Bhi12G001004 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G001004
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Mov10 RISC complex RNA helicase
Location	chr12 : 34654900 .. 34655526 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCACACATTCTAGCCATCAACAACTTGGTCCTCATCAAAAGAATGCAATTCGTCGAATTTCGCTCTTACGTCGTTCACCACCTTACATAATCAAAGGACCACCCTGTGTTGAAGGAGCAACGTTTCAAATTTATTCAACCTCTCCTAATTGTAAAATTCTGATATGTGCTCCTAGGAATGCAACATGTGATGAGTTGATGAGATCATTGAAGGAGGTGATCCTTGATTCTAAAATGTTTCGTGCTACCGTTGGTTTTCGAGAACGAGATGAGGCACCGGATGACATATTGCCCTTGTGTGACTACAATGAGGACTTGAAGTGTTTCACTTGTCCTGAACTCGATGAGTTCCACAAATACAAGATAATATTGTCTACGTTCATGAGCAGCTTTCGACTACATGATAAAGGCTTGGCTGCTGGACATTTTACCCATATTTTTTTGTTGGATGCATCGGAAGCAATCGAGCCCGAGGTTTTGGTCTTGGTGCCTTTGACTAAGTTTTCCATTGATACTACTAATGTCATAGTTACTGGAAAGACATGGAAACAACCATGTTGGGTTCGCTCGAAGCTATGGATTGAGGATATCGTACTTCAAGAGACTTGCAGACATGATGCCATATAA

mRNA sequence

GTCACACATTCTAGCCATCAACAACTTGGTCCTCATCAAAAGAATGCAATTCGTCGAATTTCGCTCTTACGTCGTTCACCACCTTACATAATCAAAGGACCACCCTGTGTTGAAGGAGCAACGTTTCAAATTTATTCAACCTCTCCTAATTGTAAAATTCTGATATGTGCTCCTAGGAATGCAACATGTGATGAGTTGATGAGATCATTGAAGGAGGTGATCCTTGATTCTAAAATGTTTCGTGCTACCGTTGGTTTTCGAGAACGAGATGAGGCACCGGATGACATATTGCCCTTGTGTGACTACAATGAGGACTTGAAGTGTTTCACTTGTCCTGAACTCGATGAGTTCCACAAATACAAGATAATATTGTCTACGTTCATGAGCAGCTTTCGACTACATGATAAAGGCTTGGCTGCTGGACATTTTACCCATATTTTTTTGTTGGATGCATCGGAAGCAATCGAGCCCGAGGTTTTGGTCTTGGTGCCTTTGACTAAGTTTTCCATTGATACTACTAATGTCATAGTTACTGGAAAGACATGGAAACAACCATGTTGGGTTCGCTCGAAGCTATGGATTGAGGATATCGTACTTCAAGAGACTTGCAGACATGATGCCATATAA

Coding sequence (CDS)

GTCACACATTCTAGCCATCAACAACTTGGTCCTCATCAAAAGAATGCAATTCGTCGAATTTCGCTCTTACGTCGTTCACCACCTTACATAATCAAAGGACCACCCTGTGTTGAAGGAGCAACGTTTCAAATTTATTCAACCTCTCCTAATTGTAAAATTCTGATATGTGCTCCTAGGAATGCAACATGTGATGAGTTGATGAGATCATTGAAGGAGGTGATCCTTGATTCTAAAATGTTTCGTGCTACCGTTGGTTTTCGAGAACGAGATGAGGCACCGGATGACATATTGCCCTTGTGTGACTACAATGAGGACTTGAAGTGTTTCACTTGTCCTGAACTCGATGAGTTCCACAAATACAAGATAATATTGTCTACGTTCATGAGCAGCTTTCGACTACATGATAAAGGCTTGGCTGCTGGACATTTTACCCATATTTTTTTGTTGGATGCATCGGAAGCAATCGAGCCCGAGGTTTTGGTCTTGGTGCCTTTGACTAAGTTTTCCATTGATACTACTAATGTCATAGTTACTGGAAAGACATGGAAACAACCATGTTGGGTTCGCTCGAAGCTATGGATTGAGGATATCGTACTTCAAGAGACTTGCAGACATGATGCCATATAA

Protein sequence

VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVEGATFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKLWIEDIVLQETCRHDAI

Homology

[Close]

