Bhi12G001195 (gene) Wax gourd

NameBhi12G001195
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPhotosystem II protein D1
Locationchr12 : 44619475 .. 44620222 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAATCTTTTTTGACAGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAAGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCTTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATATGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTCATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCATGTAATTAATACCTGGACTGATATTATTAACCGTGCTAATCTTGATATGGAAGTTATGCATGAATGTAACGCTCACAACTTCCCTCTAGACCTAGCTGTTGTTGAAGTTCCATCTATCAATGGATAA

mRNA sequence

GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCATGTTACATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAATCTTTTTTGACAGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAAGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCTTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATATGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTCATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCATGTAATTAATACCTGGACTGATATTATTAACCGTGCTAATCTTGATATGGAAGTTATGCATGAATGTAACGCTCACAACTTCCCTCTAGACCTAGCTGTTGTTGAAGTTCCATCTATCAATGGATAA

Coding sequence (CDS)

ATGGGTCGAGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAATCTTTTTTGACAGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTAAGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCTTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATATGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTCATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCATGTAATTAATACCTGGACTGATATTATTAACCGTGCTAATCTTGATATGGAAGTTATGCATGAATGTAACGCTCACAACTTCCCTCTAGACCTAGCTGTTGTTGAAGTTCCATCTATCAATGGATAA

Protein sequence

MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVFQAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETHNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING
BLAST of Bhi12G001195 vs. Swiss-Prot
Match: sp|Q2QDA8|PSBA_CUCSA (Photosystem II protein D1 OS=Cucumis sativus OX=3659 GN=psbA PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 5.6e-121
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. Swiss-Prot
Match: sp|P10510|PSBA_SECCE (Photosystem II protein D1 OS=Secale cereale OX=4550 GN=psbA PE=1 SV=3)

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-120
Identity = 215/227 (94.71%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGY+FGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. Swiss-Prot
Match: sp|P12463|PSBA_WHEAT (Photosystem II protein D1 OS=Triticum aestivum OX=4565 GN=psbA PE=3 SV=2)

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-120
Identity = 215/227 (94.71%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGY+FGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. Swiss-Prot
Match: sp|Q9BBU3|PSBA_LOTJA (Photosystem II protein D1 OS=Lotus japonicus OX=34305 GN=psbA PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-120
Identity = 215/227 (94.71%), Postives = 216/227 (95.15%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VE PSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353

BLAST of Bhi12G001195 vs. Swiss-Prot
Match: sp|P04998|PSBA_MEDSA (Photosystem II protein D1 OS=Medicago sativa OX=3879 GN=psbA PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-120
Identity = 215/227 (94.71%), Postives = 216/227 (95.15%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VE PSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353

BLAST of Bhi12G001195 vs. TAIR10
Match: ATCG00020.1 (photosystem II reaction center protein A)

HSP 1 Score: 431.4 bits (1108), Expect = 3.4e-121
Identity = 214/227 (94.27%), Postives = 215/227 (94.71%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VE PS NG
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353

BLAST of Bhi12G001195 vs. TAIR10
Match: ATCG00270.1 (photosystem II reaction center protein D)

HSP 1 Score: 131.3 bits (329), Expect = 7.3e-31
Identity = 68/176 (38.64%), Postives = 111/176 (63.07%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           M R++EL+  + +RP+ A+A+S P+A   +VFLIYP+GQ  +F +   G++  F F++ F
Sbjct: 127 MLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           Q  HN   +PFHM+GVAGV G +L  A+HG+ V ++L  E  +       +   Q EET+
Sbjct: 187 QGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 177
           ++V A+ ++ ++     +F+N R LHFF+   PV G+W +ALG+  +A NL  ++F
Sbjct: 247 SMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299

BLAST of Bhi12G001195 vs. TrEMBL
Match: tr|H6SZX1|H6SZX1_JUNEF (Photosystem II protein D1 OS=Juncus effusus OX=13579 GN=psbA PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 6.6e-119
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQGHVINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSI G
Sbjct: 307 VDSQGHVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSIEG 353

