Bhi12G001962 (gene) Wax gourd

Overview
NameBhi12G001962
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr12 : 69816031 .. 69816306 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATTCGAGGAAGTATATTGCTCGCCGATTGAGCAAGTCATCGAAGGACCAACAACTCGTGCACGTAAAGCACAACTCTTTTTGTCCAAGCAAGAAAAATCCAAGGCCCACGATGCGAGACAACATGTGGACACTCGCCTGGCCAACGTGGAGCAAAGCTGGGAGGAAGTACAGACGTTGGTCGGCAGGTTGAGTGACGATTACGAAGGCTTAGTCCGAGAGAACACCGAGATCAGTGTGGCTACAAAAGAGATGATTATGGAGCTTGGATGA

mRNA sequence

ATGACATTCGAGGAAGTATATTGCTCGCCGATTGAGCAAGTCATCGAAGGACCAACAACTCGTGCACGTAAAGCACAACTCTTTTTGTCCAAGCAAGAAAAATCCAAGGCCCACGATGCGAGACAACATGTGGACACTCGCCTGGCCAACGTGGAGCAAAGCTGGGAGGAAGTACAGACGTTGGTCGGCAGGTTGAGTGACGATTACGAAGGCTTAGTCCGAGAGAACACCGAGATCAGTGTGGCTACAAAAGAGATGATTATGGAGCTTGGATGA

Coding sequence (CDS)

ATGACATTCGAGGAAGTATATTGCTCGCCGATTGAGCAAGTCATCGAAGGACCAACAACTCGTGCACGTAAAGCACAACTCTTTTTGTCCAAGCAAGAAAAATCCAAGGCCCACGATGCGAGACAACATGTGGACACTCGCCTGGCCAACGTGGAGCAAAGCTGGGAGGAAGTACAGACGTTGGTCGGCAGGTTGAGTGACGATTACGAAGGCTTAGTCCGAGAGAACACCGAGATCAGTGTGGCTACAAAAGAGATGATTATGGAGCTTGGATGA

Protein sequence

MTFEEVYCSPIEQVIEGPTTRARKAQLFLSKQEKSKAHDARQHVDTRLANVEQSWEEVQTLVGRLSDDYEGLVRENTEISVATKEMIMELG
Homology
[Close]
BLAST of Bhi12G001962 vs. TrEMBL
Match: tr|A0A1S3B5C5|A0A1S3B5C5_CUCME (uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.7e-18
Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1  MTFEEVYCSPIEQVIEGPTTRARKAQLFLSKQEKSKAHDARQHVDTRLANVEQSWEEVQT 60
          M+ EE + SP+EQVIEGP TR RK Q   +++ KSK    R+HV+TRL N+EQ  E+VQ 
Sbjct: 1  MSAEEGHTSPVEQVIEGPVTRGRKEQHSSTRRSKSKGPAVREHVNTRLTNLEQGMEDVQL 60

Query: 61 LVGRLSDDYEGLVRENTEISVATKEMIMELG 92
           VGRLSD++E LV+EN EI+   KEMI ++G
Sbjct: 61 AVGRLSDNFEELVQENAEITSVAKEMIEDMG 91

[Close]
BLAST of Bhi12G001962 vs. TrEMBL
Match: tr|A0A1S3BG92|A0A1S3BG92_CUCME (uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-17
Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 0 

Query: 1  MTFEEVYCSPIEQVIEGPTTRARKAQLFLSKQEKSKAHDARQHVDTRLANVEQSWEEVQT 60
          M+ EE + SP+EQVIEGP TR RK Q   +++ KSK    R+HVDTRL N+EQ  E+VQ 
Sbjct: 1  MSAEEGHTSPVEQVIEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQL 60

Query: 61 LVGRLSDDYEGLVRENTEISVATKEMIMELG 92
           VGRLS+++E LV EN EI+   KEMI ++G
Sbjct: 61 AVGRLSENFEELVLENAEITSVAKEMIEDMG 91

[Close]
BLAST of Bhi12G001962 vs. NCBI nr
Match: XP_008442289.1 (PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo])

HSP 1 Score: 98.6 bits (244), Expect = 1.2e-17
Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = 0 

Query: 1  MTFEEVYCSPIEQVIEGPTTRARKAQLFLSKQEKSKAHDARQHVDTRLANVEQSWEEVQT 60
          M+ EE + SP+EQVIEGP TR RK Q   +++ KSK    R+HV+TRL N+EQ  E+VQ 
Sbjct: 1  MSAEEGHTSPVEQVIEGPVTRGRKEQHSSTRRSKSKGPAVREHVNTRLTNLEQGMEDVQL 60

Query: 61 LVGRLSDDYEGLVRENTEISVATKEMIMELG 92
           VGRLSD++E LV+EN EI+   KEMI ++G
Sbjct: 61 AVGRLSDNFEELVQENAEITSVAKEMIEDMG 91

[Close]
BLAST of Bhi12G001962 vs. NCBI nr
Match: XP_008446938.1 (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo])

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-17
Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 0 

Query: 1  MTFEEVYCSPIEQVIEGPTTRARKAQLFLSKQEKSKAHDARQHVDTRLANVEQSWEEVQT 60
          M+ EE + SP+EQVIEGP TR RK Q   +++ KSK    R+HVDTRL N+EQ  E+VQ 
Sbjct: 1  MSAEEGHTSPVEQVIEGPVTRGRKEQHSPTRRSKSKGPAVREHVDTRLTNLEQGMEDVQL 60

Query: 61 LVGRLSDDYEGLVRENTEISVATKEMIMELG 92
           VGRLS+++E LV EN EI+   KEMI ++G
Sbjct: 61 AVGRLSENFEELVLENAEITSVAKEMIEDMG 91

The following BLAST results are available for this feature:
BLAST of Bhi12G001962 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G001962 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G001962 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B5C5|A0A1S3B5C5_CUCME7.7e-1854.95uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=... [more]
tr|A0A1S3BG92|A0A1S3BG92_CUCME1.7e-1754.95uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=... [more]
BLAST of Bhi12G001962 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008442289.11.2e-1754.95PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo][more]
XP_008446938.12.6e-1754.95PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001962Bhi12M001962mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G001962Cucumber (Gy14) v1cgywgoB205
Bhi12G001962Cucumber (Gy14) v2cgybwgoB522
Bhi12G001962Cucurbita maxima (Rimu)cmawgoB0457
Bhi12G001962Cucurbita maxima (Rimu)cmawgoB1094
Bhi12G001962Cucurbita moschata (Rifu)cmowgoB0455
Bhi12G001962Cucurbita moschata (Rifu)cmowgoB1088
Bhi12G001962Cucurbita pepo (Zucchini)cpewgoB0174
Bhi12G001962Cucurbita pepo (Zucchini)cpewgoB0384
Bhi12G001962Wild cucumber (PI 183967)cpiwgoB549
Bhi12G001962Cucumber (Chinese Long) v3cucwgoB562
Bhi12G001962Cucumber (Chinese Long) v2cuwgoB545
Bhi12G001962Bottle gourd (USVL1VR-Ls)lsiwgoB011
Bhi12G001962Melon (DHL92) v3.6.1medwgoB094
Bhi12G001962Melon (DHL92) v3.5.1mewgoB093
Bhi12G001962Watermelon (Charleston Gray)wcgwgoB499
Bhi12G001962Watermelon (97103) v2wgowmbB094
Bhi12G001962Watermelon (97103) v1wgowmB093
Bhi12G001962Silver-seed gourdcarwgoB0092
Bhi12G001962Silver-seed gourdcarwgoB0172