Bhi12G000641 (gene) Wax gourd

NameBhi12G000641
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr12 : 21741192 .. 21741701 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTGTAGGTACTCAAAGGGCAAGGGGAAGCCGGCGGGCAGAGACGACGGAGCGAGAAACGCCGTGAAGACGATGACCACGACCACCACAGACGGCGGATCAGCGGAGTTGAAATACATGAAAAGAATTCTAACCGATGAGGACAATTCAAACTCGATGATCTCACCCTCCAATAACAACCCATTGAAACAACCCTCAATCTTCCACCACCTAGAAACCACCGCCAGCGCTGCCGCGGAGGACGAGCAATGGGACAGGCACGTGCGAAGAGGAATGGAGAGAGTGAAGAAGAAGTACTTCCCACGTGGGAAATGTGAAGTAGTGAAAGATATGAATGCTTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACGTTTTGGATTCCCTTTTACAAGAAACTGTTGCCCTAATTTCTTCACTACCAAAACGCTCTCGTTTTCCTTTGCATTTCATTTCATCTCAAAACATTCCTATTTTCTAA

mRNA sequence

CCGTGTAGGTACTCAAAGGGCAAGGGGAAGCCGGCGGGCAGAGACGACGGAGCGAGAAACGCCGTGAAGACGATGACCACGACCACCACAGACGGCGGATCAGCGGAGTTGAAATACATGAAAAGAATTCTAACCGATGAGGACAATTCAAACTCGATGATCTCACCCTCCAATAACAACCCATTGAAACAACCCTCAATCTTCCACCACCTAGAAACCACCGCCAGCGCTGCCGCGGAGGACGAGCAATGGGACAGGCACGTGCGAAGAGGAATGGAGAGAGTGAAGAAGAAGTACTTCCCACGTGGGAAATGTGAAGTAGTGAAAGATATGAATGCTTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACGTTTTGGATTCCCTTTTACAAGAAACTGTTGCCCTAATTTCTTCACTACCAAAACGCTCTCGTTTTCCTTTGCATTTCATTTCATCTCAAAACATTCCTATTTTCTAA

Coding sequence (CDS)

CCGTGTAGGTACTCAAAGGGCAAGGGGAAGCCGGCGGGCAGAGACGACGGAGCGAGAAACGCCGTGAAGACGATGACCACGACCACCACAGACGGCGGATCAGCGGAGTTGAAATACATGAAAAGAATTCTAACCGATGAGGACAATTCAAACTCGATGATCTCACCCTCCAATAACAACCCATTGAAACAACCCTCAATCTTCCACCACCTAGAAACCACCGCCAGCGCTGCCGCGGAGGACGAGCAATGGGACAGGCACGTGCGAAGAGGAATGGAGAGAGTGAAGAAGAAGTACTTCCCACGTGGGAAATGTGAAGTAGTGAAAGATATGAATGCTTTAATAATCAACAAGAGAATGGCGGAGGAAATAGAAGGGATTGTGAAGGTGGTTGAGCTTCACGTTTTGGATTCCCTTTTACAAGAAACTGTTGCCCTAATTTCTTCACTACCAAAACGCTCTCGTTTTCCTTTGCATTTCATTTCATCTCAAAACATTCCTATTTTCTAA

Protein sequence

PCRYSKGKGKPAGRDDGARNAVKTMTTTTTDGGSAELKYMKRILTDEDNSNSMISPSNNNPLKQPSIFHHLETTASAAAEDEQWDRHVRRGMERVKKKYFPRGKCEVVKDMNALIINKRMAEEIEGIVKVVELHVLDSLLQETVALISSLPKRSRFPLHFISSQNIPIF
BLAST of Bhi12G000641 vs. NCBI nr
Match: XP_022958521.1 (uncharacterized protein LOC111459727 [Cucurbita moschata])

HSP 1 Score: 54.7 bits (130), Expect = 3.6e-04
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 0

Query: 89  RRGMERVKKKYFPRGKCEVVKDMNALI---INK-RMAEEIEGIVKVVELHVLDSLLQETV 148
           R  M  +K     R KC V+KD+++LI   + K +   E+EG+V+  E H+LDSLL+ET 
Sbjct: 303 RTRMMMMKGWELARAKCHVLKDIDSLIDKDLGKWKKVLELEGVVRTFEFHILDSLLRETT 362

Query: 149 ALISSLPKRSRFPLH 160
           A I SL KR RF  H
Sbjct: 363 ATIMSLHKRCRFAPH 377

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022958521.13.6e-0445.33uncharacterized protein LOC111459727 [Cucurbita moschata][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000641Bhi12M000641mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None