATAAGGAGGAAAAGAAATGAAATCCATGGCATTTTAACTGAAGATGGTTCATGGTTTTAAGATAAGAATATTATTCAAAGAACTTTTCTTAACTACTACCAAAAGTTATTCACTTCTTACCCAAATTAAGTTTAGATAAATATTATCCTACAACATATTCATCCTAAAGTTACCATAACAATGAACATTAGTCTCTCAGCTCAGTACACAAAAGATGAGTTTGAAAGCGCTATAAAACAGATGTTCCCTACAAAGTCCCCGGAGCTTGATGGTTTTTCTGCTGTATTTTTTCAATCTTATTGGAATGCGGTTGGCCAAAAAACCATGGAAAGTTGTCTTGATATTTTCAATCAAAATAGTGATATTGACTCTTGGAATTCAAAAAATCTATTACTAATTCCTAAAGTTCGTGAACCCCCAATCTGTTATGATTTAGACCTATTAGCCTTTTCAATGTCATTTATAAAATTGTGACAAAGACTATAGCTGATCATCTCAAATGTGTTTTAAGTGATGCGATTTCTGACTTTCACTCTTCTTTTGTTCCAGGAAGACAAATAATGGACAATATAATGATAGGTCATCAATGTGTTCACTTCATAAAGAGCAAAAAAAGGGAAAATAGGGATTTCAGCTTTAAAACTCGATTTTAGTAAAGCTTATGATAGGGCGAAATGGTCTTTTTTAAAAGCTATTATGATTCACCTTGCTTTTGATAATATTTTTACTTCACTCATATATAACTGTATATCTTCTGCTAGGTTCTCTATCCTCTTAAATGGTGAAGCTTCAAAAATTTTCTTCTCAAGTAGAGGCATTTGTCAGGGGACCCTCTTTCTCTTTACTTATATCTCCTCTTTACCGAAGGCCTTTCATCTTTTTTACTTTCTAATCATTCTTTTGGCTCTCTTTCAGGTCTTACTATCAAACTCTCAAGTCCTGTTATCCCTTTCTTGTTATTTATTAATGATAGTCTAATTTTCTGCAAAGCCTCGGAGCAAGAATTTTTAACCTTAAAGTATAATTTTTTAGAAGTTTGAAGATGCTTCATGAGCTAAAATTAATTTTGATAAATCAACATTGCTTTTTTCGCCAAATATAAACCAAGATAGAGGCATCTTCCTTAGTTCTATCTTTGGGGTTCAAAAAGTTGAAGACTGTTAGGAACCTTCATAACAAGAACGGTACTAAAAGATATAGAAAAACTAAAGGACAATTCAATTATAGAAATATAGTAAAAATATATTGAAATATGCTATAAACTCACAAACTAACAAGATAAACCCTAGCCTTTCGAGAGGGCTAGTCTCTCCCAAATTCCCAAATGAAAATTCCCACCAAATTCTTCACACCCTCCTACCACTCCCACTCCTATTTATAGTCATATTCACTAACTAACTTCCTATCTAATTACTCTTATACCCTTACTAATACCAATACCAATATTCTCCTAAAAGTCCTACTATTTCTATACTAGGGACCTTACAAAGACCTAGGCCATTATCTTGGTCTTACTTCATCTCTTTCTAGAAGTAAGTGTAAGGATTTTAGTTTCATTGTAGACAGAGTATGGAAAGCACTGCAAGGTTGGAAGGCATCTTTATTTTCTATTGGTGGCAAGGAAGTATTAATAAAGAGCATAAGCCAAGTGATACCAACTTATGGAATGAGCTTGTTCAAACTCCCTAAGCAATTTCATTCAAAAATTACCATAAACTTTTCTCGCTTTTAGTGGGGTTCTTCAACTAGTAAAAGGAAAATTCACTGGATCAAATGGGCTGACTTATGTCTTCCTAAAGCCTGAGAGGCTTTAATTTCCGAGATCTTGAGGGCTTTAACAGATCTTTAATTGCAAAACAAGTGTGGAGGCTCGTTATTAATCAAAATTTTCTTGTTTCTGAACTTCTTAAGAGGATCTACTTTAAGGATTGTTGTATTAAAAAAGTTGTTAGAAGGAAAGCTTCTTATCTTTGATCCAATTTAATGTGGGGTTGTTCTTTTCTAAAGAAAGGTATCCATTATAAGATTGCTGATGGAAAATCTACAAAAATATTCTCTGACTCCTGGATTCCCAAAGAATCCATCTTCAGACCAATTTGTATTGACAATTAGTATAGAGATTATAAGGTGGCTGATTTTATACATGAGAATGGATCTTGGAATCTTGAACTTCTAAACCGAGCAACAACTAAAGAGGATGCAAATCTAATTAAAAGAATTCTAACAGACTTAAATATCAATGACAGATTTATATGGCACTATGACAAATATGGCTTTTACACGGTGAAGTCAGGGTATGACTGGTTTCAATAGTCACGATTATTCTTATGTTCTTCTGGTAGTAACAAAATGGAAATTGTGTGGAAGGAGGTGTGGAAGCTTAGAATTCCTTCTAAAATCAAGCATTTTATATGGATGGCCCTTAAAAATATTATCCCCACCAGAATAAACTTATTAAAAAAATGATTAAATATGTACCTGTTTGCCCGATTTATACATTGTCTATGGTAACTACTGATCACATTCTCTTCACTTGTTCAAGAGTTAAGGAGATTTGGCTTCGATCATTGAATTTTCTTCTTATTTCTGATGACTTCAATGGAAGCTTTATTGATCTTGTGCCCTGGTTGATGCTTGCTCACTGGAAAAGCTGGAATTAATAGTCATTCTGTGTTGGTCTCTTTGGAATGACCGAAATTTTTTCATCAATAACAAAAGGATTGTCCCGTCTGATATAAAAATTAAATGGGATCTCAACTACCATAAGGAAATCATGGGTGGTTTTTGCACAAAGTTAATCATCCTAATAATTTCATCAAATTAACCCCAACAAGTAGGATGCATTGGTCACCTCCTCCTCCTGATGCGGCTTGGATTTCTCCCATTGCCTTAACGGGTCTCTCGACTGTTTTTCGAAATTCAAATGGTGACATTATAGAGCTGTCTGCTATCCATCTTGATGTTCGTTATGGAACCCCGTTTGCTGAGATCTTAACAGTCCTTGAAGGCTTGAAATTGGCTGCTTCATTGCAAATTTTCCACATGCAGGTTCAATCTGATTGTCTTCAAACTATTGCTCTACTGAATGAAACTGTCTCTGCTCTAAGTGAAATTGATTGCGGGACTGAAGCAATAAAATCATCTGCCACGTTCTTCCACAACATTTCTTTTAGAGAATGTAATAGGGTTGCAGATTCTTTAGCTAAAGCTGCTAGGGATTTGTTGTTTGTTGGTGTTTAGGTGGAAAATTTCCCAACCCATTTCCT