BLAST of Bhi12G001004 vs. Swiss-Prot
Match: sp|Q8GYD9|SDE3_ARATH (Probable RNA helicase SDE3 OS=Arabidopsis thaliana OX=3702 GN=SDE3 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22
Identity = 59/181 (32.60%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 9   LGPHQKNAIRRISLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNAT 68
           L   Q  +I  +   + +PPY+I GPP       +  A  Q+Y+T  N ++L+CAP N+ 
Sbjct: 397 LNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSA 456

Query: 69  CDELMRSLKEV----ILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFH 128
            D ++  L  +    I D+++FR     R  +E   +I+  C ++E +  F CP L    
Sbjct: 457 ADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELI--FKCPPLKALT 516

Query: 129 KYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVT 180
           +YK+++ST+MS+  L+ +G+  GHFTHI L +A +A EPE ++ V  +   +  T V++ 
Sbjct: 517 RYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAV--SNLCLTETVVVLA 573

[Close]

BLAST of Bhi12G001004 vs. Swiss-Prot
Match: sp|Q0V8H6|MOV10_BOVIN (Putative helicase MOV-10 OS=Bos taurus OX=9913 GN=MOV10 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16
Identity = 53/160 (33.12%), Postives = 82/160 (51.25%), Query Frame = 0


Query: 11  PHQKNAIRRISL-LRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNATC 70
           P Q  A++ I +   R  PYII GPP       +  A  Q+    P   IL CAP N+  
Sbjct: 501 PEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGA 560

Query: 71  DELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKII 130
           D L + L+ V L S ++R     R+    P+DI P C+++     F  P   +  +Y+++
Sbjct: 561 DLLCQRLR-VHLPSSIYRLLAPSRDIHLVPEDIKPCCNWDAKKGDFVFPSKKKLQEYRVL 620

Query: 131 LSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLV 164
           ++T +++ RL        HFTHIF+ +A  A+EPE LV +
Sbjct: 621 ITTLITASRLVSAQFPIDHFTHIFIDEAGHAMEPESLVAI 659

[Close]

BLAST of Bhi12G001004 vs. Swiss-Prot
Match: sp|Q5ZKD7|MOV10_CHICK (Putative helicase MOV-10 OS=Gallus gallus OX=9031 GN=MOV10 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.8e-16
Identity = 46/158 (29.11%), Postives = 79/158 (50.00%), Query Frame = 0


Query: 23  LRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNATCDELMRSLKEVILD 82
           + R  PY+I GPP       +  A  Q++S   + +IL CAP N+  D L + L   I  
Sbjct: 506 MSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARILACAPSNSAADLLCQRLLTNIAP 565

Query: 83  SKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDK 142
             ++R         + P D+ P C++++  KC+  P       Y+I+++T +++ RL   
Sbjct: 566 RYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSKKLLKPYRILITTLVTAGRLVSA 625

Query: 143 GLAAGHFTHIFLLDASEAIEPEVLVLVP--LTKFSIDT 173
               G+F+H+F+ +   A+EPE +V +   LT    DT
Sbjct: 626 NFPPGYFSHVFIDECGHAVEPESVVAIAGLLTTMDPDT 663

[Close]

BLAST of Bhi12G001004 vs. Swiss-Prot
Match: sp|Q9BXT6|M10L1_HUMAN (RNA helicase Mov10l1 OS=Homo sapiens OX=9606 GN=MOV10L1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.9e-15
Identity = 59/193 (30.57%), Postives = 97/193 (50.26%), Query Frame = 0


Query: 9   LGPHQKNAIRRI-SLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNA 68
           L  +QK A++RI S   R  PYI+ GPP       +  A  Q++   P+ +IL+CAP N+
Sbjct: 745 LNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAPSNS 804

Query: 69  TCDELMRSLKE--VILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHK 128
             D +   L E  V+  + M R     R  +   D + P C   ED+         +  +
Sbjct: 805 AADLVCLRLHESKVLQPATMVRVNATCRFEEIVIDAVKPYCRDGEDIW--------KASR 864

Query: 129 YKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVTG 188
           ++II++T  SS   +  G+  GHFTH+F+ +A +A EPE   L+PL   S  +  +++ G
Sbjct: 865 FRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPE--CLIPLGLMSDISGQIVLAG 924

Query: 189 KTWKQPCWVRSKL 193
              +    ++S+L
Sbjct: 925 DPMQLGPVIKSRL 927

[Close]

