Bhi12G001631 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G001631
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr12 : 58645945 .. 58646271 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTTATCAAGCTTGAGAATCTTGATCCTCTTTTGAATGCAACCTCTCTTTTCACTAAACTTGCTAACGATCAAGCTTGCCTGAAATTTTCGCCGTCGATGTTCTCGATAATTGCTCAGTTCCCGTCCCCTCCCTTCATCGCAGTGATGCTTATGAAGCGACCGTTGTTCGCAACCTATTCCGTCGATCAGAAACACATTTCAATGATTTCCCTCCGGTCCTTCCACAATGCTTTATTGCAAGGCCAAAGATTTTCTTCAATGACCATCCATCTTCTGGAACCCATAAATCGCATACTTCTTAGATTTGAACCTTCAAGTTAG

mRNA sequence

ATGTTCTTTATCAAGCTTGAGAATCTTGATCCTCTTTTGAATGCAACCTCTCTTTTCACTAAACTTGCTAACGATCAAGCTTGCCTGAAATTTTCGCCGTCGATGTTCTCGATAATTGCTCAGTTCCCGTCCCCTCCCTTCATCGCAGTGATGCTTATGAAGCGACCGTTGTTCGCAACCTATTCCGTCGATCAGAAACACATTTCAATGATTTCCCTCCGGTCCTTCCACAATGCTTTATTGCAAGGCCAAAGATTTTCTTCAATGACCATCCATCTTCTGGAACCCATAAATCGCATACTTCTTAGATTTGAACCTTCAAGTTAG

Coding sequence (CDS)

ATGTTCTTTATCAAGCTTGAGAATCTTGATCCTCTTTTGAATGCAACCTCTCTTTTCACTAAACTTGCTAACGATCAAGCTTGCCTGAAATTTTCGCCGTCGATGTTCTCGATAATTGCTCAGTTCCCGTCCCCTCCCTTCATCGCAGTGATGCTTATGAAGCGACCGTTGTTCGCAACCTATTCCGTCGATCAGAAACACATTTCAATGATTTCCCTCCGGTCCTTCCACAATGCTTTATTGCAAGGCCAAAGATTTTCTTCAATGACCATCCATCTTCTGGAACCCATAAATCGCATACTTCTTAGATTTGAACCTTCAAGTTAG

Protein sequence

MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFATYSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFEPSS

Homology

[Close]

BLAST of Bhi12G001631 vs. TrEMBL
Match: tr|A0A0A0LIE0|A0A0A0LIE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G155090 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-29
Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF IK++NLDP L+ATSLFT+  ND+ CLKFSPS FS+IA++  P F A++ M  PLF  
Sbjct: 1   MFSIKVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVE 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFEPS 108
           YSVD+ HIS ISLR F NALL+GQ +SSM+IHL EP N IL +FEPS
Sbjct: 61  YSVDRNHISRISLRCFRNALLEGQSYSSMSIHLREPQNTILFKFEPS 107

[Close]

BLAST of Bhi12G001631 vs. TrEMBL
Match: tr|A0A0A0KB76|A0A0A0KB76_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002310 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-21
Identity = 59/107 (55.14%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF IK++ LDPLL+A SLFT + ND+ CLKFS S FSIIA++  P F A++ +  PLFA 
Sbjct: 1   MFSIKIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAE 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFEPS 108
           Y V + HI  +SL S H AL +GQ +SS+ IHL E  N I L FEPS
Sbjct: 61  YFVGRDHILRVSLLSLHTALARGQTYSSLRIHLQEEQNIICLAFEPS 107

[Close]

BLAST of Bhi12G001631 vs. TrEMBL
Match: tr|A0A1S3CL88|A0A1S3CL88_CUCME (uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.0e-21
Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF +KL+N DPLL+ATS   +++ D A LKF+PS F IIA   SP FIA + +    F T
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFE-PSS 109
           +SVD  H S +SL SFH+A+L G  F+SMTIHLL+  N+++LRF+ PSS
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSS 109

[Close]

BLAST of Bhi12G001631 vs. TrEMBL
Match: tr|A0A0A0K902|A0A0A0K902_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020220 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.8e-21
Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF +KL N DPLL+ATS F +++ D A +KF+PS F II+   SP FIA + +    F +
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFE-PSS 109
           +SVD  H S +SL SFH+A+L G  F+SMTIHLL+  N+I+LRF+ PSS
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSS 109

[Close]

BLAST of Bhi12G001631 vs. TrEMBL
Match: tr|A0A1S3C8J1|A0A1S3C8J1_CUCME (uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF ++LE  +PL++ATSL  ++A D A +KF+P M  II    SP F+A + + R LF  
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTN 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFEPSS 109
           +SVD    S +SL+ FH+A+L G  FSSMTIHLL+  N+++LRFE  S
Sbjct: 61  FSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPS 107

[Close]

BLAST of Bhi12G001631 vs. NCBI nr
Match: KGN61523.1 (hypothetical protein Csa_2G155090 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 3.5e-29
Identity = 68/107 (63.55%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF IK++NLDP L+ATSLFT+  ND+ CLKFSPS FS+IA++  P F A++ M  PLF  
Sbjct: 1   MFSIKVDNLDPFLDATSLFTEFINDEICLKFSPSTFSMIARYQCPTFFAMLFMPHPLFVE 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFEPS 108
           YSVD+ HIS ISLR F NALL+GQ +SSM+IHL EP N IL +FEPS
Sbjct: 61  YSVDRNHISRISLRCFRNALLEGQSYSSMSIHLREPQNTILFKFEPS 107

[Close]

