Bhi12G001892 (gene) Wax gourd

NameBhi12G001892
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionAcyl-coenzyme A oxidase
Locationchr12 : 66105157 .. 66105354 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCAACCAGAGAATCGAATTGGACGATGAAGGAGGAATCTCAAGCAGGCTCCTGGCGAATAGAGCGGTTATCCTTGCACTTGACTTTGGTTCCTTTTCCCAGAGATGGTTCGTACTGGATGGGGATTGTAACGGCAATGAGACGTCAAAGGCGAAAATGGAGGTCGACATGGGGAGTTTATCAATGTACATGA

mRNA sequence

ATGGCATCAACCAGAGAATCGAATTGGACGATGAAGGAGGAATCTCAAGCAGGCTCCTGGCGAATAGAGCGGTTATCCTTGCACTTGACTTTGGTTCCTTTTCCCAGAGATGGTTCGTACTGGATGGGGATTGTAACGGCAATGAGACGTCAAAGGCGAAAATGGAGGTCGACATGGGGAGTTTATCAATGTACATGA

Coding sequence (CDS)

ATGGCATCAACCAGAGAATCGAATTGGACGATGAAGGAGGAATCTCAAGCAGGCTCCTGGCGAATAGAGCGGTTATCCTTGCACTTGACTTTGGTTCCTTTTCCCAGAGATGGTTCGTACTGGATGGGGATTGTAACGGCAATGAGACGTCAAAGGCGAAAATGGAGGTCGACATGGGGAGTTTATCAATGTACATGA

Protein sequence

MASTRESNWTMKEESQAGSWRIERLSLHLTLVPFPRDGSYWMGIVTAMRRQRRKWRSTWGVYQCT
BLAST of Bhi12G001892 vs. TrEMBL
Match: tr|A0A1S3BX82|A0A1S3BX82_CUCME (Acyl-coenzyme A oxidase OS=Cucumis melo OX=3656 GN=LOC103494416 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.7e-06
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS RESN T+++ES A S RIERLSLHLT ++P P DGSY M IVT     + K
Sbjct: 1  MASARESNRTVEDESHAASRRIERLSLHLTPMIPLPVDGSYRMEIVTCAGNSKVK 55

BLAST of Bhi12G001892 vs. TrEMBL
Match: tr|A0A0A0KZB6|A0A0A0KZB6_CUCSA (Acyl-coenzyme A oxidase OS=Cucumis sativus OX=3659 GN=Csa_4G028450 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.6e-04
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVT 47
          MAS RESN   ++ES A S RIERLSLHLT ++P P D SY M IVT
Sbjct: 1  MASPRESNRAPEDESHAASRRIERLSLHLTPMIPLPGDDSYRMEIVT 47

BLAST of Bhi12G001892 vs. NCBI nr
Match: XP_008453798.1 (PREDICTED: acyl-coenzyme A oxidase, peroxisomal [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 5.6e-06
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVTAMRRQRRK 55
          MAS RESN T+++ES A S RIERLSLHLT ++P P DGSY M IVT     + K
Sbjct: 1  MASARESNRTVEDESHAASRRIERLSLHLTPMIPLPVDGSYRMEIVTCAGNSKVK 55

BLAST of Bhi12G001892 vs. NCBI nr
Match: XP_004146872.1 (PREDICTED: acyl-coenzyme A oxidase, peroxisomal [Cucumis sativus] >KGN53221.1 hypothetical protein Csa_4G028450 [Cucumis sativus])

HSP 1 Score: 53.1 bits (126), Expect = 4.0e-04
Identity = 30/47 (63.83%), Postives = 34/47 (72.34%), Query Frame = 0

Query: 1  MASTRESNWTMKEESQAGSWRIERLSLHLT-LVPFPRDGSYWMGIVT 47
          MAS RESN   ++ES A S RIERLSLHLT ++P P D SY M IVT
Sbjct: 1  MASPRESNRAPEDESHAASRRIERLSLHLTPMIPLPGDDSYRMEIVT 47

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BX82|A0A1S3BX82_CUCME3.7e-0660.00Acyl-coenzyme A oxidase OS=Cucumis melo OX=3656 GN=LOC103494416 PE=3 SV=1[more]
tr|A0A0A0KZB6|A0A0A0KZB6_CUCSA2.6e-0463.83Acyl-coenzyme A oxidase OS=Cucumis sativus OX=3659 GN=Csa_4G028450 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_008453798.15.6e-0660.00PREDICTED: acyl-coenzyme A oxidase, peroxisomal [Cucumis melo][more]
XP_004146872.14.0e-0463.83PREDICTED: acyl-coenzyme A oxidase, peroxisomal [Cucumis sativus] >KGN53221.1 hy... [more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001892Bhi12M001892mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None