Bhi12G001897 (gene) Wax gourd

NameBhi12G001897
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionGag-pro-like protein
Locationchr12 : 66149325 .. 66149630 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGAAGTCGAGGTTGATATGATTTTTGGCACTTCATCTTCAAGAGAAACTACAAAAAGAGCATCATCTATACGAGAACCATTAATCATTCATGATGAAAAGAAGTCCAGGATAGTCCCTATATCCAAAATTCAAAGGGTAATGACTATTGAAATACCAAGTCCTTTTGCTTACAAGGACAGTCAAGTTGTACCACGGAGGTATGAATGCCAGTTCATTACAAATAGCATTAATTCTATAGCAATTGGAGGAATGACTCATAGTGGGAAATGTTATAAACTAGATAGTCTGAAAATAGTTTAA

mRNA sequence

ATGCAGGAAGTCGAGGTTGATATGATTTTTGGCACTTCATCTTCAAGAGAAACTACAAAAAGAGCATCATCTATACGAGAACCATTAATCATTCATGATGAAAAGAAGTCCAGGATAGTCCCTATATCCAAAATTCAAAGGGTAATGACTATTGAAATACCAAGTCCTTTTGCTTACAAGGACAGTCAAGTTGTACCACGGAGGTATGAATGCCAGTTCATTACAAATAGCATTAATTCTATAGCAATTGGAGGAATGACTCATAGTGGGAAATGTTATAAACTAGATAGTCTGAAAATAGTTTAA

Coding sequence (CDS)

ATGCAGGAAGTCGAGGTTGATATGATTTTTGGCACTTCATCTTCAAGAGAAACTACAAAAAGAGCATCATCTATACGAGAACCATTAATCATTCATGATGAAAAGAAGTCCAGGATAGTCCCTATATCCAAAATTCAAAGGGTAATGACTATTGAAATACCAAGTCCTTTTGCTTACAAGGACAGTCAAGTTGTACCACGGAGGTATGAATGCCAGTTCATTACAAATAGCATTAATTCTATAGCAATTGGAGGAATGACTCATAGTGGGAAATGTTATAAACTAGATAGTCTGAAAATAGTTTAA

Protein sequence

MQEVEVDMIFGTSSSRETTKRASSIREPLIIHDEKKSRIVPISKIQRVMTIEIPSPFAYKDSQVVPRRYECQFITNSINSIAIGGMTHSGKCYKLDSLKIV
BLAST of Bhi12G001897 vs. TrEMBL
Match: tr|A0A1S4E260|A0A1S4E260_CUCME (uncharacterized protein LOC107991629 OS=Cucumis melo OX=3656 GN=LOC107991629 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-05
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 49  MTIEIPSPFAYKDSQVVPRRYECQFITNSI-NSIAIGGMTHSGKCYKLDSLKI 101
           +TI + SPF  KD +VVP  Y+CQ IT  + N I I G+T SG+CYK D+L +
Sbjct: 354 LTIHVSSPFKCKDLKVVPWWYDCQVITGPVDNIIGISGITRSGRCYKPDNLTV 406

BLAST of Bhi12G001897 vs. TrEMBL
Match: tr|A0A061ELG5|A0A061ELG5_THECC (Gag-pro-like protein OS=Theobroma cacao OX=3641 GN=TCM_020601 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.1e-04
Identity = 34/107 (31.78%), Postives = 58/107 (54.21%), Query Frame = 0

Query: 2   QEVEVDMIFGTSSSRETTKRASSIR----EPL-IIHDEKKSRIVPI--SKIQRVMTIEIP 61
           +EVE +++   +    T   +SS +    +PL I ++E +S +     + I+  +TIE+P
Sbjct: 530 EEVEENLVGTINGDTPTEVASSSFKGNKPKPLTIFYEENRSPMNDTFPTMIRSGITIEVP 589

Query: 62  SPFAYKDSQVVPRRYECQFITNSINS--------IAIGGMTHSGKCY 94
           SPF YK  + VP  YEC  +  + +S         ++GG+T SG+CY
Sbjct: 590 SPFPYKSDKAVPWNYECNILGTASSSPQASLEDLTSVGGITRSGRCY 636

BLAST of Bhi12G001897 vs. TrEMBL
Match: tr|A0A061EFL3|A0A061EFL3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_018989 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-04
Identity = 31/85 (36.47%), Postives = 44/85 (51.76%), Query Frame = 0

Query: 27  EPLIIHDEKKSRIVPISKIQRVMTIEIPSPFAYKDSQVVPRRYEC--------QFITNS- 86
           +PL I  E K   V   K +  M IE+P PF YKD++ VP  Y C        ++I  S 
Sbjct: 629 KPLTIFYEPKGEFVE-DKNRAKMIIEVPKPFPYKDNKAVPWNYNCNVQVSEAKKWIAESQ 688

Query: 87  ---INSIAIGGMTHSGKCYKLDSLK 100
               N  A+GG+T SG+CY  ++ +
Sbjct: 689 DDAANITAVGGITRSGRCYSPEAFE 712

BLAST of Bhi12G001897 vs. TrEMBL
Match: tr|A0A061GGS1|A0A061GGS1_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_027675 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-04
Identity = 30/85 (35.29%), Postives = 42/85 (49.41%), Query Frame = 0

Query: 27  EPLIIHDEKKSRIVPISKIQRVMTIEIPSPFAYKDSQVVPRRYEC--------QFITNS- 86
           +PL I  E K   V   K    M IE+P PF YKD + VP  Y C        ++I  S 
Sbjct: 72  KPLTIFYEPKGEFVE-DKTHAKMIIEVPKPFPYKDDKAVPWNYNCSVQVSKAKKWIAESQ 131