BLAST of Bhi12G001195 vs. TrEMBL
Match: tr|J9PXN5|J9PXN5_9ROSA (Photosystem II protein D1 OS=Fragaria mandshurica OX=538574 GN=psbA PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.1e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. TrEMBL
Match: tr|A0A223FXF7|A0A223FXF7_9ROSA (Photosystem II protein D1 OS=Malus florentina OX=106552 GN=psbA PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.1e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. TrEMBL
Match: tr|X2F6M4|X2F6M4_LAGSI (Photosystem II protein D1 OS=Lagenaria siceraria OX=3668 GN=psbA PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.1e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. TrEMBL
Match: tr|A0A223FYD1|A0A223FYD1_9ROSA (Photosystem II protein D1 OS=Malus tschonoskii OX=106571 GN=psbA PE=3 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.1e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. NCBI nr
Match: AFA27350.1 (photosystem II protein D1 (plastid) [Juncus effusus])

HSP 1 Score: 435.6 bits (1119), Expect = 1.0e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQGHVINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSI G
Sbjct: 307 VDSQGHVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSIEG 353

BLAST of Bhi12G001195 vs. NCBI nr
Match: YP_001004166.1 (photosystem II protein D1 [Ranunculus macranthus] >YP_009461451.1 photosystem II protein D1 (plastid) [Ranunculus repens] >YP_009461536.1 photosystem II protein D1 (plastid) [Ranunculus reptans] >AAZ04090.1 photosystem II protein D1, partial (chloroplast) [Ranunculus macranthus] >ABC70736.1 photosystem II protein D1 (chloroplast) [Ranunculus macranthus] >ARC98101.1 photosystem II protein D1 (plastid) [Poterium spinosum] >ARC99494.1 photosystem II protein D1 (plastid) [Dendriopoterium menendezii] >ARD01043.1 photosystem II protein D1 (plastid) [Bencomia sphaerocarpa] >ARD03901.1 photosystem II protein D1 (plastid) [Bencomia moquiniana] >AUT82768.1 photosystem II protein D1 (plastid) [Ranunculus repens] >AUT82854.1 photosystem II protein D1 (plastid) [Ranunculus flammula] >AUT82939.1 photosystem II protein D1 (plastid) [Ranunculus reptans])

HSP 1 Score: 434.9 bits (1117), Expect = 1.7e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. NCBI nr
Match: YP_009335398.1 (photosystem II protein D1 (chloroplast) [Oziroe biflora] >AEX95798.1 photosystem II protein D1 (chloroplast) [Oziroe biflora] >APO12456.1 photosystem II protein D1 (chloroplast) [Oziroe biflora])

HSP 1 Score: 434.9 bits (1117), Expect = 1.7e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. NCBI nr
Match: AFA27329.1 (photosystem II protein D1 (plastid) [Abolboda macrostachya])

HSP 1 Score: 434.9 bits (1117), Expect = 1.7e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

BLAST of Bhi12G001195 vs. NCBI nr
Match: AFQ39680.1 (photosystem II protein A, partial (plastid) [Fragaria iturupensis] >AFQ39682.1 photosystem II protein A, partial (plastid) [Fragaria x ananassa subsp. cuneifolia] >AFQ39690.1 photosystem II protein A, partial (plastid) [Fragaria viridis] >AFQ39692.1 photosystem II protein A, partial (plastid) [Fragaria nilgerrensis] >AFQ39694.1 photosystem II protein A, partial (plastid) [Fragaria nipponica] >AFQ39696.1 photosystem II protein A, partial (plastid) [Fragaria chinensis] >AFQ39700.1 photosystem II protein A, partial (plastid) [Fragaria tibetica])

HSP 1 Score: 434.9 bits (1117), Expect = 1.7e-118
Identity = 216/227 (95.15%), Postives = 217/227 (95.59%), Query Frame = 0

Query: 1   MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGIFFDSMPLGISGTFNFMIVF 60
           MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQG F D MPLGISGTFNFMIVF
Sbjct: 127 MGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVF 186

Query: 61  QAEHNILKHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENEYANEGYRFGQEEETH 120
           QAEHNIL HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENE ANEGYRFGQEEET+
Sbjct: 187 QAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246

Query: 121 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 180
           NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306

