Bhi12G001553 (gene) Wax gourd

NameBhi12G001553
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCASP-like protein
Locationchr12 : 56421636 .. 56421875 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGCCCGAGAAAGGCCGGATTCGGCGTACCGGACGGATCGCGGTCGGAGACGACAACGGCTAGGTTTTGCGATCTCATTGTGAGGTTTGTGGCGATGATTCTAACTTTGGCTGCTGCTGTGGTTATCGGCGTCGATAAACAGACGAAAACGGTGCCGCTTCAACTCGCCGACGCGTTGCCGCCGCTCCACGTTCCGGTTACTGCACGGTGGCATTATTTATCCGCTTTTGTGTAA

mRNA sequence

ATGGACGGCCCGAGAAAGGCCGGATTCGGCGTACCGGACGGATCGCGGTCGGAGACGACAACGGCTAGGTTTTGCGATCTCATTGTGAGGTTTGTGGCGATGATTCTAACTTTGGCTGCTGCTGTGGTTATCGGCGTCGATAAACAGACGAAAACGGTGCCGCTTCAACTCGCCGACGCGTTGCCGCCGCTCCACGTTCCGGTTACTGCACGGTGGCATTATTTATCCGCTTTTGTGTAA

Coding sequence (CDS)

ATGGACGGCCCGAGAAAGGCCGGATTCGGCGTACCGGACGGATCGCGGTCGGAGACGACAACGGCTAGGTTTTGCGATCTCATTGTGAGGTTTGTGGCGATGATTCTAACTTTGGCTGCTGCTGTGGTTATCGGCGTCGATAAACAGACGAAAACGGTGCCGCTTCAACTCGCCGACGCGTTGCCGCCGCTCCACGTTCCGGTTACTGCACGGTGGCATTATTTATCCGCTTTTGTGTAA

Protein sequence

MDGPRKAGFGVPDGSRSETTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLADALPPLHVPVTARWHYLSAFV
BLAST of Bhi12G001553 vs. Swiss-Prot
Match: sp|B9HMP6|CSPL7_POPTR (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-16
Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSR-----SETTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPL 60
          M+   KA   V DG       S++  A  CDL++R +A++LTLAAA+V+GVDKQTK VP+
Sbjct: 1  MESQNKASLPVMDGLERRVVASQSEGASTCDLLLRVLALVLTLAAAIVLGVDKQTKVVPI 60

Query: 61 QLADALPPLHVPVTARWHYLSAF 79
          ++ D LP +++PV+A+WHYLSAF
Sbjct: 61 KIVDTLPAINLPVSAKWHYLSAF 83

BLAST of Bhi12G001553 vs. Swiss-Prot
Match: sp|C6TBD0|CSPL6_SOYBN (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.6e-14
Identity = 35/55 (63.64%), Postives = 47/55 (85.45%), Query Frame = 0

Query: 25 CDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLADALPPLHVPVTARWHYLSAFV 80
          CDL++R +A  +TL AA+VI VDKQTK VP+QL+D+ PPL+VP+TA+WH +SAFV
Sbjct: 23 CDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFV 77

BLAST of Bhi12G001553 vs. Swiss-Prot
Match: sp|A7NW78|CSPL5_VITVI (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.3e-13
Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSETTTA-----RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPL 60
          M+   K  FG  +    E         R  DL++R VA+ LTL AAV++GVDKQTK V L
Sbjct: 1  MEVESKTSFGGMESKSKEVKVVTGGKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSL 60

Query: 61 QLADALPPLHVPVTARWHYLSAFV 80
          QL   LPP+ VPVTA+W YLSAFV
Sbjct: 61 QLLPTLPPMDVPVTAKWRYLSAFV 84

BLAST of Bhi12G001553 vs. Swiss-Prot
Match: sp|C6SZP8|CSPL5_SOYBN (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-12
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 0