BLAST of Bhi12G001004 vs. Swiss-Prot
Match: sp|Q9HCE1|MOV10_HUMAN (Putative helicase MOV-10 OS=Homo sapiens OX=9606 GN=MOV10 PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.9e-15
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 11  PHQKNAIRRI-SLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNATC 70
           P Q  A+R I +   R  PYII GPP       +  A  Q+    P   IL CAP N+  
Sbjct: 501 PEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGA 560

Query: 71  DELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKII 130
           D L + L+ V L S ++R     R+    P+DI P C+++     +  P   +  +Y+++
Sbjct: 561 DLLCQRLR-VHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKLQEYRVL 620

Query: 131 LSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLV 164
           ++T +++ RL        HFTHIF+ +A   +EPE LV +
Sbjct: 621 ITTLITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESLVAI 659

[Close]

BLAST of Bhi12G001004 vs. TAIR10
Match: AT1G05460.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-23
Identity = 59/181 (32.60%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 9   LGPHQKNAIRRISLLRRSPPYIIKGPP------CVEGATFQIYSTSPNCKILICAPRNAT 68
           L   Q  +I  +   + +PPY+I GPP       +  A  Q+Y+T  N ++L+CAP N+ 
Sbjct: 397 LNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSA 456

Query: 69  CDELMRSLKEV----ILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFH 128
            D ++  L  +    I D+++FR     R  +E   +I+  C ++E +  F CP L    
Sbjct: 457 ADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELI--FKCPPLKALT 516

Query: 129 KYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVT 180
           +YK+++ST+MS+  L+ +G+  GHFTHI L +A +A EPE ++ V  +   +  T V++ 
Sbjct: 517 RYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAV--SNLCLTETVVVLA 573

[Close]

BLAST of Bhi12G001004 vs. TrEMBL
Match: tr|A0A2I4HSY1|A0A2I4HSY1_9ROSI (probable RNA helicase SDE3 OS=Juglans regia OX=51240 GN=LOC109021150 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 101/205 (49.27%), Postives = 133/205 (64.88%), Query Frame = 0


Query: 3   HSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPC---------------VEGATFQIYST 62
           H ++ ++G ++ +AIR IS  R SPPY++ G  C               V+ A  +IY +
Sbjct: 472 HRANHEVGKNELSAIRHISSFRGSPPYLLSGSHCVTAMDSKELSKTGIVVQEAVCEIYRS 531

Query: 63  SPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLK 122
           SP C ILICAP N+TCD L RSLK+VIL+S MFRA   FRE D  P DIL  C    +  
Sbjct: 532 SPECLILICAPTNSTCDVLTRSLKKVILESDMFRANAAFREMDGVPADILRSCPIKGE-- 591

Query: 123 CFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTK 182
           CFTCP L +  K+++ILSTF+SSFRLH++G+ AGHF+HIFLLDAS A+EPE   ++PL  
Sbjct: 592 CFTCPSLQKLRKFRVILSTFVSSFRLHNEGIPAGHFSHIFLLDASLAMEPE--AVIPLAN 651

Query: 183 FSIDTTNVIVTGKTWKQPCWVRSKL 193
           F+ D T VIVTG + +   W RS +
Sbjct: 652 FATDKTAVIVTGASTRHSAWARSDI 672

[Close]

BLAST of Bhi12G001004 vs. TrEMBL
Match: tr|A0A2P6S840|A0A2P6S840_ROSCH (Putative RNA helicase SDE3, P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0318071 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.4e-46
Identity = 100/202 (49.50%), Postives = 130/202 (64.36%), Query Frame = 0


Query: 8   QLGPHQKNAIRRISLLRRSPPYIIKGPPC-----------------VEGATFQIYSTSPN 67
           +L   Q++A+  I  ++ SPPY++ GP C                 V  A +Q+   SP 
Sbjct: 359 KLDQDQRSAVGHILRIQGSPPYVVTGPDCEAKSFAYVREPSRTGVVVSEAVYQLCRKSPE 418

Query: 68  CKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFT 127
            +ILICAP N+ CD LMRSL +VI +S MFRA   FRERDE P+DIL    Y E   CF+
Sbjct: 419 YRILICAPTNSCCDMLMRSLVKVIPESTMFRANAAFRERDEVPEDILRSSLYKE--SCFS 478

Query: 128 CPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSI 187
           CP +++  +YK+I STF+SSFRLHDKG+AAGHF+HIFL+DAS AIEPE   LV LT F++
Sbjct: 479 CPAIEKLREYKVIFSTFVSSFRLHDKGIAAGHFSHIFLVDASSAIEPE--TLVALTNFAV 538

