Bhi12G001145 (gene) Wax gourd

NameBhi12G001145
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCytochrome b-c1 complex subunit 7
Locationchr12 : 40741825 .. 40742157 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCCTTTTTGCAGTCCTTCATTGACCCAAAGAACAAGATTGGGGATTCATCGCCAGATCGACCCAACGCCTTCGTAATTAAGGTAATTGAAACCCTAATAATTTCTTTTTCTATGGCATTGATTTCGAATTTTGTTGCGTGGAGATTGATTTTAGGTTGTGTTACTATGTTAGGTCTTCGATTCGATCTGTATGATCCATATTATGATATTGATGTAAAGGAGGCTTTGAATCGACTCCCGAGGGAGGTTGTTGATCTGGGTAATCAGCATTTAAAGTGGGCCATGGACCTTTCCATGAAGCATCAGTACCTTCCTACCGTTGCTTGA

mRNA sequence

ATGGCATCCTTTTTGCAGTCCTTCATTGACCCAAAGAACAAGATTGGGGATTCATCGCCAGATCGACCCAACGCCTTCGTAATTAAGGTAATTGAAACCCTAATAATTTCTTTTTCTATGGCATTGATTTCGAATTTTGTTGCGTGGAGATTGATTTTAGGTTGTGTTACTATGTTAGGTCTTCGATTCGATCTGTATGATCCATATTATGATATTGATGTAAAGGAGGCTTTGAATCGACTCCCGAGGGAGGTTGTTGATCTGGGTAATCAGCATTTAAAGTGGGCCATGGACCTTTCCATGAAGCATCAGTACCTTCCTACCGTTGCTTGA

Coding sequence (CDS)

ATGGCATCCTTTTTGCAGTCCTTCATTGACCCAAAGAACAAGATTGGGGATTCATCGCCAGATCGACCCAACGCCTTCGTAATTAAGGTAATTGAAACCCTAATAATTTCTTTTTCTATGGCATTGATTTCGAATTTTGTTGCGTGGAGATTGATTTTAGGTTGTGTTACTATGTTAGGTCTTCGATTCGATCTGTATGATCCATATTATGATATTGATGTAAAGGAGGCTTTGAATCGACTCCCGAGGGAGGTTGTTGATCTGGGTAATCAGCATTTAAAGTGGGCCATGGACCTTTCCATGAAGCATCAGTACCTTCCTACCGTTGCTTGA

Protein sequence

MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLGLRFDLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLPTVA
BLAST of Bhi12G001145 vs. Swiss-Prot
Match: sp|F4JWS8|QCR72_ARATH (Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana OX=3702 GN=QCR7-2 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-14
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 60  GLRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           GLR+ DLYDP YD+D+KEALNRLPRE+VD  NQ L  AMDLSMKH+YLP
Sbjct: 32  GLRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLP 80

BLAST of Bhi12G001145 vs. Swiss-Prot
Match: sp|P48502|QCR7_SOLTU (Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.2e-14
Identity = 39/49 (79.59%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 60  GLRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           GLR  DLYDP YD+DVKEALNRLPRE+VD  NQ L  AMDLSMKHQYLP
Sbjct: 33  GLRHDDLYDPMYDLDVKEALNRLPREIVDARNQRLLRAMDLSMKHQYLP 81

BLAST of Bhi12G001145 vs. Swiss-Prot
Match: sp|Q9SUU5|QCR71_ARATH (Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana OX=3702 GN=QCR7-1 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-14
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 60  GLRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           GLR+ DLYD YY +D+KEA+NRLPREVVD  NQ LK AMDLSMKH+YLP
Sbjct: 32  GLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLP 80

BLAST of Bhi12G001145 vs. TAIR10
Match: AT5G25450.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit)

