Bhi12G001470 (gene) Wax gourd

Overview
NameBhi12G001470
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionNuclear protein
Locationchr12 : 53489749 .. 53491645 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATTGAAGTAAAACTATCTACATTTTAAATTTTTCTATCTTGTCATTTCCCTATCTTCAAGCTAGGGCACCATTTTTTATTTCCATTTCTTCGAACTTCATACTCTCCATTTCTTCAAGCTTCATACTCTCTATTTCCGATTTCCATTTGTTTAAGCTACGCAGATCATCCTCTTGATAGCTCTTTGTTACTTCAAATAGTCCCCACCATGCTTCAACGCTTTGACCTCGTGTCCATGTATGAAGCATCCCTCTGCTAGCTCTGTAGCTCGTCTTATCGCCATAACCATAGGTATACAAAATTTGTATCACTTGTTTCTGTATTCCATTTTGCTATTTTTGCTTCAGTGAAAATGCGGGTTCAATAATAATTCTCTGTTCATTTCACGAAATTAAGCACAAACTCCTTGTGGAGACTCAGTTTTATCTCCATTTTCTCTATCTCGCACTTACGATTCATTCTCTTTTGATTAGCTTATTCACAACTTGTGTAAAGTGCTTGCTCTTTTCTGTATCAACTTTGACCGTTTGCGCTTAAAACCTTGTTTAGGGTTTAAGATGATATATGAGTTGTAACTAGGCTTCTGAAATTGGAAATTTTGGTCGAATATACTTTTTATTGTTCACAGTATTGTTTTTGACTTTGTGGTAGTTCATTACTTTGTTTTAGAAATGATGAGAGATATTGAAGAAATGGATGGTTAACTTTTTTATTAAATAGCTCGAAGTGCTTATGATCAGAAATTTGTAACTTGATATGTAGGATTCAGGTTAACACCATTCATAATGTTTTATTATAATGTAGGTTCAAGGAAATCCAAAGCTTATTGCGATGGGGGATTTCTCGGTAATCTATCATTTTTTATTCTTATTTTGAGAGATTTTTAAAAATAATGCTCTTAGACTAGAAGTTTGTCAGCTTGGGTTTATAATGTGGTTTTCGATTGATTTTGTTTATGTTGCCATTGCATCATGAAAATTTGTAATATTGCTTCTAAATCTATGGTTGTTGTTTGTGTATATCATTTGCTAATGACTATATTAGGAGAATGGAAGAGATGCTATATTAGGACTTAGTGCAAAATTGGCTAGATGTTTTATTATCCAATCAACTGACTTCACTGTGTCCTGCACTAGGAGTTTCCAGTTTACCACCAATGTAAGTTTGCATAATCTCGTCGTAAACAAGATCGGAATATCAGTTTGTTGTCAATGTAGTTTAGTTACCAAGCTTGGGAGTATGGAATTTCCTTGATTACTGTGAACTGGGGTACTAGCATTGCAAAGTATTATTGAACAAAGTGTATTTTCCCAAGCTTAATTCTTAAGCTGCTTTGTTATGAGCAACATTATCATTTTGTAGTTCCCCTTCATCTTTTGAATTTGATTAAATTTTACTGTGCTTTGCAAGTTAGCGATGTGTAATTGCAGGTTAAGTCTGCAATATCTCCAATATCTCAATATCTCAAATCTCATTTAAGTCTCTTACAACTTCCAAATTTATAATTGCAGGTTTCTAGCCTCAATTCAGAACTTATATCTGTAGCTGCAGCTGAAAGGAAGTTGGTGTTCAAAGAAGGTATAGAGGAAAGATTATGTGCATATTCTCCGACTGTCGCTCATCACTTCCCAACGACAGTAAAAGAGGTAGACTAGAATCAAAAGGGAACTATTGGACCTCCTGAATATCACAATTAATCCTTTTATTTCCACAATTCAAGTGGCGAAATGGGTGGTATCTTCAACAACTTACATTGTTTTTCCCGGTTTTATACTTATTTTCTAGCTCTAAAATCTTTGATTTGCTTACATGTGAACTTTGGGTTAGTTACATTTTTTTCATGATCCTACTGAGATTTATACTAAGATTTAAATTACATTATTTGTCTTGTGTGG