Query: 188 DTTNVIVTGKTWKQPCWVRSKL 193
             T+VIVTG     P WVR+ +
Sbjct: 539 KATSVIVTGNHGNSPLWVRADI 556

[Close]

BLAST of Bhi12G001004 vs. TrEMBL
Match: tr|A0A2P6S815|A0A2P6S815_ROSCH (Putative RNA helicase SDE3, P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0318111 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.8e-46
Identity = 100/206 (48.54%), Postives = 133/206 (64.56%), Query Frame = 0


Query: 4   SSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPC-----------------VEGATFQIYS 63
           +++ +L   Q++A+  I  ++ SPPY++ GP C                 V  A +Q+  
Sbjct: 391 TTYHKLDQEQRSAVGHILRIQGSPPYVVTGPDCEGKSFANLREPSRTGVVVSEAVYQLCR 450

Query: 64  TSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDL 123
            SP  +ILICAP N+ CD LMRSL +VI +S MFRA   FR+RDE P+DIL L  Y E  
Sbjct: 451 KSPEYRILICAPTNSCCDMLMRSLVKVIPESTMFRANAAFRDRDEVPEDILHLSLYKE-- 510

Query: 124 KCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLT 183
             F+CP +++  +YK+I STFMSSFRLHDKG+AAGHF+HIFL+DAS AIEPE   LV LT
Sbjct: 511 SGFSCPAIEKLREYKVIFSTFMSSFRLHDKGIAAGHFSHIFLVDASSAIEPE--TLVALT 570

Query: 184 KFSIDTTNVIVTGKTWKQPCWVRSKL 193
            F++  T+VIVTG     P WVR+ +
Sbjct: 571 NFAVKATSVIVTGNHGNSPLWVRADI 592

[Close]

BLAST of Bhi12G001004 vs. TrEMBL
Match: tr|A0A2P6R4S1|A0A2P6R4S1_ROSCH (Putative RNA helicase SDE3, P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0446881 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 102/204 (50.00%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 8   QLGPHQKNAIRRISLLRRSPPYIIKGPPCV-EG------------------ATFQIYSTS 67
           +L   Q++A+  I  ++ SPPY++ GP  V EG                  A +Q+   S
Sbjct: 391 KLDRDQRSAVGHILRIQGSPPYVVTGPDSVPEGKSFAYFREPSRTGVVVSEAVYQLCQKS 450

Query: 68  PNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKC 127
           P  +ILICAP N+ CD LMRSL +VI +S MFRA   FRE++E P+DIL    Y E   C
Sbjct: 451 PEYRILICAPTNSCCDVLMRSLGKVIPESTMFRANAAFREKEEVPEDILRSSLYKE--SC 510

Query: 128 FTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKF 187
           F+CP ++E  KY++I STFMSSFRLHDKG+A GHF+HIFL+DAS AIEPE   LV LT F
Sbjct: 511 FSCPPIEELRKYRVIFSTFMSSFRLHDKGIAVGHFSHIFLVDASSAIEPE--TLVALTNF 570

Query: 188 SIDTTNVIVTGKTWKQPCWVRSKL 193
           +  TT+VIVTGK    P WVR+ +
Sbjct: 571 ADKTTSVIVTGKPGNSPRWVRADI 590

[Close]

BLAST of Bhi12G001004 vs. TrEMBL
Match: tr|A0A068U9J3|A0A068U9J3_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00019651001 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.9e-45
Identity = 97/195 (49.74%), Postives = 124/195 (63.59%), Query Frame = 0


Query: 17  IRRISLLRRSPPYIIKGPPCVE------------GATFQIYSTSPNCKILICAPRNATCD 76
           + +I  L+ +PPY+++GP C+E             A  QI    P+ KIL+CAP N TCD
Sbjct: 492 VHQILRLQGAPPYLVEGPMCIERDRLSRTGVVIVEAALQILRLDPSKKILLCAPINRTCD 551

Query: 77  ELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLCDYNEDLKCFTCPELDEFHKYKIIL 136
            LMR LK+ I DS MFRA   FRE D  P DILP C Y    +CF+CP L+E  K+KIIL
Sbjct: 552 LLMRGLKKEISDSDMFRANAAFRELDGIPVDILPSCLYESQTECFSCPSLEELGKFKIIL 611

