Bhi12G001330 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G001330
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Peroxisomal targeting signal 2 receptor
Location	chr12 : 49194331 .. 49194531 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCATCTTTAAGACTCCCTTCAGTGGCTACTCCATCAAGTTTAACCCCTTCTACAAATCCCGCATCGCCGTTGCCACCACTCAAAATTTCGAAATCCTTGGTAATGGTCGCCTTCACGTCCTCGATATCAATCCTGCCGGTCCCATATCCGAGCACATCGCCTTCGACACCATCGATGGAGTCTACGACGTCTCATGA

mRNA sequence

ATGCCCATCTTTAAGACTCCCTTCAGTGGCTACTCCATCAAGTTTAACCCCTTCTACAAATCCCGCATCGCCGTTGCCACCACTCAAAATTTCGAAATCCTTGGTAATGGTCGCCTTCACGTCCTCGATATCAATCCTGCCGGTCCCATATCCGAGCACATCGCCTTCGACACCATCGATGGAGTCTACGACGTCTCATGA

Coding sequence (CDS)

ATGCCCATCTTTAAGACTCCCTTCAGTGGCTACTCCATCAAGTTTAACCCCTTCTACAAATCCCGCATCGCCGTTGCCACCACTCAAAATTTCGAAATCCTTGGTAATGGTCGCCTTCACGTCCTCGATATCAATCCTGCCGGTCCCATATCCGAGCACATCGCCTTCGACACCATCGATGGAGTCTACGACGTCTCATGA

Protein sequence

MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTIDGVYDVS

Homology

[Close]

BLAST of Bhi12G001330 vs. Swiss-Prot
Match: sp|Q9XF57|PEX7_ARATH (Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana OX=3702 GN=PEX7 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 2.1e-20
Identity = 42/66 (63.64%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGP-ISEHIAFDTI 60
          MP+FK PF+GYS+KF+PFY+SR+AVAT QNF ILGNGR+HVL++ P  P ++E +++DT 
Sbjct: 1  MPVFKAPFNGYSVKFSPFYESRLAVATAQNFGILGNGRIHVLELAPGAPGVTESVSYDTA 60

Query: 61 DGVYDV 66
          D VYDV
Sbjct: 61 DAVYDV 66

[Close]

BLAST of Bhi12G001330 vs. Swiss-Prot
Match: sp|O59894|PEX7_PICPA (Peroxisomal targeting signal 2 receptor OS=Komagataella pastoris OX=4922 GN=PEX7 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-11
Identity = 29/59 (49.15%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 8  FSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTIDGVYDVS 67
          FSGY+++++PFY ++IAVAT+ N+ ++GNGRL+VL I   G I   I++DT DG++ V+
Sbjct: 9  FSGYAVRYSPFYDNKIAVATSANYGLVGNGRLYVLSIMDDGNIITDISYDTQDGLFGVA 67

[Close]

BLAST of Bhi12G001330 vs. Swiss-Prot
Match: sp|Q54WA3|PEX7_DICDI (Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum OX=44689 GN=pex7 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-09
Identity = 29/64 (45.31%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          M  F + F+GYS++F+PF + R+A  T+Q+F I+GNGR ++LD+     I     FDT D
Sbjct: 1  MKRFHSHFNGYSVEFSPFEEQRLACVTSQHFGIIGNGRQYILDVLDR-DIGAFKTFDTRD 60

Query: 61 GVYD 65
          G+YD
Sbjct: 61 GLYD 63

[Close]

BLAST of Bhi12G001330 vs. Swiss-Prot
Match: sp|P39108|PEX7_YEAST (Peroxisomal targeting signal 2 receptor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PEX7 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-08
Identity = 25/59 (42.37%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 8  FSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTIDGVYDVS 67
          FSGY ++++PF+ +R+AVA   NF ++GNG+L +L+I+ +G I E  +F T D ++D++
Sbjct: 9  FSGYGVQYSPFFDNRLAVAAGSNFGLVGNGKLFILEIDRSGRIVEVNSFLTQDCLFDLA 67

[Close]

