Bhi12G001202 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G001202
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr12 : 44806077 .. 44806313 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGAAGGAGAGTCCGAACCAAAGAAGGATCACGCCCGAAAGAATGAAGGGGACTCGAAAACGTCGAACGAAAAAAAGGGGCGAGGTTCTGCCACAGGGGAAGGAAAGTCTCCTAAGTCCACACCTCCTAAGCCCTATTTCATTTGTAATGGGCTGCATTGGACAAGAGACTACCCGAGGAAGAACGCCCTGAGTGCTATCATAGCACAACATCGGGACAGAGAAGGCTGA

mRNA sequence

ATGGAAGAAGAAGGAGAGTCCGAACCAAAGAAGGATCACGCCCGAAAGAATGAAGGGGACTCGAAAACGTCGAACGAAAAAAAGGGGCGAGGTTCTGCCACAGGGGAAGGAAAGTCTCCTAAGTCCACACCTCCTAAGCCCTATTTCATTTGTAATGGGCTGCATTGGACAAGAGACTACCCGAGGAAGAACGCCCTGAGTGCTATCATAGCACAACATCGGGACAGAGAAGGCTGA

Coding sequence (CDS)

ATGGAAGAAGAAGGAGAGTCCGAACCAAAGAAGGATCACGCCCGAAAGAATGAAGGGGACTCGAAAACGTCGAACGAAAAAAAGGGGCGAGGTTCTGCCACAGGGGAAGGAAAGTCTCCTAAGTCCACACCTCCTAAGCCCTATTTCATTTGTAATGGGCTGCATTGGACAAGAGACTACCCGAGGAAGAACGCCCTGAGTGCTATCATAGCACAACATCGGGACAGAGAAGGCTGA

Protein sequence

MEEEGESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKNALSAIIAQHRDREG

Homology

[Close]

BLAST of Bhi12G001202 vs. TrEMBL
Match: tr|A0A1S3CE17|A0A1S3CE17_CUCME (uncharacterized protein LOC103499392 OS=Cucumis melo OX=3656 GN=LOC103499392 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-05
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+S+  K+  RK+ G  KT   K G+      G+S  S PPKP FIC G HWTRD P + 
Sbjct: 259 GKSDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGES--SNPPKPCFICKGPHWTRDCPNRK 318

Query: 65  ALSAIIAQHRD 76
           AL+A++A+ ++
Sbjct: 319 ALNALVAKFQE 327

[Close]

BLAST of Bhi12G001202 vs. TrEMBL
Match: tr|A0A1S3BG92|A0A1S3BG92_CUCME (uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-05
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+ +  K+  RK+ G  KT   K G+      G+S  S PPKPYFIC G HWTRD P + 
Sbjct: 339 GKPDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGES--SNPPKPYFICKGPHWTRDCPNRK 398

Query: 65  ALSAIIAQHRD 76
           AL+A++ + ++
Sbjct: 399 ALNALVTKFQE 407

[Close]

BLAST of Bhi12G001202 vs. TrEMBL
Match: tr|A0A1S3C1B3|A0A1S3C1B3_CUCME (uncharacterized protein LOC103495894 OS=Cucumis melo OX=3656 GN=LOC103495894 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.1e-04
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+ +  K+  RK+ G  KT   K G+      G+   S PPKP FIC G HWTRD P + 
Sbjct: 250 GKPDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGEC--SNPPKPCFICKGPHWTRDCPNRK 309

Query: 65  ALSAIIAQHRD 76
           AL+A++A+ ++
Sbjct: 310 ALNALVAKFQE 318

[Close]

BLAST of Bhi12G001202 vs. TrEMBL
Match: tr|A0A1S3B5C5|A0A1S3B5C5_CUCME (uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.4e-04
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+ +  K+  RK+ G  KT   + G+   T  G+S  S P KP FIC G HWTRD P + 
Sbjct: 301 GKPDKTKNFGRKDGGKVKTFQWRNGKNDGTHRGES--SNPSKPCFICKGPHWTRDCPNQK 360

Query: 65  ALSAIIAQHRD 76
           AL+A+IA+ ++
Sbjct: 361 ALNALIAKFQE 369

[Close]

BLAST of Bhi12G001202 vs. NCBI nr
Match: XP_008446938.1 (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo])