HSP 1 Score: 80.1 bits (196), Expect = 9.4e-16
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 60  GLRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           GLR+ DLYDP YD+D+KEALNRLPRE+VD  NQ L  AMDLSMKH+YLP
Sbjct: 32  GLRYDDLYDPLYDLDIKEALNRLPREIVDARNQRLMRAMDLSMKHEYLP 80

BLAST of Bhi12G001145 vs. TAIR10
Match: AT4G32470.1 (Cytochrome bd ubiquinol oxidase, 14kDa subunit)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-15
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 60  GLRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           GLR+ DLYD YY +D+KEA+NRLPREVVD  NQ LK AMDLSMKH+YLP
Sbjct: 32  GLRYDDLYDQYYSMDIKEAMNRLPREVVDARNQRLKRAMDLSMKHEYLP 80

BLAST of Bhi12G001145 vs. TrEMBL
Match: tr|A0A2N9ISI5|A0A2N9ISI5_FAGSY (Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.1e-16
Identity = 57/108 (52.78%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           MASFLQSF+DPK           N F  +          M  ISN          +   G
Sbjct: 1   MASFLQSFLDPKK----------NWFAAQ---------HMKSISN---------RLRRYG 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYD+DVKEALNRLPRE++D  NQ LK AMDLSMKHQYLP
Sbjct: 61  LRYDDLYDPYYDLDVKEALNRLPREIIDARNQRLKRAMDLSMKHQYLP 80

BLAST of Bhi12G001145 vs. TrEMBL
Match: tr|A0A061GNH6|A0A061GNH6_THECC (Cytochrome b-c1 complex subunit 7 OS=Theobroma cacao OX=3641 GN=TCM_038368 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.3e-15
Identity = 54/108 (50.00%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           M+SFLQSF+DPK                        S+  AL    ++ RL        G
Sbjct: 1   MSSFLQSFLDPKK-----------------------SWLAALHMKALSTRL-----RKYG 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYD+D+KEALNRLPRE+VD  NQ LK AMDLSMKH+YLP
Sbjct: 61  LRYDDLYDPYYDLDIKEALNRLPREIVDARNQRLKRAMDLSMKHKYLP 80

BLAST of Bhi12G001145 vs. TrEMBL
Match: tr|A0A2P5S8F6|A0A2P5S8F6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD07640 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.3e-15
Identity = 54/108 (50.00%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           M+SFLQSF+DPK                        S+  AL    ++ RL        G
Sbjct: 1   MSSFLQSFLDPKK-----------------------SWLAALHMKSLSKRL-----RKYG 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYD+D+KEALNRLPRE+VD  NQ LK AMDLSMKH+YLP
Sbjct: 61  LRYDDLYDPYYDLDIKEALNRLPREIVDARNQRLKRAMDLSMKHEYLP 80

BLAST of Bhi12G001145 vs. TrEMBL
Match: tr|A0A2P6PY10|A0A2P6PY10_ROSCH (Cytochrome b-c1 complex subunit 7 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0298671 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.6e-15
Identity = 55/111 (49.55%), Postives = 64/111 (57.66%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFV---IKVIETLIISFSMALISNFVAWRLILGCVT 60
           MASFLQSFIDP          R N F    +K I T +  +                   
Sbjct: 1   MASFLQSFIDP----------RKNWFARQHMKAISTRLRHY------------------- 60

Query: 61  MLGLRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
             GLR+ DLYDPYYD+D+KEAL+RLPRE+VD  NQ LK AMDLSMKH+YLP
Sbjct: 61  --GLRYDDLYDPYYDLDIKEALHRLPREIVDARNQRLKRAMDLSMKHEYLP 80

BLAST of Bhi12G001145 vs. TrEMBL
Match: tr|A0A2I4H757|A0A2I4H757_9ROSI (Cytochrome b-c1 complex subunit 7 OS=Juglans regia OX=51240 GN=LOC109014111 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.6e-15
Identity = 53/108 (49.07%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           M+SFL+SF+DPK                   +  + +  M  ISN          +   G
Sbjct: 1   MSSFLRSFLDPK-------------------KNWLAAQHMKTISN---------RLRRYG 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYD+DVKEALNRLPRE+VD  NQ LK AMDLSMKH+YLP
Sbjct: 61  LRYDDLYDPYYDLDVKEALNRLPREIVDARNQRLKRAMDLSMKHKYLP 80

