Bhi12G001913 (gene) Wax gourd

Overview
NameBhi12G001913
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionAmaranthin-like lectin
Locationchr12 : 66939811 .. 66940188 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACTACCAAGGTTTGGTTGCTTCAAATCAACAACAAATGGAAAGTACCTGACCTACATAGATAAAGTTTTTTTGTTGCCATATAGCTTAGTTGAGTTGATCAATTCTCGCAGCAAATATGCTTTGGAGCCTGCAGCCAATGGAGAAGTTGGTGTATTGAACATAAGATGTTGCTACAACAACAAGTATTGGAAGGCTGAATCTTCCTCCAGCCTATGGACTGTTGCTGCAGCTTCCCAGCCAAACGAAAACAAATCCGATTCGTCTTGCACTTTGTTCGTGTTCGCCACAAACTCTGCCGGTGCTCACGAAATCACCCACGTAAACCGTGGCGAGCCTGTCGTGTTGTATGGCGACGCCCATTCGATCATCTAA

mRNA sequence

ATGACACTACCAAGGTTTGGTTGCTTCAAATCAACAACAAATGGAAAGTACCTGACCTACATAGATAAAGTTTTTTTGTTGCCATATAGCTTAGTTGAGTTGATCAATTCTCGCAGCAAATATGCTTTGGAGCCTGCAGCCAATGGAGAAGTTGGTGTATTGAACATAAGATGTTGCTACAACAACAAGTATTGGAAGGCTGAATCTTCCTCCAGCCTATGGACTGTTGCTGCAGCTTCCCAGCCAAACGAAAACAAATCCGATTCGTCTTGCACTTTGTTCGTGTTCGCCACAAACTCTGCCGGTGCTCACGAAATCACCCACGTAAACCGTGGCGAGCCTGTCGTGTTGTATGGCGACGCCCATTCGATCATCTAA

Coding sequence (CDS)

ATGACACTACCAAGGTTTGGTTGCTTCAAATCAACAACAAATGGAAAGTACCTGACCTACATAGATAAAGTTTTTTTGTTGCCATATAGCTTAGTTGAGTTGATCAATTCTCGCAGCAAATATGCTTTGGAGCCTGCAGCCAATGGAGAAGTTGGTGTATTGAACATAAGATGTTGCTACAACAACAAGTATTGGAAGGCTGAATCTTCCTCCAGCCTATGGACTGTTGCTGCAGCTTCCCAGCCAAACGAAAACAAATCCGATTCGTCTTGCACTTTGTTCGTGTTCGCCACAAACTCTGCCGGTGCTCACGAAATCACCCACGTAAACCGTGGCGAGCCTGTCGTGTTGTATGGCGACGCCCATTCGATCATCTAA

Protein sequence

MTLPRFGCFKSTTNGKYLTYIDKVFLLPYSLVELINSRSKYALEPAANGEVGVLNIRCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLFVFATNSAGAHEITHVNRGEPVVLYGDAHSII
Homology
[Close]
BLAST of Bhi12G001913 vs. TrEMBL
Match: tr|A0A1S3C8E4|A0A1S3C8E4_CUCME (uncharacterized protein LOC103497999 OS=Cucumis melo OX=3656 GN=LOC103497999 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-21
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVFLLPYSLVELINSRSKYALEPAANGEVGVLNIRCCY 60
           MTLPRF  F+S   G YL+YID    L Y   +LI SR+K+AL+PA+NGE  V NIRCCY
Sbjct: 1   MTLPRFVGFQS-VRGSYLSYIDDGQTLAYISDDLIASRNKFALDPASNGEDDVFNIRCCY 60

Query: 61  NNKYWKAE-----SSSSLWTVAAASQPNENKSDSSCTLFVFATNSAGAHEITHVNRG 113
           N KYW  E      S+ +  VA ASQPNEN+SD + TLF F     G ++I HV+ G
Sbjct: 61  NGKYWMPELKVDGYSTFILVVAKASQPNENESDRTSTLFKFVLQEIGRYDIIHVSTG 116

[Close]
BLAST of Bhi12G001913 vs. TrEMBL
Match: tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH (Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10740 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.8e-16
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPRF   KS  N KYL YI++       L +S  E+++   KY +E A NG+ G+++I
Sbjct: 1   MALPRFVVLKSNYNDKYLRYINEDVQVHGFLQFSGEEVVSPYVKYEVEMAKNGK-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   SSS  W VA A +P E++S  SCTLF  V+A ++       HV  G  
Sbjct: 61  RCCYNNKYWVRWSSSHWWIVAGADEPEEDQSKWSCTLFEPVYADDAKTIVRFRHVQLGHN 120