Query: 181 VDSQGHVINTWTDIINRANLDMEVMHECNAHNFPLDLAVVEVPSING 228
           VDSQG VINTW DIINRANL MEVMHE NAHNFPLDLA VEVPSING
Sbjct: 307 VDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q2QDA8|PSBA_CUCSA5.6e-12195.15Photosystem II protein D1 OS=Cucumis sativus OX=3659 GN=psbA PE=3 SV=1[more]
sp|P10510|PSBA_SECCE1.2e-12094.71Photosystem II protein D1 OS=Secale cereale OX=4550 GN=psbA PE=1 SV=3[more]
sp|P12463|PSBA_WHEAT1.2e-12094.71Photosystem II protein D1 OS=Triticum aestivum OX=4565 GN=psbA PE=3 SV=2[more]
sp|Q9BBU3|PSBA_LOTJA1.6e-12094.71Photosystem II protein D1 OS=Lotus japonicus OX=34305 GN=psbA PE=3 SV=1[more]
sp|P04998|PSBA_MEDSA1.6e-12094.71Photosystem II protein D1 OS=Medicago sativa OX=3879 GN=psbA PE=3 SV=1[more]
Match NameE-valueIdentityDescription
ATCG00020.13.4e-12194.27photosystem II reaction center protein A[more]
ATCG00270.17.3e-3138.64photosystem II reaction center protein D[more]
Match NameE-valueIdentityDescription
tr|H6SZX1|H6SZX1_JUNEF6.6e-11995.15Photosystem II protein D1 OS=Juncus effusus OX=13579 GN=psbA PE=3 SV=1[more]
tr|J9PXN5|J9PXN5_9ROSA1.1e-11895.15Photosystem II protein D1 OS=Fragaria mandshurica OX=538574 GN=psbA PE=3 SV=1[more]
tr|A0A223FXF7|A0A223FXF7_9ROSA1.1e-11895.15Photosystem II protein D1 OS=Malus florentina OX=106552 GN=psbA PE=3 SV=1[more]
tr|X2F6M4|X2F6M4_LAGSI1.1e-11895.15Photosystem II protein D1 OS=Lagenaria siceraria OX=3668 GN=psbA PE=3 SV=1[more]
tr|A0A223FYD1|A0A223FYD1_9ROSA1.1e-11895.15Photosystem II protein D1 OS=Malus tschonoskii OX=106571 GN=psbA PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AFA27350.11.0e-11895.15photosystem II protein D1 (plastid) [Juncus effusus][more]
YP_001004166.11.7e-11895.15photosystem II protein D1 [Ranunculus macranthus] >YP_009461451.1 photosystem II... [more]
YP_009335398.11.7e-11895.15photosystem II protein D1 (chloroplast) [Oziroe biflora] >AEX95798.1 photosystem... [more]
AFA27329.11.7e-11895.15photosystem II protein D1 (plastid) [Abolboda macrostachya][more]
AFQ39680.11.7e-11895.15photosystem II protein A, partial (plastid) [Fragaria iturupensis] >AFQ39682.1 p... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009772photosynthetic electron transport in photosystem II
GO:0019684photosynthesis, light reaction
Vocabulary: Molecular Function
TermDefinition
GO:0045156electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Vocabulary: INTERPRO
TermDefinition
IPR036854Photo_II_D1/D2_sf
IPR000484Photo_RC_L/M
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009635 response to herbicide
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009523 photosystem II
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001195Bhi12M001195mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000484Photosynthetic reaction centre, L/MPRINTSPR00256REACTNCENTREcoord: 71..97
score: 37.92
coord: 16..38
score: 20.91
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 1..198
e-value: 1.2E-61
score: 208.1
IPR000484Photosynthetic reaction centre, L/MPANTHERPTHR33149FAMILY NOT NAMEDcoord: 1..227
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 65..91
IPR036854Photosystem II protein D1/D2 superfamilyGENE3DG3DSA:1.20.85.10coord: 16..178
e-value: 3.1E-23
score: 84.3
IPR036854Photosystem II protein D1/D2 superfamilySUPERFAMILYSSF81483Bacterial photosystem II reaction centre, L and M subunitscoord: 1..217
NoneNo IPR availablePANTHERPTHR33149:SF11PHOTOSYSTEM II PROTEIN D1coord: 1..227

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None