Query: 87  ---INSIAIGGMTHSGKCYKLDSLK 100
              +N   +GG+T SG+CY  ++ +
Sbjct: 132 DDAVNITGVGGITRSGRCYSPEAFE 155

BLAST of Bhi12G001897 vs. NCBI nr
Match: XP_022157707.1 (uncharacterized protein LOC111024360 [Momordica charantia])

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 31/101 (30.69%), Postives = 56/101 (55.45%), Query Frame = 0

Query: 3   EVEVDMIFGTSSSRETTKRASSIREPLIIHDEKKSRIVPISKIQRVMTIEIPSPFAYKDS 62
           +VE   +   +    ++K +  +   ++I  E+ + I   S I + +TI++PSP+ YKD+
Sbjct: 541 DVEAHFVNMVTEEEASSKYSFKLEPLVVIFKEQPTIISANSSILQPLTIQLPSPYKYKDN 600

Query: 63  QVVPRRYECQFITNSINSIA----IGGMTHSGKCYKLDSLK 100
           + VP  Y C  +   ++ +     + GMT SG CYKL++LK
Sbjct: 601 KAVPWHYGCHTLDEEVSIVTNISRVSGMTRSGICYKLETLK 641

BLAST of Bhi12G001897 vs. NCBI nr
Match: XP_017973148.1 (PREDICTED: uncharacterized protein LOC108661379 [Theobroma cacao])

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-05
Identity = 33/85 (38.82%), Postives = 46/85 (54.12%), Query Frame = 0

Query: 27  EPLIIHDEKKSRIVPISKIQRVMTIEIPSPFAYKDSQVVPRRYEC------------QFI 86
           +PL I  E K ++V   K Q  MTIE P PF YKD +VVP  Y C            +  
Sbjct: 226 KPLTIFYEPKGKLVE-DKTQAKMTIEAPKPFPYKDDKVVPWNYNCNVQVSNAGKWMVESQ 285

Query: 87  TNSINSIAIGGMTHSGKCYKLDSLK 100
            N++N  ++GG+T S  CY L++L+
Sbjct: 286 DNAVNITSVGGITRSECCYTLEALE 309

BLAST of Bhi12G001897 vs. NCBI nr
Match: XP_016902319.1 (PREDICTED: uncharacterized protein LOC107991629 [Cucumis melo])

HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 49  MTIEIPSPFAYKDSQVVPRRYECQFITNSI-NSIAIGGMTHSGKCYKLDSLKI 101
           +TI + SPF  KD +VVP  Y+CQ IT  + N I I G+T SG+CYK D+L +
Sbjct: 354 LTIHVSSPFKCKDLKVVPWWYDCQVITGPVDNIIGISGITRSGRCYKPDNLTV 406

BLAST of Bhi12G001897 vs. NCBI nr
Match: XP_022728769.1 (uncharacterized protein LOC111284341 [Durio zibethinus])

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-05
Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 0

Query: 26  REPLIIHDEKKSRIVPISKIQR-----VMTIEIPSPFAYKDSQVVPRRYECQFITN--SI 85
           R   I +DEK     P SK+++     V+TI++P PF Y++ + VP +Y    + N  + 
Sbjct: 363 RPVTIYYDEK-----PTSKLEKPVSRPVVTIKVPGPFPYQNDKAVPWKYNYDVVVNPDTA 422

Query: 86  NSIAIGGMTHSGKCYKLDSLK 100
           N   +GG+T SG+CY L++L+
Sbjct: 423 NITGVGGITRSGRCYTLEALE 438

BLAST of Bhi12G001897 vs. NCBI nr
Match: XP_020221065.1 (uncharacterized protein LOC109803801 [Cajanus cajan])

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-04
Identity = 30/84 (35.71%), Postives = 47/84 (55.95%), Query Frame = 0

Query: 27  EPLIIHDEKKSRIVPISKIQRVMTIEIPSPFAYKDSQVVPRRYECQF----------ITN 86
           +PL++H  +   I+ + +  + +TI++P  F YKD++VVP RY  +            T+
Sbjct: 184 KPLVVHYTRGKNILNVDR-PKPITIQVPRAFPYKDNKVVPWRYGAKVCIDASEERLDATD 243

Query: 87  SINSIAIGGMTHSGKCYKLDSLKI 101
             N   IGGMT SG+ Y L+ LKI
Sbjct: 244 ITNVAGIGGMTRSGRIYTLEELKI 266

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S4E260|A0A1S4E260_CUCME1.7e-0550.94uncharacterized protein LOC107991629 OS=Cucumis melo OX=3656 GN=LOC107991629 PE=... [more]
tr|A0A061ELG5|A0A061ELG5_THECC4.1e-0431.78Gag-pro-like protein OS=Theobroma cacao OX=3641 GN=TCM_020601 PE=4 SV=1[more]
tr|A0A061EFL3|A0A061EFL3_THECC9.2e-0436.47Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_018989 PE=4 SV=1[more]
tr|A0A061GGS1|A0A061GGS1_THECC9.2e-0435.29Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_027675 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022157707.11.0e-0630.69uncharacterized protein LOC111024360 [Momordica charantia][more]
XP_017973148.11.5e-0538.82PREDICTED: uncharacterized protein LOC108661379 [Theobroma cacao][more]
XP_016902319.12.5e-0550.94PREDICTED: uncharacterized protein LOC107991629 [Cucumis melo][more]
XP_022728769.19.6e-0535.80uncharacterized protein LOC111284341 [Durio zibethinus][more]
XP_020221065.11.6e-0435.71uncharacterized protein LOC109803801 [Cajanus cajan][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001897Bhi12M001897mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None