BLAST of Bhi12G001631 vs. NCBI nr
Match: KGN45637.1 (hypothetical protein Csa_6G002310 [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 3.5e-21
Identity = 59/107 (55.14%), Postives = 74/107 (69.16%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF IK++ LDPLL+A SLFT + ND+ CLKFS S FSIIA++  P F A++ +  PLFA 
Sbjct: 1   MFSIKIDKLDPLLDAISLFTDIVNDKICLKFSLSTFSIIARYQHPFFFAMLFIPEPLFAE 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFEPS 108
           Y V + HI  +SL S H AL +GQ +SS+ IHL E  N I L FEPS
Sbjct: 61  YFVGRDHILRVSLLSLHTALARGQTYSSLRIHLQEEQNIICLAFEPS 107

[Close]

BLAST of Bhi12G001631 vs. NCBI nr
Match: XP_008464344.1 (PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-21
Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF +KL+N DPLL+ATS   +++ D A LKF+PS F IIA   SP FIA + +    F T
Sbjct: 1   MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTT 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFE-PSS 109
           +SVD  H S +SL SFH+A+L G  F+SMTIHLL+  N+++LRF+ PSS
Sbjct: 61  FSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSS 109

[Close]

BLAST of Bhi12G001631 vs. NCBI nr
Match: KGN45908.1 (hypothetical protein Csa_6G020220 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20
Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF +KL N DPLL+ATS F +++ D A +KF+PS F II+   SP FIA + +    F +
Sbjct: 1   MFLVKLTNFDPLLDATSFFAQISFDDADVKFTPSKFFIISSHRSPRFIATLQLSPQWFTS 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFE-PSS 109
           +SVD  H S +SL SFH+A+L G  F+SMTIHLL+  N+I+LRF+ PSS
Sbjct: 61  FSVDHDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQIILRFDTPSS 109

[Close]

BLAST of Bhi12G001631 vs. NCBI nr
Match: XP_008458682.1 (PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 1.8e-17
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 1   MFFIKLENLDPLLNATSLFTKLANDQACLKFSPSMFSIIAQFPSPPFIAVMLMKRPLFAT 60
           MF ++LE  +PL++ATSL  ++A D A +KF+P M  II    SP F+A + + R LF  
Sbjct: 1   MFLVRLEQFEPLIDATSLLAQVAKD-ADVKFTPLMLMIIVSNRSPQFVATLQLSRRLFTN 60

Query: 61  YSVDQKHISMISLRSFHNALLQGQRFSSMTIHLLEPINRILLRFEPSS 109
           +SVD    S +SL+ FH+A+L G  FSSMTIHLL+  N+++LRFE  S
Sbjct: 61  FSVDHNKSSKVSLQPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPS 107

The following BLAST results are available for this feature:

BLAST of Bhi12G001631 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi12G001631 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi12G001631 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIE0\|A0A0A0LIE0_CUCSA	2.3e-29	63.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G155090 PE=4 SV=1	[more]
tr\|A0A0A0KB76\|A0A0A0KB76_CUCSA	2.3e-21	55.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002310 PE=4 SV=1	[more]
tr\|A0A1S3CL88\|A0A1S3CL88_CUCME	4.0e-21	53.21	uncharacterized protein LOC103502250 OS=Cucumis melo OX=3656 GN=LOC103502250 PE=...	[more]
tr\|A0A0A0K902\|A0A0A0K902_CUCSA	8.8e-21	52.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020220 PE=4 SV=1	[more]
tr\|A0A1S3C8J1\|A0A1S3C8J1_CUCME	1.2e-17	48.15	uncharacterized protein LOC103498010 OS=Cucumis melo OX=3656 GN=LOC103498010 PE=...	[more]

BLAST of Bhi12G001631 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61523.1	3.5e-29	63.55	hypothetical protein Csa_2G155090 [Cucumis sativus]	[more]
KGN45637.1	3.5e-21	55.14	hypothetical protein Csa_6G002310 [Cucumis sativus]	[more]
XP_008464344.1	6.0e-21	53.21	PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]	[more]
KGN45908.1	1.3e-20	52.29	hypothetical protein Csa_6G020220 [Cucumis sativus]	[more]
XP_008458682.1	1.8e-17	48.15	PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001631	Bhi12M001631	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.70.10.10		coord: 1..108 e-value: 2.2E-7 score: 32.4
None	No IPR available	SUPERFAMILY	SSF55979	DNA clamp	coord: 1..105

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G001631	Cucumber (Gy14) v2	cgybwgoB510
Bhi12G001631	Cucurbita maxima (Rimu)	cmawgoB0460
Bhi12G001631	Cucurbita maxima (Rimu)	cmawgoB1100
Bhi12G001631	Cucurbita moschata (Rifu)	cmowgoB0458
Bhi12G001631	Cucurbita moschata (Rifu)	cmowgoB1094
Bhi12G001631	Cucurbita pepo (Zucchini)	cpewgoB0177
Bhi12G001631	Cucurbita pepo (Zucchini)	cpewgoB0382
Bhi12G001631	Wild cucumber (PI 183967)	cpiwgoB538
Bhi12G001631	Cucumber (Chinese Long) v3	cucwgoB550
Bhi12G001631	Cucumber (Chinese Long) v2	cuwgoB534
Bhi12G001631	Bottle gourd (USVL1VR-Ls)	lsiwgoB014
Bhi12G001631	Melon (DHL92) v3.6.1	medwgoB097
Bhi12G001631	Watermelon (Charleston Gray)	wcgwgoB504
Bhi12G001631	Watermelon (97103) v2	wgowmbB099
Bhi12G001631	Watermelon (97103) v1	wgowmB096
Bhi12G001631	Silver-seed gourd	carwgoB0081
Bhi12G001631	Silver-seed gourd	carwgoB0723