BLAST of Bhi12G001330 vs. Swiss-Prot
Match: sp|O00628|PEX7_HUMAN (Peroxisomal targeting signal 2 receptor OS=Homo sapiens OX=9606 GN=PEX7 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.6e-04
Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 10 GYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTIDGVYDVS 67
          GY+ +F+P+   R+A AT Q++ I G G L +LD + AG +    +FD  DG++DV+
Sbjct: 19 GYAAEFSPYLPGRLACATAQHYGIAGCGTLLILDPDEAG-LRLFRSFDWNDGLFDVT 74

[Close]

BLAST of Bhi12G001330 vs. TAIR10
Match: AT1G29260.1 (peroxin 7)

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-21
Identity = 42/66 (63.64%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGP-ISEHIAFDTI 60
          MP+FK PF+GYS+KF+PFY+SR+AVAT QNF ILGNGR+HVL++ P  P ++E +++DT 
Sbjct: 1  MPVFKAPFNGYSVKFSPFYESRLAVATAQNFGILGNGRIHVLELAPGAPGVTESVSYDTA 60

Query: 61 DGVYDV 66
          D VYDV
Sbjct: 61 DAVYDV 66

[Close]

BLAST of Bhi12G001330 vs. TrEMBL
Match: tr|A0A0A0KKD6|A0A0A0KKD6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519610 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-26
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP+FKTPF+GYS+KF+PFY+SRIAVAT QNF ILGNGRLHVLD+NPAGPISEHIAFDT D
Sbjct: 1  MPVFKTPFNGYSVKFSPFYESRIAVATAQNFGILGNGRLHVLDLNPAGPISEHIAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

[Close]

BLAST of Bhi12G001330 vs. TrEMBL
Match: tr|A0A1S3AZ23|A0A1S3AZ23_CUCME (peroxisome biogenesis protein 7 OS=Cucumis melo OX=3656 GN=LOC103484448 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-26
Identity = 56/66 (84.85%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP+FKTPF+GYS+KF+PFY+SRIAVAT QNF ILGNGRLHVLD+NPAGPI+EHIAFDT D
Sbjct: 1  MPVFKTPFNGYSVKFSPFYESRIAVATAQNFGILGNGRLHVLDLNPAGPITEHIAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

[Close]

BLAST of Bhi12G001330 vs. TrEMBL
Match: tr|F6HMA0|F6HMA0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g01320 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 49/66 (74.24%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 1   MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
           MP+FKTPF+GY++KF+PFY+SR+AVAT QNF ILGNGRLHVL+++PAGPISE  +FDT D
Sbjct: 75  MPVFKTPFNGYAVKFSPFYESRLAVATAQNFGILGNGRLHVLELSPAGPISEFASFDTAD 134

Query: 61  GVYDVS 67
           GVYDV+
Sbjct: 135 GVYDVT 140

[Close]

BLAST of Bhi12G001330 vs. TrEMBL
Match: tr|A5BR52|A5BR52_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004948 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 49/66 (74.24%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP+FKTPF+GY++KF+PFY+SR+AVAT QNF ILGNGRLHVL+++PAGPISE  +FDT D
Sbjct: 1  MPVFKTPFNGYAVKFSPFYESRLAVATAQNFGILGNGRLHVLELSPAGPISEFASFDTAD 60

Query: 61 GVYDVS 67
          GVYDV+
Sbjct: 61 GVYDVT 66

[Close]

BLAST of Bhi12G001330 vs. TrEMBL
Match: tr|A0A251UQW7|A0A251UQW7_HELAN (Putative peroxin 7 OS=Helianthus annuus OX=4232 GN=PEX7 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-22
Identity = 50/66 (75.76%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP FKTPF+GY++KF+PFY+ R+AVAT QNF ILGNGRLHV+D++PAGPISE  AFDT D
Sbjct: 1  MPAFKTPFNGYAVKFSPFYEQRLAVATAQNFGILGNGRLHVIDLSPAGPISEIAAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

[Close]

BLAST of Bhi12G001330 vs. NCBI nr
Match: XP_004134658.1 (PREDICTED: peroxisome biogenesis protein 7 [Cucumis sativus] >KGN49309.1 hypothetical protein Csa_6G519610 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP+FKTPF+GYS+KF+PFY+SRIAVAT QNF ILGNGRLHVLD+NPAGPISEHIAFDT D
Sbjct: 1  MPVFKTPFNGYSVKFSPFYESRIAVATAQNFGILGNGRLHVLDLNPAGPISEHIAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

[Close]

BLAST of Bhi12G001330 vs. NCBI nr
Match: XP_022926644.1 (peroxisome biogenesis protein 7 [Cucurbita moschata] >XP_023003293.1 peroxisome biogenesis protein 7 [Cucurbita maxima])

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP+FKTPF+GYS+KF+PFY+SRIAVAT QNF ILGNGRLHVLD+NPAGPISEHIAFDT D
Sbjct: 1  MPVFKTPFNGYSVKFSPFYESRIAVATAQNFGILGNGRLHVLDLNPAGPISEHIAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

[Close]

BLAST of Bhi12G001330 vs. NCBI nr
Match: XP_023518843.1 (peroxisome biogenesis protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 127.1 bits (318), Expect = 2.2e-26
Identity = 57/66 (86.36%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP+FKTPF+GYS+KF+PFY+SRIAVAT QNF ILGNGRLHVLD+NPAGPISEHIAFDT D
Sbjct: 1  MPVFKTPFNGYSVKFSPFYESRIAVATAQNFGILGNGRLHVLDLNPAGPISEHIAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

[Close]

BLAST of Bhi12G001330 vs. NCBI nr
Match: XP_008439741.1 (PREDICTED: peroxisome biogenesis protein 7 [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 4.9e-26
Identity = 56/66 (84.85%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MP+FKTPF+GYS+KF+PFY+SRIAVAT QNF ILGNGRLHVLD+NPAGPI+EHIAFDT D
Sbjct: 1  MPVFKTPFNGYSVKFSPFYESRIAVATAQNFGILGNGRLHVLDLNPAGPITEHIAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

[Close]

BLAST of Bhi12G001330 vs. NCBI nr
Match: XP_022142148.1 (peroxisome biogenesis protein 7 [Momordica charantia])

HSP 1 Score: 122.5 bits (306), Expect = 5.5e-25
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 1  MPIFKTPFSGYSIKFNPFYKSRIAVATTQNFEILGNGRLHVLDINPAGPISEHIAFDTID 60
          MPIFKTPF+GYS+KF+PFY+SR+AVAT QNF ILGNGRLHVLD+NP GPI+EH AFDT D
Sbjct: 1  MPIFKTPFNGYSVKFSPFYESRLAVATAQNFGILGNGRLHVLDLNPTGPITEHFAFDTAD 60

Query: 61 GVYDVS 67
          GVYDVS
Sbjct: 61 GVYDVS 66

The following BLAST results are available for this feature:

BLAST of Bhi12G001330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XF57\|PEX7_ARATH	2.1e-20	63.64	Peroxisome biogenesis protein 7 OS=Arabidopsis thaliana OX=3702 GN=PEX7 PE=1 SV=...	[more]
sp\|O59894\|PEX7_PICPA	3.1e-11	49.15	Peroxisomal targeting signal 2 receptor OS=Komagataella pastoris OX=4922 GN=PEX7...	[more]
sp\|Q54WA3\|PEX7_DICDI	3.7e-09	45.31	Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum OX=44689 GN=...	[more]
sp\|P39108\|PEX7_YEAST	1.9e-08	42.37	Peroxisomal targeting signal 2 receptor OS=Saccharomyces cerevisiae (strain ATCC...	[more]
sp\|O00628\|PEX7_HUMAN	1.6e-04	40.35	Peroxisomal targeting signal 2 receptor OS=Homo sapiens OX=9606 GN=PEX7 PE=1 SV=...	[more]

BLAST of Bhi12G001330 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G29260.1	1.2e-21	63.64	peroxin 7	[more]

BLAST of Bhi12G001330 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKD6\|A0A0A0KKD6_CUCSA	1.5e-26	86.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519610 PE=4 SV=1	[more]
tr\|A0A1S3AZ23\|A0A1S3AZ23_CUCME	3.3e-26	84.85	peroxisome biogenesis protein 7 OS=Cucumis melo OX=3656 GN=LOC103484448 PE=4 SV=...	[more]
tr\|F6HMA0\|F6HMA0_VITVI	1.3e-22	74.24	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g01320 PE=4 SV=...	[more]
tr\|A5BR52\|A5BR52_VITVI	1.3e-22	74.24	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_004948 PE=4 SV=1	[more]
tr\|A0A251UQW7\|A0A251UQW7_HELAN	2.2e-22	75.76	Putative peroxin 7 OS=Helianthus annuus OX=4232 GN=PEX7 PE=4 SV=1	[more]