BLAST of Bhi12G001145 vs. NCBI nr
Match: XP_022730553.1 (cytochrome b-c1 complex subunit 7-2 [Durio zibethinus])

HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16
Identity = 54/108 (50.00%), Postives = 65/108 (60.19%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           MASFLQSF++PK                   +  + +  M  ISN          +   G
Sbjct: 1   MASFLQSFLNPK-------------------KNWLAALHMKSISN---------RLRKYG 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYD+D+KEALNRLPRE+VD  NQHLK AMDLSMKH+YLP
Sbjct: 61  LRYDDLYDPYYDLDIKEALNRLPREIVDARNQHLKRAMDLSMKHEYLP 80

BLAST of Bhi12G001145 vs. NCBI nr
Match: XP_022132888.1 (cytochrome b-c1 complex subunit 7-2 [Momordica charantia])

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 58/108 (53.70%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           MASFLQSFIDPK           N F  + ++ L        + NF             G
Sbjct: 1   MASFLQSFIDPKK----------NWFARQHMKAL-----SQRLRNF-------------G 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYDIDVKEALNRLPRE+VD  NQ LK AMDLSMKH YLP
Sbjct: 61  LRYDDLYDPYYDIDVKEALNRLPREIVDARNQRLKRAMDLSMKHLYLP 80

BLAST of Bhi12G001145 vs. NCBI nr
Match: XP_022937393.1 (cytochrome b-c1 complex subunit 7-2-like [Cucurbita moschata] >XP_023535588.1 cytochrome b-c1 complex subunit 7-2-like [Cucurbita pepo subsp. pepo] >XP_023535589.1 cytochrome b-c1 complex subunit 7-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 57/108 (52.78%), Postives = 65/108 (60.19%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           MASFLQSFIDPK           N F  + ++ L        + N+             G
Sbjct: 1   MASFLQSFIDPKK----------NWFARQHMKAL-----TQRLRNY-------------G 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYDIDVKEALNRLPRE+VD  NQ LK AMDLSMKH+YLP
Sbjct: 61  LRYDDLYDPYYDIDVKEALNRLPREIVDARNQRLKRAMDLSMKHKYLP 80

BLAST of Bhi12G001145 vs. NCBI nr
Match: XP_022976218.1 (cytochrome b-c1 complex subunit 7-2-like [Cucurbita maxima])

HSP 1 Score: 91.7 bits (226), Expect = 1.7e-15
Identity = 57/108 (52.78%), Postives = 65/108 (60.19%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           MASFLQSFIDPK           N F  + ++ L        + N+             G
Sbjct: 1   MASFLQSFIDPKK----------NWFARQHMKAL-----TQRLRNY-------------G 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYDIDVKEALNRLPRE+VD  NQ LK AMDLSMKH+YLP
Sbjct: 61  LRYDDLYDPYYDIDVKEALNRLPREIVDARNQRLKRAMDLSMKHKYLP 80

BLAST of Bhi12G001145 vs. NCBI nr
Match: XP_022940422.1 (cytochrome b-c1 complex subunit 7-2 [Cucurbita moschata])

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-15
Identity = 57/108 (52.78%), Postives = 64/108 (59.26%), Query Frame = 0

Query: 1   MASFLQSFIDPKNKIGDSSPDRPNAFVIKVIETLIISFSMALISNFVAWRLILGCVTMLG 60
           MASFLQS IDPK           N F  + ++ L        + N+             G
Sbjct: 1   MASFLQSLIDPKK----------NWFARQHMKAL-----TQRLRNY-------------G 60