mRNA sequence

CCCCCATAAATTAATTTTGAATCGTATCCAAAATTAAATTTATATTATAAAGTTTAATTAAATATAAACTTTATATCATAATGTATCATTATACATTATATTATTTCCCTAAGTGAATTTGAACATTTCAAATTCTATTCAAGACATAATTATCCCAATTCTCTTTACAAGCTAGGAATGAACCTTGTAGACCTACAGATCAGAAACTCAAACGATATGAGATTAATTAGCTAAACTCATAAACCACATTGATTAATATTCGTTAACTGTGGGTACACTCCACTAAAGACCGACAGTTGGACTCTTCTCATTACGGATATATTTCTATGTCCAATAGACCAATAATAGCAAGTTAGTCTTTCACGAGTGTTCATAACATCAGTTGGGTCAAATTACTATTTTACCCTTGGGTTACCTCTGTATTCTTAAGTATCAGTGCTTCTCTAATGAACAACTTATTTATGGTCCAACTATTAAACATAAAATTCCTCTCAGACCAGTGAGAGGATAAGGCCCTTTGTTCAAGTCTCGGAGATACTACTTAAGGGAACACTCGTCTACTTATCCTACAGTCGGGAATGAGTGAAATCCATCTCGTATTATTATGTTCTCAGCTCACCGCTTGGTCTTGTCCCCAAAATGGTAGGCTTATTGAGTTGGCAAACTGGCCACTCTTACTCGTGCAAATCAAAGGACAATCCCTCTTGAATAGGAGTTCATAATAGACTCAGGATTAAGATTAAGTTGCCTAGTTCATCCTATTGAAATAGAAACCTCACTGGTCAACGGTATTACATTTGTTGGTTACTATTTCGCGGTCTGATCTTAAACTCATTGCATAGGATACTCCACTTGCATGTCACCTACACGAACGTGTTCGATCATTGCATTTGTATCAAATACAAAATAGGTCATATCCGTAGTATCACCAAGATAAGGTACCCAGCCTTATCTTAATACAATAAACTCTTTAGATTGTATCTTGAACATAGATCCATGTATGTGTCTCCACATACACTTCAAGACTCATAAGATAACCTAGGATGTTAGTTTATCATATTTGAGGTTATTAAAACAAAATGACTATAACACAATCGATAACATTTATTGAAATAACATCGATAACTTTATATTGATGACAATCAGTTACTTACATCTACTATCTACAAGTTTTAGGGTATAAAACCCAACATGCTTGCTCATTCTTCTTCCTCTTAATTACGTTACCTTAAACCTCGTTTGAAATTTAAATGTTAGTCAACTCATATAGAAGTATAAATGTTCTTTTCCTTTGATAATCTTAAAACTCGTCCGGTAATTGTTTCATTTTTACTTCTAAAAACCGTGCTTGTTTCTACAATTTTTTTCAATAATTTTCATCTTTGGAAATATTTGAAATCATAATAACCAAATTCTCAAAAACAAAATTCACCTTGATAGTTTTCAAAACTAAACTTGATTTTCAAAAATTAAATAAAATCAATGGTGATTGGACAGACCTTTAGTTAATCACATTTTCATACTTACAATGATTGATATAGATTACAATGGCTCTCCTTACAACTGGTATGGCAATAGAAATGGATCTATGATTTAGAAAAGAATTGATAGATTCTTATGTAATAATACATTTTGGGATCTATTTAATCAAATCAATGTACAACATTTGGATTGGCTCTTCTCTGATCATAGACCTATTGGGATCAATTTAGAAACACAAACTAAAAGCAATTAAAGAGAAAAAAGCATTCATGTTTGAGGAAGTTTGGACCCAAAGTGAAGACTATAAACAAGTAGTTGAGAACTCTAGTTTATGGAAGGAACCCTCCTTCAAGGTTTCTTGGTGCAAAGTCTGGATCTTTGTTCAATCTTGTTATCAAAATGGGGCAGTGGTACTCATAAAAAAGTAAACTTTGAGAATTGATGATTGCAAGAGAGCTCTCCATTTAGCCTATGACATTCCATCTACTATTGACTAATTTGATCATATACATCTTATAGAGTTTGAGTTAGATCATTTGTTAGAAGAAAAGAAATCTACTGGCATCAGAGATCTAATGAAAGTTGGATTAAATGGGGTGACAATAATACAAAATGGTTTCATAAAAAAGCTACGATAAGGAGGAAAAGAAATGAAATCCATGGCATTTTAACTGAAGATGGTTCATGGTTTTAAGATAAGAATATTATTCAAAGAACTTTTCTTAACTACTACCAAAAGTTATTCACTTCTTACCCAAATTAAGTTTAGATAAATATTATCCTACAACATATTCATCCTAAAGTTACCATAACAATGAACATTAGTCTCTCAGCTCAGTACACAAAAGATGAGTTTGAAAGCGCTATAAAACAGATGTTCCCTACAAAGTCCCCGGAGCTTGATGGTTTTTCTGCTGTATTTTTTCAATCTTATTGGAATGCGGTTGGCCAAAAAACCATGGAAAGTTGTCTTGATATTTTCAATCAAAATAGTGATATTGACTCTTGGAATTCAAAAAATCTATTACTAATTCCTAAAGTTCGTGAACCCCCAATCTGTTATGATTTAGACCTATTAGCCTTTTCAATGTCATTTATAAAATTGTGACAAAGACTATAGCTGATCATCTCAAATGTGTTTTAAGTGATGCGATTTCTGACTTTCACTCTTCTTTTGTTCCAGGAAGACAAATAATGGACAATATAATGATAGGTCATCAATGTGTTCACTTCATAAAGAGCAAAAAAAGGGAAAATAGGGATTTCAGCTTTAAAACTCGATTTTAGTAAAGCTTATGATAGGGCGAAATGGTCTTTTTTAAAAGCTATTATGATTCACCTTGCTTTTGATAATATTTTTACTTCACTCATATATAACTGTATATCTTCTGCTAGGTTCTCTATCCTCTTAAATGGTGAAGCTTCAAAAATTTTCTTCTCAAGTAGAGGCATTTGTCAGGGGACCCTCTTTCTCTTTACTTATATCTCCTCTTTACCGAAGGCCTTTCATCTTTTTTACTTTCTAATCATTCTTTTGGCTCTCTTTCAGGTCTTACTATCAAACTCTCAAGTCCTGTTATCCCTTTCTTGTTATTTATTAATGATAGTCTAATTTTCTGCAAAGCCTCGGAGCAAGAATTTTTAACCTTAAAGTATAATTTTTTAGAAGTTTGAAGATGCTTCATGAGCTAAAATTAATTTTGATAAATCAACATTGCTTTTTTCGCCAAATATAAACCAAGATAGAGGCATCTTCCTTAGTTCTATCTTTGGGGTTCAAAAAGTTGAAGACTGTTAGGAACCTTCATAACAAGAACGGTACTAAAAGATATAGAAAAACTAAAGGACAATTCAATTATAGAAATATAGTAAAAATATATTGAAATATGCTATAAACTCACAAACTAACAAGATAAACCCTAGCCTTTCGAGAGGGCTAGTCTCTCCCAAATTCCCAAATGAAAATTCCCACCAAATTCTTCACACCCTCCTACCACTCCCACTCCTATTTATAGTCATATTCACTAACTAACTTCCTATCTAATTACTCTTATACCCTTACTAATACCAATACCAATATTCTCCTAAAAGTCCTACTATTTCTATACTAGGGACCTTACAAAGACCTAGGCCATTATCTTGGTCTTACTTCATCTCTTTCTAGAAGTAAGTGTAAGGATTTTAGTTTCATTGTAGACAGAGTATGGAAAGCACTGCAAGGTTGGAAGGCATCTTTATTTTCTATTGGTGGCAAGGAAGTATTAATAAAGAGCATAAGCCAAGTGATACCAACTTATGGAATGAGCTTGTTCAAACTCCCTAAGCAATTTCATTCAAAAATTACCATAAACTTTTCTCGCTTTTAGTGGGGTTCTTCAACTAGTAAAAGGAAAATTCACTGGATCAAATGGGCTGACTTATGTCTTCCTAAAGCCTGAGAGGCTTTAATTTCCGAGATCTTGAGGGCTTTAACAGATCTTTAATTGCAAAACAAGTGTGGAGGCTCGTTATTAATCAAAATTTTCTTGTTTCTGAACTTCTTAAGAGGATCTACTTTAAGGATTGTTGTATTAAAAAAGTTGTTAGAAGGAAAGCTTCTTATCTTTGATCCAATTTAATGTGGGGTTGTTCTTTTCTAAAGAAAGGTATCCATTATAAGATTGCTGATGGAAAATCTACAAAAATATTCTCTGACTCCTGGATTCCCAAAGAATCCATCTTCAGACCAATTTGTATTGACAATTAGTATAGAGATTATAAGGTGGCTGATTTTATACATGAGAATGGATCTTGGAATCTTGAACTTCTAAACCGAGCAACAACTAAAGAGGATGCAAATCTAATTAAAAGAATTCTAACAGACTTAAATATCAATGACAGATTTATATGGCACTATGACAAATATGGCTTTTACACGGTGAAGTCAGGGTATGACTGGTTTCAATAGTCACGATTATTCTTATGTTCTTCTGGTAGTAACAAAATGGAAATTGTGTGGAAGGAGGTGTGGAAGCTTAGAATTCCTTCTAAAATCAAGCATTTTATATGGATGGCCCTTAAAAATATTATCCCCACCAGAATAAACTTATTAAAAAAATGATTAAATATGTACCTGTTTGCCCGATTTATACATTGTCTATGGTAACTACTGATCACATTCTCTTCACTTGTTCAAGAGTTAAGGAGATTTGGCTTCGATCATTGAATTTTCTTCTTATTTCTGATGACTTCAATGGAAGCTTTATTGATCTTGTGCCCTGGTTGATGCTTGCTCACTGGAAAAGCTGGAATTAATAGTCATTCTGTGTTGGTCTCTTTGGAATGACCGAAATTTTTTCATCAATAACAAAAGGATTGTCCCGTCTGATATAAAAATTAAATGGGATCTCAACTACCATAAGGAAATCATGGGTGGTTTTTGCACAAAGTTAATCATCCTAATAATTTCATCAAATTAACCCCAACAAGTAGGATGCATTGGTCACCTCCTCCTCCTGATGCGGCTTGGATTTCTCCCATTGCCTTAACGGGTCTCTCGACTGTTTTTCGAAATTCAAATGGTGACATTATAGAGCTGTCTGCTATCCATCTTGATGTTCGTTATGGAACCCCGTTTGCTGAGATCTTAACAGTCCTTGAAGGCTTGAAATTGGCTGCTTCATTGCAAATTTTCCACATGCAGGTTCAATCTGATTGTCTTCAAACTATTGCTCTACTGAATGAAACTGTCTCTGCTCTAAGTGAAATTGATTGCGGGACTGAAGCAATAAAATCATCTGCCACGTTCTTCCACAACATTTCTTTTAGAGAATGTAATAGGGTTGCAGATTCTTTAGCTAAAGCTGCTAGGGATTTGTTGTTTGTTGGTGTTTAGGTGGAAAATTTCCCAACCCATTTCCT