BLAST of Bhi12G001330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134658.1	2.2e-26	86.36	PREDICTED: peroxisome biogenesis protein 7 [Cucumis sativus] >KGN49309.1 hypothe...	[more]
XP_022926644.1	2.2e-26	86.36	peroxisome biogenesis protein 7 [Cucurbita moschata] >XP_023003293.1 peroxisome ...	[more]
XP_023518843.1	2.2e-26	86.36	peroxisome biogenesis protein 7 [Cucurbita pepo subsp. pepo]	[more]
XP_008439741.1	4.9e-26	84.85	PREDICTED: peroxisome biogenesis protein 7 [Cucumis melo]	[more]
XP_022142148.1	5.5e-25	81.82	peroxisome biogenesis protein 7 [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006625	protein targeting to peroxisome
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001330	Bhi12M001330	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 3..66 e-value: 8.4E-9 score: 36.7
None	No IPR available	PANTHER	PTHR22850	WD40 REPEAT FAMILY	coord: 1..66
None	No IPR available	PANTHER	PTHR22850:SF183	PEROXISOME BIOGENESIS PROTEIN 7	coord: 1..66

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G001330	Watermelon (97103) v1	wgowmB062
Bhi12G001330	Watermelon (97103) v1	wgowmB106
Bhi12G001330	Silver-seed gourd	carwgoB0282
Bhi12G001330	Silver-seed gourd	carwgoB0290
Bhi12G001330	Silver-seed gourd	carwgoB0911
Bhi12G001330	Silver-seed gourd	carwgoB1114
Bhi12G001330	Silver-seed gourd	carwgoB1267
Bhi12G001330	Cucumber (Gy14) v1	cgywgoB510
Bhi12G001330	Cucurbita maxima (Rimu)	cmawgoB0311
Bhi12G001330	Cucurbita maxima (Rimu)	cmawgoB0455
Bhi12G001330	Cucurbita maxima (Rimu)	cmawgoB0637
Bhi12G001330	Cucurbita moschata (Rifu)	cmowgoB0637
Bhi12G001330	Cucurbita maxima (Rimu)	cmawgoB0716
Bhi12G001330	Cucurbita maxima (Rimu)	cmawgoB0997
Bhi12G001330	Cucurbita maxima (Rimu)	cmawgoB1090
Bhi12G001330	Cucurbita moschata (Rifu)	cmowgoB0299
Bhi12G001330	Cucurbita moschata (Rifu)	cmowgoB0457
Bhi12G001330	Cucurbita moschata (Rifu)	cmowgoB0710
Bhi12G001330	Cucurbita moschata (Rifu)	cmowgoB0995
Bhi12G001330	Cucurbita moschata (Rifu)	cmowgoB1084
Bhi12G001330	Cucurbita pepo (Zucchini)	cpewgoB0176
Bhi12G001330	Cucurbita pepo (Zucchini)	cpewgoB0765
Bhi12G001330	Cucurbita pepo (Zucchini)	cpewgoB0923
Bhi12G001330	Wild cucumber (PI 183967)	cpiwgoB251
Bhi12G001330	Cucumber (Chinese Long) v3	cucwgoB129
Bhi12G001330	Cucumber (Chinese Long) v3	cucwgoB254
Bhi12G001330	Cucumber (Chinese Long) v2	cuwgoB121
Bhi12G001330	Cucumber (Chinese Long) v2	cuwgoB251
Bhi12G001330	Bottle gourd (USVL1VR-Ls)	lsiwgoB007
Bhi12G001330	Bottle gourd (USVL1VR-Ls)	lsiwgoB421
Bhi12G001330	Melon (DHL92) v3.6.1	medwgoB453
Bhi12G001330	Melon (DHL92) v3.6.1	medwgoB515
Bhi12G001330	Melon (DHL92) v3.5.1	mewgoB450
Bhi12G001330	Melon (DHL92) v3.5.1	mewgoB514
Bhi12G001330	Watermelon (Charleston Gray)	wcgwgoB412
Bhi12G001330	Watermelon (Charleston Gray)	wcgwgoB503
Bhi12G001330	Watermelon (97103) v2	wgowmbB072
Bhi12G001330	Watermelon (97103) v2	wgowmbB097