HSP 1 Score: 56.6 bits (135), Expect = 4.3e-05
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+ +  K+  RK+ G  KT   K G+      G+S  S PPKPYFIC G HWTRD P + 
Sbjct: 339 GKPDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGES--SNPPKPYFICKGPHWTRDCPNRK 398

Query: 65  ALSAIIAQHRD 76
           AL+A++ + ++
Sbjct: 399 ALNALVTKFQE 407

[Close]

BLAST of Bhi12G001202 vs. NCBI nr
Match: XP_008460615.1 (PREDICTED: uncharacterized protein LOC103499392 [Cucumis melo])

HSP 1 Score: 56.6 bits (135), Expect = 4.3e-05
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+S+  K+  RK+ G  KT   K G+      G+S  S PPKP FIC G HWTRD P + 
Sbjct: 259 GKSDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGES--SNPPKPCFICKGPHWTRDCPNRK 318

Query: 65  ALSAIIAQHRD 76
           AL+A++A+ ++
Sbjct: 319 ALNALVAKFQE 327

[Close]

BLAST of Bhi12G001202 vs. NCBI nr
Match: XP_008455798.1 (PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 6.3e-04
Identity = 29/71 (40.85%), Postives = 42/71 (59.15%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+ +  K+  RK+ G  KT   K G+      G+   S PPKP FIC G HWTRD P + 
Sbjct: 250 GKPDKTKNFGRKDGGKVKTFQWKNGKNDGAHRGEC--SNPPKPCFICKGPHWTRDCPNRK 309

Query: 65  ALSAIIAQHRD 76
           AL+A++A+ ++
Sbjct: 310 ALNALVAKFQE 318

[Close]

BLAST of Bhi12G001202 vs. NCBI nr
Match: XP_008442289.1 (PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 8.2e-04
Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0


Query: 5   GESEPKKDHARKNEGDSKTSNEKKGRGSATGEGKSPKSTPPKPYFICNGLHWTRDYPRKN 64
           G+ +  K+  RK+ G  KT   + G+   T  G+S  S P KP FIC G HWTRD P + 
Sbjct: 301 GKPDKTKNFGRKDGGKVKTFQWRNGKNDGTHRGES--SNPSKPCFICKGPHWTRDCPNQK 360

Query: 65  ALSAIIAQHRD 76
           AL+A+IA+ ++
Sbjct: 361 ALNALIAKFQE 369

The following BLAST results are available for this feature:

BLAST of Bhi12G001202 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi12G001202 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi12G001202 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CE17\|A0A1S3CE17_CUCME	2.9e-05	43.66	uncharacterized protein LOC103499392 OS=Cucumis melo OX=3656 GN=LOC103499392 PE=...	[more]
tr\|A0A1S3BG92\|A0A1S3BG92_CUCME	2.9e-05	42.25	uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=...	[more]
tr\|A0A1S3C1B3\|A0A1S3C1B3_CUCME	4.1e-04	40.85	uncharacterized protein LOC103495894 OS=Cucumis melo OX=3656 GN=LOC103495894 PE=...	[more]
tr\|A0A1S3B5C5\|A0A1S3B5C5_CUCME	5.4e-04	42.25	uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=...	[more]

BLAST of Bhi12G001202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446938.1	4.3e-05	42.25	PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]	[more]
XP_008460615.1	4.3e-05	43.66	PREDICTED: uncharacterized protein LOC103499392 [Cucumis melo]	[more]
XP_008455798.1	6.3e-04	40.85	PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo]	[more]
XP_008442289.1	8.2e-04	42.25	PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001202	Bhi12M001202	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G001202	Bottle gourd (USVL1VR-Ls)	lsiwgoB007
Bhi12G001202	Bottle gourd (USVL1VR-Ls)	lsiwgoB035
Bhi12G001202	Melon (DHL92) v3.6.1	medwgoB448
Bhi12G001202	Melon (DHL92) v3.5.1	mewgoB445
Bhi12G001202	Watermelon (Charleston Gray)	wcgwgoB497
Bhi12G001202	Watermelon (97103) v2	wgowmbB091
Bhi12G001202	Watermelon (97103) v1	wgowmB103
Bhi12G001202	Watermelon (97103) v1	wgowmB108
Bhi12G001202	Silver-seed gourd	carwgoB0874
Bhi12G001202	Cucurbita maxima (Rimu)	cmawgoB0378
Bhi12G001202	Cucurbita moschata (Rifu)	cmowgoB0372
Bhi12G001202	Cucurbita pepo (Zucchini)	cpewgoB0223