Query: 26 DLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLADALPPLHVPVTARWHYLSAFV 80
          DL++R +A  +TL AA+VI VDKQTK VP+QL+D+LPPL VP+TA+WH +SA V
Sbjct: 23 DLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIV 76

BLAST of Bhi12G001553 vs. Swiss-Prot
Match: sp|B9RT04|CSPL9_RICCO (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.3e-12
Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSETTTAR----FCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQ 60
          MD   K      DG  S     R       L++R +A +LT  AA+V GV+ QT+TVP+Q
Sbjct: 1  MDSQNKNSVDAMDGIESRGMKERGGRTNSFLVLRVLAFVLTSTAAIVHGVNNQTETVPIQ 60

Query: 61 LADALPPLHVPVTARWHYLSAFV 80
          L  ++PPL+VPV A+WHYLSAFV
Sbjct: 61 LTSSMPPLYVPVVAKWHYLSAFV 83

BLAST of Bhi12G001553 vs. TAIR10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 61.6 bits (148), Expect = 2.5e-10
Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 0

Query: 16 RSETTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLADALPPLHVPVTARWHYL 75
          + E+ + +  +L +R +A++LT+ AA V+GV KQTK VP++L   LPPL+V  TA+  YL
Sbjct: 18 KKESGSRKGLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYL 77

Query: 76 SAFV 80
          SAFV
Sbjct: 78 SAFV 81

BLAST of Bhi12G001553 vs. TAIR10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-09
Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 8  GFGVPDGSRSETTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLADALPPLHVP 67
          G  +  G R E  + +  +L +R +A+ILT+AAA V+GV KQTK V ++L   LPPL + 
Sbjct: 11 GMEMEKGKR-ELGSRKGVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDIT 70

Query: 68 VTARWHYLSAFV 80
           TA+  YLSAFV
Sbjct: 71 TTAKASYLSAFV 81

BLAST of Bhi12G001553 vs. TrEMBL
Match: tr|A0A1S3C7G4|A0A1S3C7G4_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103497879 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-31
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSETT--TARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLA 60
          MDG RKAGFGVPDGSRSETT  T RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLA
Sbjct: 1  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLA 60

Query: 61 DALPPLHVPVTARWHYLSAFV 80
           +LPPLHVPVTARWHYLS+FV
Sbjct: 61 ASLPPLHVPVTARWHYLSSFV 81

BLAST of Bhi12G001553 vs. TrEMBL
Match: tr|A0A0A0KBW8|A0A0A0KBW8_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G199810 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 9.9e-30
Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSET---TTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
          MDG RKAGFGVPDGSRSET   TT RFCDLIVRFVAMILTLAAAVVIGVDKQTK VPLQL
Sbjct: 1  MDGHRKAGFGVPDGSRSETTTKTTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKMVPLQL 60

Query: 61 ADALPPLHVPVTARWHYLSAFV 80
          A +LPP+HVPVTARWHYLSA V
Sbjct: 61 ATSLPPVHVPVTARWHYLSALV 82

BLAST of Bhi12G001553 vs. TrEMBL
Match: tr|V7BS45|V7BS45_PHAVU (CASP-like protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G161900g PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-16
Identity = 46/84 (54.76%), Postives = 59/84 (70.24%), Query Frame = 0

Query: 1   MDGPRKAGFGVPDGSRSE-----TTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPL 60
           MDG  K  F V +GS S       +  R CDL++R +A +LTL AAVVIG DKQT  VP+
Sbjct: 102 MDGESKGSFNVMEGSESNGKGGCGSVVRICDLVLRILAFVLTLVAAVVIGADKQTAIVPI 161