mRNA sequence

GAAATTGAAGTAAAACTATCTACATTTTAAATTTTTCTATCTTGTCATTTCCCTATCTTCAAGCTAGGGCACCATTTTTTATTTCCATTTCTTCGAACTTCATACTCTCCATTTCTTCAAGCTTCATACTCTCTATTTCCGATTTCCATTTGTTTAAGCTACGCAGATCATCCTCTTGATAGCTCTTTGTTACTTCAAATAGTCCCCACCATGCTTCAACGCTTTGACCTCGTGTCCATGTATGAAGCATCCCTCTGCTAGCTCTGTAGCTCGTCTTATCGCCATAACCATAGGTTCAAGGAAATCCAAAGCTTATTGCGATGGGGGATTTCTCGGTTTCTAGCCTCAATTCAGAACTTATATCTGTAGCTGCAGCTGAAAGGAAGTTGGTGTTCAAAGAAGGTATAGAGGAAAGATTATGTGCATATTCTCCGACTGTCGCTCATCACTTCCCAACGACAGTAAAAGAGGTAGACTAGAATCAAAAGGGAACTATTGGACCTCCTGAATATCACAATTAATCCTTTTATTTCCACAATTCAAGTGGCGAAATGGGTGGTATCTTCAACAACTTACATTGTTTTTCCCGGTTTTATACTTATTTTCTAGCTCTAAAATCTTTGATTTGCTTACATGTGAACTTTGGGTTAGTTACATTTTTTTCATGATCCTACTGAGATTTATACTAAGATTTAAATTACATTATTTGTCTTGTGTGG

Coding sequence (CDS)

ATGGGGGATTTCTCGGTTTCTAGCCTCAATTCAGAACTTATATCTGTAGCTGCAGCTGAAAGGAAGTTGGTGTTCAAAGAAGGTATAGAGGAAAGATTATGTGCATATTCTCCGACTGTCGCTCATCACTTCCCAACGACAGTAAAAGAGGTAGACTAG

Protein sequence

MGDFSVSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKEVD
Homology
[Close]
BLAST of Bhi12G001470 vs. TAIR10
Match: AT1G16080.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 4.9e-07
Identity = 27/45 (60.00%), Postives = 32/45 (71.11%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VS L  EL + AAAE+ L F+E + ERLCAYS  V+ HFPT VKE
Sbjct: 233 VSRLIQELAAAAAAEKGLTFEENMVERLCAYSRAVS-HFPTAVKE 276

[Close]
BLAST of Bhi12G001470 vs. TrEMBL
Match: tr|A0A0A0K9Y7|A0A0A0K9Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431350 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-08
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL S AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 220 VSSLIAELASAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 263

[Close]
BLAST of Bhi12G001470 vs. TrEMBL
Match: tr|A0A1S3CDP5|A0A1S3CDP5_CUCME (uncharacterized protein LOC103499856 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499856 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-07
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL   AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 220 VSSLIAELACAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 263

[Close]
BLAST of Bhi12G001470 vs. TrEMBL
Match: tr|A0A1S3CE55|A0A1S3CE55_CUCME (uncharacterized protein LOC103499856 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499856 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.7e-07
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL   AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 128 VSSLIAELACAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 171

[Close]
BLAST of Bhi12G001470 vs. TrEMBL
Match: tr|I1I2E8|I1I2E8_BRADI (Uncharacterized protein OS=Brachypodium distachyon OX=15368 GN=LOC100834027 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-07
Identity = 34/45 (75.56%), Postives = 36/45 (80.00%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL S AAAER L+F EGIEERLCAYS  VA HFPT VKE
Sbjct: 230 VSSLIAELASAAAAERGLMFDEGIEERLCAYSRAVA-HFPTAVKE 273

[Close]
BLAST of Bhi12G001470 vs. TrEMBL
Match: tr|K3YIS7|K3YIS7_SETIT (Uncharacterized protein OS=Setaria italica OX=4555 GN=LOC101762210 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-06
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           V+SL +EL S AAAER L F EGIEERLCAYS  VA HFPT VKE
Sbjct: 224 VASLIAELASAAAAERGLTFDEGIEERLCAYSRAVA-HFPTAVKE 267

[Close]
BLAST of Bhi12G001470 vs. NCBI nr
Match: XP_004135887.1 (PREDICTED: uncharacterized protein LOC101216543 isoform X1 [Cucumis sativus] >KGN45202.1 hypothetical protein Csa_7G431350 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL S AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 220 VSSLIAELASAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 263

[Close]
BLAST of Bhi12G001470 vs. NCBI nr
Match: XP_011659488.1 (PREDICTED: uncharacterized protein LOC101216543 isoform X2 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL S AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 128 VSSLIAELASAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 171

[Close]
BLAST of Bhi12G001470 vs. NCBI nr
Match: XP_022954231.1 (uncharacterized protein LOC111456547 isoform X2 [Cucurbita moschata])

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL S AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 128 VSSLIAELASAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 171

[Close]
BLAST of Bhi12G001470 vs. NCBI nr
Match: XP_022954230.1 (uncharacterized protein LOC111456547 isoform X1 [Cucurbita moschata])

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL S AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 220 VSSLIAELASAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 263

[Close]
BLAST of Bhi12G001470 vs. NCBI nr
Match: XP_022991364.1 (uncharacterized protein LOC111488021 isoform X2 [Cucurbita maxima])