Query: 61  LRF-DLYDPYYDIDVKEALNRLPREVVDLGNQHLKWAMDLSMKHQYLP 108
           LR+ DLYDPYYDIDVKEALNRLPRE+VD  NQ LK AMDLSMKHQYLP
Sbjct: 61  LRYDDLYDPYYDIDVKEALNRLPREIVDARNQRLKRAMDLSMKHQYLP 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|F4JWS8|QCR72_ARATH1.7e-1475.51Cytochrome b-c1 complex subunit 7-2 OS=Arabidopsis thaliana OX=3702 GN=QCR7-2 PE... [more]
sp|P48502|QCR7_SOLTU2.2e-1479.59Cytochrome b-c1 complex subunit 7 OS=Solanum tuberosum OX=4113 PE=1 SV=1[more]
sp|Q9SUU5|QCR71_ARATH2.9e-1475.51Cytochrome b-c1 complex subunit 7-1 OS=Arabidopsis thaliana OX=3702 GN=QCR7-1 PE... [more]
Match NameE-valueIdentityDescription
AT5G25450.19.4e-1675.51Cytochrome bd ubiquinol oxidase, 14kDa subunit[more]
AT4G32470.11.6e-1575.51Cytochrome bd ubiquinol oxidase, 14kDa subunit[more]
Match NameE-valueIdentityDescription
tr|A0A2N9ISI5|A0A2N9ISI5_FAGSY5.1e-1652.78Cytochrome b-c1 complex subunit 7 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54985 ... [more]
tr|A0A061GNH6|A0A061GNH6_THECC3.3e-1550.00Cytochrome b-c1 complex subunit 7 OS=Theobroma cacao OX=3641 GN=TCM_038368 PE=3 ... [more]
tr|A0A2P5S8F6|A0A2P5S8F6_GOSBA3.3e-1550.00Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD07640 PE=4 SV... [more]
tr|A0A2P6PY10|A0A2P6PY10_ROSCH5.6e-1549.55Cytochrome b-c1 complex subunit 7 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g02... [more]
tr|A0A2I4H757|A0A2I4H757_9ROSI9.6e-1549.07Cytochrome b-c1 complex subunit 7 OS=Juglans regia OX=51240 GN=LOC109014111 PE=3... [more]
Match NameE-valueIdentityDescription
XP_022730553.15.9e-1650.00cytochrome b-c1 complex subunit 7-2 [Durio zibethinus][more]
XP_022132888.11.7e-1553.70cytochrome b-c1 complex subunit 7-2 [Momordica charantia][more]
XP_022937393.11.7e-1552.78cytochrome b-c1 complex subunit 7-2-like [Cucurbita moschata] >XP_023535588.1 cy... [more]
XP_022976218.11.7e-1552.78cytochrome b-c1 complex subunit 7-2-like [Cucurbita maxima][more]
XP_022940422.12.9e-1552.78cytochrome b-c1 complex subunit 7-2 [Cucurbita moschata][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005750mitochondrial respiratory chain complex III
Vocabulary: Biological Process
TermDefinition
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
Vocabulary: INTERPRO
TermDefinition
IPR003197QCR7
IPR036544QCR7_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
cellular_component GO:0005750 mitochondrial respiratory chain complex III

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001145Bhi12M001145mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyGENE3DG3DSA:1.10.1090.10coord: 32..110
e-value: 3.4E-12
score: 48.1
IPR036544Cytochrome b-c1 complex subunit 7 superfamilySUPERFAMILYSSF8152414 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 43..107
IPR003197Cytochrome b-c1 complex subunit 7PFAMPF02271UCR_14kDcoord: 48..108
e-value: 1.7E-9
score: 37.5
IPR003197Cytochrome b-c1 complex subunit 7PANTHERPTHR12022UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEINcoord: 57..108
IPR003197Cytochrome b-c1 complex subunit 7PRODOMPD008153coord: 60..108
e-value: 3.0E-15
score: 193.0

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None