Query: 137 STFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVLVLVPLTKFSIDTTNVIVTGKTWKQ 196
           STFMSSF+LH +G+  GHF+HIFL+DAS A EPE   +VPL  F+ D T V+VTG     
Sbjct: 612 STFMSSFKLHSEGVKVGHFSHIFLVDASSATEPE--TMVPLANFANDKTIVVVTGAPRNH 671

Query: 197 PCWVRSKLWIEDIVL 200
             W+RSK+  E+ +L
Sbjct: 672 SGWIRSKIARENGLL 684

[Close]

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022993138.1 (probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993139.1 probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993140.1 probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993141.1 probable RNA helicase SDE3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0


Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 453 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 512

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 513 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 572

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 573 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 632

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 633 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 662

[Close]

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022993134.1 (probable RNA helicase SDE3 isoform X1 [Cucurbita maxima] >XP_022993136.1 probable RNA helicase SDE3 isoform X1 [Cucurbita maxima] >XP_022993137.1 probable RNA helicase SDE3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0


Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 458 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 517

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 518 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 577

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 578 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 637

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 638 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 667

[Close]

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022993142.1 (probable RNA helicase SDE3 isoform X3 [Cucurbita maxima])

HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74
Identity = 146/212 (68.87%), Postives = 159/212 (75.00%), Query Frame = 0


Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 400 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITKTGEVVVGA 459

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 460 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 519

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CFTCP LD+ HKYKII STFMSSFRLH KGLAAGHF+HIFLLDAS AIEPE  
Sbjct: 520 DYNRDQECFTCPSLDKLHKYKIIFSTFMSSFRLHPKGLAAGHFSHIFLLDASAAIEPE-- 579

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 580 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSRI 609

[Close]

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022938441.1 (probable RNA helicase SDE3 isoform X3 [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 143/212 (67.45%), Postives = 155/212 (73.11%), Query Frame = 0


Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 517 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITRTGEVVVGA 576

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 577 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 636

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CF CP LDE HKYKII STFMSSFRL  KG A GHF+HIFLLDAS AIEPE  
Sbjct: 637 DYNRDQECFACPALDELHKYKIIFSTFMSSFRLRTKGSAPGHFSHIFLLDASAAIEPE-- 696

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 697 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSQI 726

[Close]

BLAST of Bhi12G001004 vs. NCBI nr
Match: XP_022938442.1 (probable RNA helicase SDE3 isoform X4 [Cucurbita moschata])

HSP 1 Score: 279.6 bits (714), Expect = 8.4e-72
Identity = 143/212 (67.45%), Postives = 155/212 (73.11%), Query Frame = 0


Query: 1   VTHSSHQQLGPHQKNAIRRISLLRRSPPYIIKGPPCVE--------------------GA 60
           VT S  Q L P QKNAIR+I LL+ SPPY+I+G PCV                     GA
Sbjct: 476 VTRSGQQLLDPAQKNAIRQILLLQGSPPYLIRGSPCVSSYDWAENQTRKITRTGEVVVGA 535

Query: 61  TFQIYSTSPNCKILICAPRNATCDELMRSLKEVILDSKMFRATVGFRERDEAPDDILPLC 120
            FQIYSTSPNCKILICAPRN TCDELM SLK+VI +S MFRA   FRERDE PDDILPLC
Sbjct: 536 VFQIYSTSPNCKILICAPRNTTCDELMISLKKVIPESNMFRAIAAFRERDEVPDDILPLC 595

Query: 121 DYNEDLKCFTCPELDEFHKYKIILSTFMSSFRLHDKGLAAGHFTHIFLLDASEAIEPEVL 180
           DYN D +CF CP LDE HKYKII STFMSSFRL  KG A GHF+HIFLLDAS AIEPE  
Sbjct: 596 DYNRDQECFACPALDELHKYKIIFSTFMSSFRLRTKGSAPGHFSHIFLLDASAAIEPE-- 655

Query: 181 VLVPLTKFSIDTTNVIVTGKTWKQPCWVRSKL 193
           VLVPLTKF+ID TNVIVTG+   QP WVRS++
Sbjct: 656 VLVPLTKFAIDATNVIVTGQRGNQPYWVRSQI 685

The following BLAST results are available for this feature:

BLAST of Bhi12G001004 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GYD9\|SDE3_ARATH	4.2e-22	32.60	Probable RNA helicase SDE3 OS=Arabidopsis thaliana OX=3702 GN=SDE3 PE=1 SV=1	[more]
sp\|Q0V8H6\|MOV10_BOVIN	2.0e-16	33.13	Putative helicase MOV-10 OS=Bos taurus OX=9913 GN=MOV10 PE=2 SV=1	[more]
sp\|Q5ZKD7\|MOV10_CHICK	5.8e-16	29.11	Putative helicase MOV-10 OS=Gallus gallus OX=9031 GN=MOV10 PE=2 SV=1	[more]
sp\|Q9BXT6\|M10L1_HUMAN	2.9e-15	30.57	RNA helicase Mov10l1 OS=Homo sapiens OX=9606 GN=MOV10L1 PE=2 SV=1	[more]
sp\|Q9HCE1\|MOV10_HUMAN	2.9e-15	32.50	Putative helicase MOV-10 OS=Homo sapiens OX=9606 GN=MOV10 PE=1 SV=2	[more]

BLAST of Bhi12G001004 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05460.1	2.3e-23	32.60	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

BLAST of Bhi12G001004 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4HSY1\|A0A2I4HSY1_9ROSI	1.2e-47	49.27	probable RNA helicase SDE3 OS=Juglans regia OX=51240 GN=LOC109021150 PE=4 SV=1	[more]
tr\|A0A2P6S840\|A0A2P6S840_ROSCH	1.4e-46	49.50	Putative RNA helicase SDE3, P-loop containing nucleoside triphosphate hydrolase ...	[more]
tr\|A0A2P6S815\|A0A2P6S815_ROSCH	1.8e-46	48.54	Putative RNA helicase SDE3, P-loop containing nucleoside triphosphate hydrolase ...	[more]
tr\|A0A2P6R4S1\|A0A2P6R4S1_ROSCH	1.5e-45	50.00	Putative RNA helicase SDE3, P-loop containing nucleoside triphosphate hydrolase ...	[more]
tr\|A0A068U9J3\|A0A068U9J3_COFCA	9.9e-45	49.74	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00019651001 PE=4 ...	[more]

BLAST of Bhi12G001004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022993138.1	2.4e-74	68.87	probable RNA helicase SDE3 isoform X2 [Cucurbita maxima] >XP_022993139.1 probabl...	[more]
XP_022993134.1	2.4e-74	68.87	probable RNA helicase SDE3 isoform X1 [Cucurbita maxima] >XP_022993136.1 probabl...	[more]
XP_022993142.1	2.4e-74	68.87	probable RNA helicase SDE3 isoform X3 [Cucurbita maxima]	[more]
XP_022938441.1	8.4e-72	67.45	probable RNA helicase SDE3 isoform X3 [Cucurbita moschata]	[more]
XP_022938442.1	8.4e-72	67.45	probable RNA helicase SDE3 isoform X4 [Cucurbita moschata]	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M001004	Bhi12M001004	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..195 e-value: 3.3E-15 score: 58.2
None	No IPR available	PANTHER	PTHR10887:SF419	RNA HELICASE MOV10L1	coord: 11..177
None	No IPR available	PANTHER	PTHR10887	DNA2/NAM7 HELICASE FAMILY	coord: 11..177

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G001004	Cucumber (Gy14) v2	cgybwgoB434
Bhi12G001004	Cucurbita maxima (Rimu)	cmawgoB0373
Bhi12G001004	Cucurbita maxima (Rimu)	cmawgoB0827
Bhi12G001004	Cucurbita moschata (Rifu)	cmowgoB0367
Bhi12G001004	Cucurbita moschata (Rifu)	cmowgoB0822
Bhi12G001004	Cucurbita pepo (Zucchini)	cpewgoB0218
Bhi12G001004	Cucurbita pepo (Zucchini)	cpewgoB0490
Bhi12G001004	Cucumber (Chinese Long) v3	cucwgoB468
Bhi12G001004	Bottle gourd (USVL1VR-Ls)	lsiwgoB009
Bhi12G001004	Melon (DHL92) v3.6.1	medwgoB015
Bhi12G001004	Melon (DHL92) v3.5.1	mewgoB017
Bhi12G001004	Watermelon (Charleston Gray)	wcgwgoB194
Bhi12G001004	Watermelon (97103) v2	wgowmbB057
Bhi12G001004	Watermelon (97103) v1	wgowmB078
Bhi12G001004	Silver-seed gourd	carwgoB0580
Bhi12G001004	Silver-seed gourd	carwgoB0962