Coding sequence (CDS)

ATGCATTGGTCACCTCCTCCTCCTGATGCGGCTTGGATTTCTCCCATTGCCTTAACGGGTCTCTCGACTGTTTTTCGAAATTCAAATGGTGACATTATAGAGCTGTCTGCTATCCATCTTGATGTTCGTTATGGAACCCCGTTTGCTGAGATCTTAACAGTCCTTGAAGGCTTGAAATTGGCTGCTTCATTGCAAATTTTCCACATGCAGGTTCAATCTGATTGTCTTCAAACTATTGCTCTACTGAATGAAACTGTCTCTGCTCTAAGTGAAATTGATTGCGGGACTGAAGCAATAAAATCATCTGCCACGTTCTTCCACAACATTTCTTTTAGAGAATGTAATAGGGTTGCAGATTCTTTAGCTAAAGCTGCTAGGGATTTGTTGTTTGTTGGTGTTTAG

Protein sequence

MHWSPPPPDAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVLEGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNISFRECNRVADSLAKAARDLLFVGV
Homology
[Close]
BLAST of Bhi12G001976 vs. TrEMBL
Match: tr|A0A1R3H2R0|A0A1R3H2R0_COCAP (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_21633 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.5e-09
Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 0 

Query: 3    WSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVL 62
            W+PP         DAA+++P    GL+ V R+SNG+++   A        + +AEI TV 
Sbjct: 1633 WTPPAEGIAKVNVDAAFVNPQDGAGLAAVARDSNGEVLCSVAAKDRFVKDSLYAEIFTVC 1692