Query: 61  QLADALPPLHVPVTARWHYLSAFV 80
           +L +++PPL+VPV A+WHYLSAFV
Sbjct: 162 KLVESMPPLYVPVAAKWHYLSAFV 185

BLAST of Bhi12G001553 vs. TrEMBL
Match: tr|A0A1S3VJF4|A0A1S3VJF4_VIGRR (CASP-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106775596 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-16
Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSE-----TTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPL 60
          M+G RK  F V +GS +       +  R CDL++R +A +LTL AAVVIG DKQT  VP+
Sbjct: 1  MEGQRKGSFNVMEGSEANGKRWCGSVVRTCDLVLRLLAFLLTLVAAVVIGADKQTAVVPI 60

Query: 61 QLADALPPLHVPVTARWHYLSAFV 80
          +L +++PPL+VPV A+WHYLSAFV
Sbjct: 61 KLVESMPPLYVPVAAKWHYLSAFV 84

BLAST of Bhi12G001553 vs. TrEMBL
Match: tr|A0A0S3S3H5|A0A0S3S3H5_PHAAN (CASP-like protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G070500 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-15
Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRS-----ETTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPL 60
          M+G RK  F V + S         +  R CDL++R +A +LTL AAVVIG DKQT TVP+
Sbjct: 1  MEGQRKGSFNVMEESEGNGKGWRGSVVRTCDLVLRLLAFLLTLVAAVVIGADKQTATVPI 60

Query: 61 QLADALPPLHVPVTARWHYLSAFV 80
          +L +++PPL+VPV A+WHYLSAFV
Sbjct: 61 KLVESMPPLYVPVAAKWHYLSAFV 84

BLAST of Bhi12G001553 vs. NCBI nr
Match: XP_008458485.1 (PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo])

HSP 1 Score: 142.5 bits (358), Expect = 6.1e-31
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSETT--TARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLA 60
          MDG RKAGFGVPDGSRSETT  T RFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLA
Sbjct: 1  MDGHRKAGFGVPDGSRSETTTRTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLA 60

Query: 61 DALPPLHVPVTARWHYLSAFV 80
           +LPPLHVPVTARWHYLS+FV
Sbjct: 61 ASLPPLHVPVTARWHYLSSFV 81

BLAST of Bhi12G001553 vs. NCBI nr
Match: XP_004150813.1 (PREDICTED: CASP-like protein 1E1 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSET---TTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
          MDG RKAGFGVPDGSRSET   TT RFCDLIVRFVAMILTLAAAVVIGVDKQTK VPLQL
Sbjct: 1  MDGHRKAGFGVPDGSRSETTTKTTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKMVPLQL 60

Query: 61 ADALPPLHVPVTARWHYLSAFV 80
          A +LPP+HVPVTARWHYLSA V
Sbjct: 61 ATSLPPVHVPVTARWHYLSALV 82

BLAST of Bhi12G001553 vs. NCBI nr
Match: KGN47205.1 (hypothetical protein Csa_6G199810 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSET---TTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQL 60
          MDG RKAGFGVPDGSRSET   TT RFCDLIVRFVAMILTLAAAVVIGVDKQTK VPLQL
Sbjct: 1  MDGHRKAGFGVPDGSRSETTTKTTGRFCDLIVRFVAMILTLAAAVVIGVDKQTKMVPLQL 60

Query: 61 ADALPPLHVPVTARWHYLSAFV 80
          A +LPP+HVPVTARWHYLSA V
Sbjct: 61 ATSLPPVHVPVTARWHYLSALV 82

BLAST of Bhi12G001553 vs. NCBI nr
Match: XP_022959040.1 (LOW QUALITY PROTEIN: CASP-like protein 1E1 [Cucurbita moschata])

HSP 1 Score: 126.3 bits (316), Expect = 4.5e-26
Identity = 66/79 (83.54%), Postives = 69/79 (87.34%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSETTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLADA 60
          MDG RKAGFGV DG  SETTTARFCDLI+RFVAMILTLAAA+VIGVDKQ KTV LQL  A
Sbjct: 1  MDGQRKAGFGVSDG--SETTTARFCDLILRFVAMILTLAAAIVIGVDKQAKTVSLQLTAA 60