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 6   VSSLNSELISVAAAERKLVFKEGIEERLCAYSPTVAHHFPTTVKE 51
           VSSL +EL S AAAER+LVF+EGIEERLCAYS  VA HFPT VKE
Sbjct: 128 VSSLIAELASAAAAERQLVFEEGIEERLCAYSRAVA-HFPTAVKE 171

The following BLAST results are available for this feature:
BLAST of Bhi12G001470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G001470 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16080.14.9e-0760.00unknown protein[more]
BLAST of Bhi12G001470 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K9Y7|A0A0A0K9Y7_CUCSA7.0e-0877.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431350 PE=4 SV=1[more]
tr|A0A1S3CDP5|A0A1S3CDP5_CUCME2.7e-0775.56uncharacterized protein LOC103499856 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3CE55|A0A1S3CE55_CUCME2.7e-0775.56uncharacterized protein LOC103499856 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|I1I2E8|I1I2E8_BRADI6.0e-0775.56Uncharacterized protein OS=Brachypodium distachyon OX=15368 GN=LOC100834027 PE=4... [more]
tr|K3YIS7|K3YIS7_SETIT1.7e-0673.33Uncharacterized protein OS=Setaria italica OX=4555 GN=LOC101762210 PE=4 SV=1[more]
BLAST of Bhi12G001470 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135887.11.1e-0777.78PREDICTED: uncharacterized protein LOC101216543 isoform X1 [Cucumis sativus] >KG... [more]
XP_011659488.11.1e-0777.78PREDICTED: uncharacterized protein LOC101216543 isoform X2 [Cucumis sativus][more]
XP_022954231.11.1e-0777.78uncharacterized protein LOC111456547 isoform X2 [Cucurbita moschata][more]
XP_022954230.11.1e-0777.78uncharacterized protein LOC111456547 isoform X1 [Cucurbita moschata][more]
XP_022991364.11.1e-0777.78uncharacterized protein LOC111488021 isoform X2 [Cucurbita maxima][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001470Bhi12M001470mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34044FAMILY NOT NAMEDcoord: 5..50

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G001470Cucurbita maxima (Rimu)cmawgoB0311
Bhi12G001470Cucurbita maxima (Rimu)cmawgoB0455
Bhi12G001470Cucurbita maxima (Rimu)cmawgoB0997
Bhi12G001470Cucurbita maxima (Rimu)cmawgoB1090
Bhi12G001470Cucurbita moschata (Rifu)cmowgoB0299
Bhi12G001470Cucurbita moschata (Rifu)cmowgoB0453
Bhi12G001470Cucurbita moschata (Rifu)cmowgoB0995
Bhi12G001470Cucurbita moschata (Rifu)cmowgoB1084
Bhi12G001470Cucurbita pepo (Zucchini)cpewgoB0172
Bhi12G001470Cucurbita pepo (Zucchini)cpewgoB0388
Bhi12G001470Cucurbita pepo (Zucchini)cpewgoB0764
Bhi12G001470Cucurbita pepo (Zucchini)cpewgoB1100
Bhi12G001470Wild cucumber (PI 183967)cpiwgoB122
Bhi12G001470Wild cucumber (PI 183967)cpiwgoB251
Bhi12G001470Cucumber (Chinese Long) v3cucwgoB129
Bhi12G001470Cucumber (Chinese Long) v3cucwgoB254
Bhi12G001470Cucumber (Chinese Long) v2cuwgoB121
Bhi12G001470Cucumber (Chinese Long) v2cuwgoB251
Bhi12G001470Bottle gourd (USVL1VR-Ls)lsiwgoB007
Bhi12G001470Bottle gourd (USVL1VR-Ls)lsiwgoB421
Bhi12G001470Melon (DHL92) v3.6.1medwgoB453
Bhi12G001470Melon (DHL92) v3.6.1medwgoB515
Bhi12G001470Melon (DHL92) v3.5.1mewgoB450
Bhi12G001470Melon (DHL92) v3.5.1mewgoB514
Bhi12G001470Watermelon (Charleston Gray)wcgwgoB412
Bhi12G001470Watermelon (Charleston Gray)wcgwgoB500
Bhi12G001470Watermelon (97103) v2wgowmbB072
Bhi12G001470Watermelon (97103) v2wgowmbB095
Bhi12G001470Watermelon (97103) v1wgowmB062
Bhi12G001470Watermelon (97103) v1wgowmB104
Bhi12G001470Silver-seed gourdcarwgoB0282
Bhi12G001470Silver-seed gourdcarwgoB0290
Bhi12G001470Silver-seed gourdcarwgoB1114
Bhi12G001470Silver-seed gourdcarwgoB1265
Bhi12G001470Cucumber (Gy14) v1cgywgoB510
Bhi12G001470Cucumber (Gy14) v1cgywgoB762
Bhi12G001470Cucumber (Gy14) v2cgybwgoB117
Bhi12G001470Cucumber (Gy14) v2cgybwgoB238