[Close]
BLAST of Bhi12G001913 vs. TrEMBL
Match: tr|F6HZZ7|F6HZZ7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06110 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15
Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPR+   KS  N KYL YI +       L +S  E++   SKY +E A NG+ G+++I
Sbjct: 1   MALPRYVVLKSKYNNKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVEMAKNGK-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   S +  W VA A +P+E++S  SCTLF  V+    A   +  HV  G  
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVYVDGDAQTLQFRHVQLGHY 120

[Close]
BLAST of Bhi12G001913 vs. TrEMBL
Match: tr|D7U3H5|D7U3H5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06000 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.4e-15
Identity = 52/124 (41.94%), Postives = 69/124 (55.65%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPR+   KS  N KYL YI +       L +S  E++   SKY +E A NG+ G+++I
Sbjct: 1   MALPRYVVLKSKYNDKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVERAKNGK-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   S +  W VA A +P+E++S  SCTLF  V    +A      HV  G  
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHY 120

[Close]
BLAST of Bhi12G001913 vs. TrEMBL
Match: tr|F6HZZ6|F6HZZ6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 52/124 (41.94%), Postives = 67/124 (54.03%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPR+   KS  N KYL YI +       L +S  E++   SKY +E A NG  G+++I
Sbjct: 1   MALPRYVVLKSKYNNKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVERAKNGG-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   S +  W VA A +P+E++S  SCTLF  V     A      HV  G  
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGDAQTLRFRHVQLGHY 120

[Close]
BLAST of Bhi12G001913 vs. NCBI nr
Match: XP_008458670.1 (PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-21
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVFLLPYSLVELINSRSKYALEPAANGEVGVLNIRCCY 60
           MTLPRF  F+S   G YL+YID    L Y   +LI SR+K+AL+PA+NGE  V NIRCCY
Sbjct: 1   MTLPRFVGFQS-VRGSYLSYIDDGQTLAYISDDLIASRNKFALDPASNGEDDVFNIRCCY 60

Query: 61  NNKYWKAE-----SSSSLWTVAAASQPNENKSDSSCTLFVFATNSAGAHEITHVNRG 113
           N KYW  E      S+ +  VA ASQPNEN+SD + TLF F     G ++I HV+ G
Sbjct: 61  NGKYWMPELKVDGYSTFILVVAKASQPNENESDRTSTLFKFVLQEIGRYDIIHVSTG 116

[Close]
BLAST of Bhi12G001913 vs. NCBI nr
Match: PSS21691.1 (Natterin-3 like [Actinidia chinensis var. chinensis])

HSP 1 Score: 92.8 bits (229), Expect = 8.8e-16
Identity = 54/124 (43.55%), Postives = 72/124 (58.06%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPRF   KS  N KYL YI++       L +S  E+++   KY +E A NG+ G+++I
Sbjct: 1   MALPRFVVLKSNYNDKYLRYINEDVQVHGFLQFSGEEVVSPYVKYEVEMAKNGK-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   SSS  W VA A +P E++S  SCTLF  V+A ++       HV  G  
Sbjct: 61  RCCYNNKYWVRWSSSHWWIVAGADEPEEDQSKWSCTLFEPVYADDAKTIVRFRHVQLGHN 120

[Close]
BLAST of Bhi12G001913 vs. NCBI nr
Match: CBI37299.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 91.3 bits (225), Expect = 2.5e-15
Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPR+   KS  N KYL YI +       L +S  E++   SKY +E A NG+ G+++I
Sbjct: 1   MALPRYVVLKSKYNNKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVEMAKNGK-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   S +  W VA A +P+E++S  SCTLF  V+    A   +  HV  G  
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVYVDGDAQTLQFRHVQLGHY 120

[Close]
BLAST of Bhi12G001913 vs. NCBI nr
Match: XP_002264911.1 (PREDICTED: uncharacterized protein LOC100263724 [Vitis vinifera])

HSP 1 Score: 91.3 bits (225), Expect = 2.5e-15
Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPR+   KS  N KYL YI +       L +S  E++   SKY +E A NG+ G+++I
Sbjct: 1   MALPRYVVLKSKYNNKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVEMAKNGK-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   S +  W VA A +P+E++S  SCTLF  V+    A   +  HV  G  
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVYVDGDAQTLQFRHVQLGHY 120