Query: 63   EGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNISF---- 122
             G+ +A      H  ++SDCL  +  LN+      E DC  E I+  A+FF +ISF    
Sbjct: 1693 LGVLMARQEGFNHCVIESDCLMVVLALNKKGRVSWEGDCVLEEIRDLASFFDSISFVHVK 1752

Query: 123  RECNRVADSLAKAA 126
            RE N  A SLAK A
Sbjct: 1753 REANVCAHSLAKHA 1766

[Close]
BLAST of Bhi12G001976 vs. TrEMBL
Match: tr|A0A1S3ZQF0|A0A1S3ZQF0_TOBAC (uncharacterized protein LOC107789334 OS=Nicotiana tabacum OX=4097 GN=LOC107789334 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.8e-05
Identity = 43/125 (34.40%), Postives = 62/125 (49.60%), Query Frame = 0 

Query: 9   DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTP-FAEILTVLEGLKLAASLQIF 68
           D A+ S I  TG    FRNSNGD I     H   +  +P  AE++ +LEGLK+A  +   
Sbjct: 7   DGAFSSNINATGFGGTFRNSNGDWI--VGFHKASQAISPTHAELMALLEGLKIAKEMNFQ 66

Query: 69  HMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNI-------SFRECNRVADS 126
           +M++++DC + I L+ E     S I      +       H +       +FRE N+VA  
Sbjct: 67  NMELETDCTEVIKLIYEDNYYFSNI------VSECRWLMHQLKLPQLKHNFREGNKVAHR 123

[Close]
BLAST of Bhi12G001976 vs. TrEMBL
Match: tr|A0A1R3GIN3|A0A1R3GIN3_COCAP (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_25630 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-05
Identity = 39/127 (30.71%), Postives = 58/127 (45.67%), Query Frame = 0 

Query: 3    WSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVL 62
            W PP P       DAA+       GL  V R+S G ++  +   +     + FAE+  +L
Sbjct: 1466 WRPPSPGTFKLNSDAAYCCRRKEAGLGVVIRDSTGQVLYTAVTRVAWVLDSLFAEVYAIL 1525

Query: 63   EGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNISFRECN 122
             GL +A +  + H+  +SD LQ I  LN    +L E     + IK   + F + SFR   
Sbjct: 1526 FGLLVAKTFGLGHVDAESDSLQAILELNRLTPSLWEGGSLIQQIKDLGSCFDSCSFRHVK 1585

[Close]
BLAST of Bhi12G001976 vs. TrEMBL
Match: tr|A0A2I4FLN6|A0A2I4FLN6_9ROSI (uncharacterized protein LOC109000195 OS=Juglans regia OX=51240 GN=LOC109000195 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04
Identity = 40/134 (29.85%), Postives = 62/134 (46.27%), Query Frame = 0 

Query: 3   WSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVL 62
           W PPPP       D A  + +   G+  V R+  G ++  +    D        E+L VL
Sbjct: 89  WKPPPPGFLKLNVDGAMFADVGKAGIEVVLRDEAGQVVMAATKKEDFVDEPATIELLAVL 148

Query: 63  EGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNIS----F 122
            GL+   SL I ++ V+SDCL  +  L ++  +LS      + +K     F N S    +
Sbjct: 149 RGLQFFLSLGIPNLVVESDCLVVVQELQDSQESLSSNGNLIQDVKRLMQLFRNSSVQHVY 208

Query: 123 RECNRVADSLAKAA 126
           R+ N VA +LA+ A
Sbjct: 209 RDGNGVAHTLARYA 222

[Close]
BLAST of Bhi12G001976 vs. TrEMBL
Match: tr|A0A2I4FBX0|A0A2I4FBX0_9ROSI (uncharacterized protein LOC108997361 OS=Juglans regia OX=51240 GN=LOC108997361 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04
Identity = 42/139 (30.22%), Postives = 70/139 (50.36%), Query Frame = 0 

Query: 1   MHWSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFA-EIL 60
           +HW PPPP       D    S +   G+  + R+S G ++ ++A  L++    P A E+L
Sbjct: 48  LHWKPPPPGVLKLNTDETIFSDLHKDGVGVILRDSAGKVV-IAASKLELEMEEPEAVELL 107

