Bhi12G000828 (gene) Wax gourd

Overview
NameBhi12G000828
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr12 : 28651246 .. 28651398 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTTGAAGGCTTCAGAATGGGTTTTTCGTATTCCTGATTTAAACCAAATTTACATACCGAAGAGAAGAAGATCTTCCGGTGCCGGAAATAAAGAAGAACCTAAGATTGAAACCGATTTTCCAATGTCTATGTCAGAGGCTGCGGATATTCTG

mRNA sequence

AGGTTGAAGGCTTCAGAATGGGTTTTTCGTATTCCTGATTTAAACCAAATTTACATACCGAAGAGAAGAAGATCTTCCGGTGCCGGAAATAAAGAAGAACCTAAGATTGAAACCGATTTTCCAATGTCTATGTCAGAGGCTGCGGATATTCTG

Coding sequence (CDS)

AGGTTGAAGGCTTCAGAATGGGTTTTTCGTATTCCTGATTTAAACCAAATTTACATACCGAAGAGAAGAAGATCTTCCGGTGCCGGAAATAAAGAAGAACCTAAGATTGAAACCGATTTTCCAATGTCTATGTCAGAGGCTGCGGATATTCTG

Protein sequence

RLKASEWVFRIPDLNQIYIPKRRRSSGAGNKEEPKIETDFPMSMSEAADIL
Homology
[Close]
BLAST of Bhi12G000828 vs. TrEMBL
Match: tr|A0A1S4E600|A0A1S4E600_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504562 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-05
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 10 RIPDLNQIYIPKRRR--SSGAGNKEEPKIETDFPMSMSEAADIL 52
          ++PDLN IYIP++RR  SSGAG KE    ET+ P+SM+EAA IL
Sbjct: 16 QLPDLNDIYIPRKRRGSSSGAGKKERSMTETELPLSMAEAASIL 59

[Close]
BLAST of Bhi12G000828 vs. TrEMBL
Match: tr|A0A0A0KP87|A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.3e-05
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 10 RIPDLNQIYIPKRRR--SSGAGNKEEPKIETDFPMSMSEAADIL 52
          ++PDLN +Y+P++RR  SSG G KE+   ET+ P+SM+EAA IL
Sbjct: 16 QLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASIL 59

[Close]
BLAST of Bhi12G000828 vs. TrEMBL
Match: tr|A0A0A0KUX9|A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.3e-05
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 10 RIPDLNQIYIPKRRR--SSGAGNKEEPKIETDFPMSMSEAADIL 52
          ++PDLN +Y+P++RR  SSG G KE+   ET+ P+SM+EAA IL
Sbjct: 14 QLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASIL 57

[Close]
BLAST of Bhi12G000828 vs. NCBI nr
Match: XP_016903400.1 (PREDICTED: putative B3 domain-containing protein At3g24850 [Cucumis melo])

HSP 1 Score: 55.8 bits (133), Expect = 4.8e-05
Identity = 27/44 (61.36%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 10 RIPDLNQIYIPKRRR--SSGAGNKEEPKIETDFPMSMSEAADIL 52
          ++PDLN IYIP++RR  SSGAG KE    ET+ P+SM+EAA IL
Sbjct: 16 QLPDLNDIYIPRKRRGSSSGAGKKERSMTETELPLSMAEAASIL 59

[Close]
BLAST of Bhi12G000828 vs. NCBI nr
Match: XP_011655441.1 (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus] >KGN51435.1 hypothetical protein Csa_5G544060 [Cucumis sativus])

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-04
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 10 RIPDLNQIYIPKRRR--SSGAGNKEEPKIETDFPMSMSEAADIL 52
          ++PDLN +Y+P++RR  SSG G KE+   ET+ P+SM+EAA IL
Sbjct: 16 QLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASIL 59

[Close]
BLAST of Bhi12G000828 vs. NCBI nr
Match: KGN51496.1 (hypothetical protein Csa_5G570410 [Cucumis sativus])

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-04
Identity = 24/44 (54.55%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 10 RIPDLNQIYIPKRRR--SSGAGNKEEPKIETDFPMSMSEAADIL 52
          ++PDLN +Y+P++RR  SSG G KE+   ET+ P+SM+EAA IL
Sbjct: 14 QLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASIL 57

The following BLAST results are available for this feature:
BLAST of Bhi12G000828 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G000828 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G000828 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E600|A0A1S4E600_CUCME3.2e-0561.36putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KP87|A0A0A0KP87_CUCSA9.3e-0554.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1[more]
tr|A0A0A0KUX9|A0A0A0KUX9_CUCSA9.3e-0554.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570410 PE=4 SV=1[more]
BLAST of Bhi12G000828 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903400.14.8e-0561.36PREDICTED: putative B3 domain-containing protein At3g24850 [Cucumis melo][more]
XP_011655441.11.4e-0454.55PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus] >KGN514... [more]
KGN51496.11.4e-0454.55hypothetical protein Csa_5G570410 [Cucumis sativus][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000828Bhi12M000828mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..51