[Close]
BLAST of Bhi12G001913 vs. NCBI nr
Match: XP_002264098.1 (PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera] >CBI37294.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14
Identity = 52/124 (41.94%), Postives = 69/124 (55.65%), Query Frame = 0 

Query: 1   MTLPRFGCFKSTTNGKYLTYIDKVF----LLPYSLVELINSRSKYALEPAANGEVGVLNI 60
           M LPR+   KS  N KYL YI +       L +S  E++   SKY +E A NG+ G+++I
Sbjct: 1   MALPRYVVLKSKYNDKYLRYIHEDVQIHGFLQFSGEEVVTPYSKYQVERAKNGK-GLVHI 60

Query: 61  RCCYNNKYWKAESSSSLWTVAAASQPNENKSDSSCTLF--VFATNSAGAHEITHVNRGEP 119
           RCCYNNKYW   S +  W VA A +P+E++S  SCTLF  V    +A      HV  G  
Sbjct: 61  RCCYNNKYWVRWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHY 120

The following BLAST results are available for this feature:
BLAST of Bhi12G001913 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G001913 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G001913 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C8E4|A0A1S3C8E4_CUCME1.2e-2152.14uncharacterized protein LOC103497999 OS=Cucumis melo OX=3656 GN=LOC103497999 PE=... [more]
tr|A0A2R6R6R8|A0A2R6R6R8_ACTCH5.8e-1643.55Natterin-3 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc107... [more]
tr|F6HZZ7|F6HZZ7_VITVI1.7e-1541.94Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06110 PE=4 SV=... [more]
tr|D7U3H5|D7U3H5_VITVI8.4e-1541.94Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06000 PE=4 SV=... [more]
tr|F6HZZ6|F6HZZ6_VITVI1.9e-1441.94Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g06090 PE=4 SV=... [more]
BLAST of Bhi12G001913 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458670.11.8e-2152.14PREDICTED: uncharacterized protein LOC103497999 [Cucumis melo][more]
PSS21691.18.8e-1643.55Natterin-3 like [Actinidia chinensis var. chinensis][more]
CBI37299.32.5e-1541.94unnamed protein product, partial [Vitis vinifera][more]
XP_002264911.12.5e-1541.94PREDICTED: uncharacterized protein LOC100263724 [Vitis vinifera][more]
XP_002264098.11.3e-1441.94PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera] >CBI37294.3 unn... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036242Agglutinin_dom_sf
IPR008998Agglutinin
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001913Bhi12M001913mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 1..124
e-value: 3.6E-27
score: 96.8
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 3..113
IPR008998Agglutinin domainPFAMPF07468Agglutinincoord: 2..95
e-value: 7.8E-15
score: 55.3
IPR036242Agglutinin domain superfamilySUPERFAMILYSSF50382Agglutinincoord: 1..95

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G001913Cucumber (Gy14) v1cgywgoB205
Bhi12G001913Cucumber (Gy14) v2cgybwgoB522
Bhi12G001913Cucurbita maxima (Rimu)cmawgoB0457
Bhi12G001913Cucurbita maxima (Rimu)cmawgoB1099
Bhi12G001913Cucurbita moschata (Rifu)cmowgoB0455
Bhi12G001913Cucurbita moschata (Rifu)cmowgoB1093
Bhi12G001913Cucurbita pepo (Zucchini)cpewgoB0174
Bhi12G001913Cucurbita pepo (Zucchini)cpewgoB0381
Bhi12G001913Wild cucumber (PI 183967)cpiwgoB549
Bhi12G001913Cucumber (Chinese Long) v3cucwgoB562
Bhi12G001913Cucumber (Chinese Long) v2cuwgoB545
Bhi12G001913Bottle gourd (USVL1VR-Ls)lsiwgoB011
Bhi12G001913Melon (DHL92) v3.6.1medwgoB094
Bhi12G001913Melon (DHL92) v3.5.1mewgoB093
Bhi12G001913Watermelon (Charleston Gray)wcgwgoB499
Bhi12G001913Watermelon (97103) v2wgowmbB094
Bhi12G001913Watermelon (97103) v1wgowmB093
Bhi12G001913Silver-seed gourdcarwgoB0667
Bhi12G001913Silver-seed gourdcarwgoB0713