Query: 61  TVLEGLKLAASLQIFHMQVQSDCL---QTIALLNETVSALSEIDCGTEAIKS---SATFF 120
            V  G++L +++ I H++++SDCL   Q++   N   S L  I    + + S   S +F 
Sbjct: 108 VVFRGMQLCSTMGISHIEIESDCLLLVQSLQQNNMLNSMLGNIFTEVQRLSSCFTSCSFT 167

Query: 121 HNISFRECNRVADSLAKAA 126
           H   +RE N  A  L + A
Sbjct: 168 H--VYREGNGAAHQLTRNA 183

[Close]
BLAST of Bhi12G001976 vs. NCBI nr
Match: OMO64624.1 (reverse transcriptase [Corchorus capsularis])

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08
Identity = 49/134 (36.57%), Postives = 69/134 (51.49%), Query Frame = 0 

Query: 3    WSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVL 62
            W+PP         DAA+++P    GL+ V R+SNG+++   A        + +AEI TV 
Sbjct: 1633 WTPPAEGIAKVNVDAAFVNPQDGAGLAAVARDSNGEVLCSVAAKDRFVKDSLYAEIFTVC 1692

Query: 63   EGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNISF---- 122
             G+ +A      H  ++SDCL  +  LN+      E DC  E I+  A+FF +ISF    
Sbjct: 1693 LGVLMARQEGFNHCVIESDCLMVVLALNKKGRVSWEGDCVLEEIRDLASFFDSISFVHVK 1752

Query: 123  RECNRVADSLAKAA 126
            RE N  A SLAK A
Sbjct: 1753 REANVCAHSLAKHA 1766

[Close]
BLAST of Bhi12G001976 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06
Identity = 44/134 (32.84%), Postives = 63/134 (47.01%), Query Frame = 0 

Query: 3    WSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVL 62
            W PPP        DAA+ S     G+  V R+SNG I+        ++     AE   VL
Sbjct: 1234 WLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLKGSASLAEAEAVL 1293

Query: 63   EGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNISF---- 122
             GL+LA +  +  + ++SDCL+ + L+N T  + SEI     AI++    F  +      
Sbjct: 1294 WGLQLARNADVSSLIIESDCLEVVQLVNNTKGSRSEIFWTILAIQNQMKIFQKVVVNHIP 1353

Query: 123  RECNRVADSLAKAA 126
            R CN  A  LAK A
Sbjct: 1354 RHCNACAHYLAKIA 1367

[Close]
BLAST of Bhi12G001976 vs. NCBI nr
Match: XP_006471930.1 (uncharacterized protein LOC102617744 [Citrus sinensis])

HSP 1 Score: 57.8 bits (138), Expect = 3.3e-05
Identity = 45/134 (33.58%), Postives = 58/134 (43.28%), Query Frame = 0 

Query: 3   WSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVL 62
           WSPPP        DAA  S     GL  V R+SNG ++         R    FAE   + 
Sbjct: 136 WSPPPTNVLKLNVDAATNSKDQKVGLGAVLRDSNGRVVAAGIKQASFRKDVSFAEAEAIQ 195

Query: 63  EGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNISF---- 122
            GL++A       + V++DC     L+N T  + SEI      I++    F  I F    
Sbjct: 196 WGLQIAKKAAAASLIVETDCKDVAELVNNTKGSRSEIFWIISEIQTQKREFQRIHFNFVP 255

Query: 123 RECNRVADSLAKAA 126
           R CN  A SLAK A
Sbjct: 256 RFCNAHAHSLAKHA 269

[Close]
BLAST of Bhi12G001976 vs. NCBI nr
Match: XP_016466606.1 (PREDICTED: uncharacterized protein LOC107789334 [Nicotiana tabacum])

HSP 1 Score: 57.0 bits (136), Expect = 5.7e-05
Identity = 43/125 (34.40%), Postives = 62/125 (49.60%), Query Frame = 0 