Query: 61 LPPLHVPVTARWHYLSAFV 80
          LPPL +PVTARWHY SAFV
Sbjct: 61 LPPLRIPVTARWHYSSAFV 77

BLAST of Bhi12G001553 vs. NCBI nr
Match: XP_023547703.1 (CASP-like protein 1E1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.6 bits (314), Expect = 7.7e-26
Identity = 66/79 (83.54%), Postives = 69/79 (87.34%), Query Frame = 0

Query: 1  MDGPRKAGFGVPDGSRSETTTARFCDLIVRFVAMILTLAAAVVIGVDKQTKTVPLQLADA 60
          MDG RKAGFGV DGS + TTTARFCDLI+RFVAMILTLAAAVVIGVDKQ KTV LQL  A
Sbjct: 1  MDGQRKAGFGVSDGSET-TTTARFCDLILRFVAMILTLAAAVVIGVDKQAKTVSLQLTAA 60

Query: 61 LPPLHVPVTARWHYLSAFV 80
          LPPL +PVTARWHY SAFV
Sbjct: 61 LPPLRIPVTARWHYSSAFV 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|B9HMP6|CSPL7_POPTR1.7e-1650.60CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S... [more]
sp|C6TBD0|CSPL6_SOYBN4.6e-1463.64CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1[more]
sp|A7NW78|CSPL5_VITVI2.3e-1351.19CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1[more]
sp|C6SZP8|CSPL5_SOYBN1.1e-1262.96CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1[more]
sp|B9RT04|CSPL9_RICCO4.3e-1246.99CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT4G15630.12.5e-1048.44Uncharacterised protein family (UPF0497)[more]
AT4G15620.12.1e-0947.22Uncharacterised protein family (UPF0497)[more]
Match NameE-valueIdentityDescription
tr|A0A1S3C7G4|A0A1S3C7G4_CUCME4.0e-3191.36CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103497879 PE=3 SV=1[more]
tr|A0A0A0KBW8|A0A0A0KBW8_CUCSA9.9e-3087.80CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G199810 PE=3 SV=1[more]
tr|V7BS45|V7BS45_PHAVU2.1e-1654.76CASP-like protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G161900g PE=3 SV=1[more]
tr|A0A1S3VJF4|A0A1S3VJF4_VIGRR4.8e-1653.57CASP-like protein OS=Vigna radiata var. radiata OX=3916 GN=LOC106775596 PE=3 SV=... [more]
tr|A0A0S3S3H5|A0A0S3S3H5_PHAAN1.4e-1553.57CASP-like protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G070500... [more]
Match NameE-valueIdentityDescription
XP_008458485.16.1e-3191.36PREDICTED: CASP-like protein 1E1 isoform X4 [Cucumis melo][more]
XP_004150813.11.5e-2987.80PREDICTED: CASP-like protein 1E1 [Cucumis sativus][more]
KGN47205.11.5e-2987.80hypothetical protein Csa_6G199810 [Cucumis sativus][more]
XP_022959040.14.5e-2683.54LOW QUALITY PROTEIN: CASP-like protein 1E1 [Cucurbita moschata][more]
XP_023547703.17.7e-2683.54CASP-like protein 1E1 [Cucurbita pepo subsp. pepo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006702CASP_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007043 cell-cell junction assembly
biological_process GO:0042545 cell wall modification
biological_process GO:0008150 biological_process
cellular_component GO:0048226 Casparian strip
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001553Bhi12M001553mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 21..79
e-value: 1.0E-8
score: 35.0
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 17..79
NoneNo IPR availablePANTHERPTHR11615:SF150CASP-LIKE PROTEIN 1E1-RELATEDcoord: 17..79

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Bhi12G001553Bhi01G000679Wax gourdwgowgoB028
The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G001553Watermelon (Charleston Gray)wcgwgoB492