Query: 9   DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTP-FAEILTVLEGLKLAASLQIF 68
           D A+ S I  TG    FRNSNGD I     H   +  +P  AE++ +LEGLK+A  +   
Sbjct: 7   DGAFSSNINATGFGGTFRNSNGDWI--VGFHKASQAISPTHAELMALLEGLKIAKEMNFQ 66

Query: 69  HMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNI-------SFRECNRVADS 126
           +M++++DC + I L+ E     S I      +       H +       +FRE N+VA  
Sbjct: 67  NMELETDCTEVIKLIYEDNYYFSNI------VSECRWLMHQLKLPQLKHNFREGNKVAHR 123

[Close]
BLAST of Bhi12G001976 vs. NCBI nr
Match: XP_015384077.1 (uncharacterized protein LOC107176301 [Citrus sinensis] >XP_024039330.1 uncharacterized protein LOC112097966 [Citrus clementina])

HSP 1 Score: 56.2 bits (134), Expect = 9.7e-05
Identity = 41/134 (30.60%), Postives = 62/134 (46.27%), Query Frame = 0 

Query: 3   WSPPPP-------DAAWISPIALTGLSTVFRNSNGDIIELSAIHLDVRYGTPFAEILTVL 62
           W PPP        DAA  S   + GL  V R+S  + +    +   ++    +AE   + 
Sbjct: 220 WKPPPKNVFKVNVDAAINSKRQMAGLGAVIRDSENNFVATGIMQTGMKESVSYAEAEAID 279

Query: 63  EGLKLAASLQIFHMQVQSDCLQTIALLNETVSALSEIDCGTEAIKSSATFFHNISF---- 122
            GLKLA    +  + ++SDCL+ + L+N T S  + +    E I++    F N+      
Sbjct: 280 WGLKLARRAALSTLIIESDCLEVVELVNNTKSNKTGLWWIIEEIQNQKRTFCNVIVNHIP 339

Query: 123 RECNRVADSLAKAA 126
           R CN  A SLAK A
Sbjct: 340 RTCNVCAHSLAKFA 353

The following BLAST results are available for this feature:
BLAST of Bhi12G001976 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G001976 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G001976 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1R3H2R0|A0A1R3H2R0_COCAP9.5e-0936.57Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_21633 PE=4 SV... [more]
tr|A0A1S3ZQF0|A0A1S3ZQF0_TOBAC3.8e-0534.40uncharacterized protein LOC107789334 OS=Nicotiana tabacum OX=4097 GN=LOC10778933... [more]
tr|A0A1R3GIN3|A0A1R3GIN3_COCAP6.4e-0530.71Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_25630 PE=4 SV... [more]
tr|A0A2I4FLN6|A0A2I4FLN6_9ROSI1.1e-0429.85uncharacterized protein LOC109000195 OS=Juglans regia OX=51240 GN=LOC109000195 P... [more]
tr|A0A2I4FBX0|A0A2I4FBX0_9ROSI1.1e-0430.22uncharacterized protein LOC108997361 OS=Juglans regia OX=51240 GN=LOC108997361 P... [more]
BLAST of Bhi12G001976 vs. NCBI nr
Match NameE-valueIdentityDescription
OMO64624.11.4e-0836.57reverse transcriptase [Corchorus capsularis][more]
XP_024950112.11.8e-0632.84uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_006471930.13.3e-0533.58uncharacterized protein LOC102617744 [Citrus sinensis][more]
XP_016466606.15.7e-0534.40PREDICTED: uncharacterized protein LOC107789334 [Nicotiana tabacum][more]
XP_015384077.19.7e-0530.60uncharacterized protein LOC107176301 [Citrus sinensis] >XP_024039330.1 uncharact... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001976Bhi12M001976mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13456RVT_3coord: 10..125
e-value: 5.0E-14
score: 52.1
NoneNo IPR availablePANTHERPTHR33033FAMILY NOT NAMEDcoord: 2..127
NoneNo IPR availableCDDcd06222RNase_H_likecoord: 9..123
e-value: 1.75756E-13
score: 61.5612
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 9..127
e-value: 2.2E-6
score: 29.7
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 18..128