Bhi12G000529 (gene) Wax gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCGCCTTCCTGAGCAACCAAATCAAATCTTCCCAAAGTCGAGGAATCAAAGTCCTCCTCTCCATCGGTGGCGCGCCAGGGAGTTATTCACTTCCTCCGCTGACGATGCAAGACAAGTCGCTAATTTCATTGGAACAACTACCTTGGCGGTCATCGAGCTCACGACCCCTCGGTAATTGCGTTTTGGAGGTGTTATTTCGATATCGAAGCTGGCTCTGGCCAATTCTGGACGTACTGGCTCAACAACTGAAGAACAAGGCCGAGTCATTCTCGCCGCCGCACCACAGTGTCCGATCCCCACGCGCACTTAGACGCCGCTATTAAAACTGGTTTGTTTGATTCTTTGGGTTCAATTCTACAACAAACCGCCATGTATGTATGCAAATGGAAACACCAACAATCTCCTGAATTCTTGGAACCGGTGGACGGGGTTTCCGGTTGGAAGCTGTACATGGGGCTACCAGCGGCACCTGCACCACGCCCTAGCGGCGGCTTTATTTCCGGACCAACGTGCTAA ATGGTGCGCCTTCCTGAGCAACCAAATCAAATCTTCCCAAAGTCGAGGAATCAAAGTCCTCCTCTCCATCGGTGGCGCGCCAGGGAGTTATTCACTTCCTCCGCTGACGATGCAAGACAAGTCGCTAATTTCATTGGAACAACTACCTTGGCGGTCATCGAGCTCACGACCCCTCGAACAAGGCCGAGTCATTCTCGCCGCCGCACCACAGTGTCCGATCCCCACGCGCACTTAGACGCCGCTATTAAAACTGGTTTGTTTGATTCTTTGGGTTCAATTCTACAACAAACCGCCATGTATGTATGCAAATGGAAACACCAACAATCTCCTGAATTCTTGGAACCGGTGGACGGGGTTTCCGGTTGGAAGCTGTACATGGGGCTACCAGCGGCACCTGCACCACGCCCTAGCGGCGGCTTTATTTCCGGACCAACGTGCTAA ATGGTGCGCCTTCCTGAGCAACCAAATCAAATCTTCCCAAAGTCGAGGAATCAAAGTCCTCCTCTCCATCGGTGGCGCGCCAGGGAGTTATTCACTTCCTCCGCTGACGATGCAAGACAAGTCGCTAATTTCATTGGAACAACTACCTTGGCGGTCATCGAGCTCACGACCCCTCGAACAAGGCCGAGTCATTCTCGCCGCCGCACCACAGTGTCCGATCCCCACGCGCACTTAGACGCCGCTATTAAAACTGGTTTGTTTGATTCTTTGGGTTCAATTCTACAACAAACCGCCATGTATGTATGCAAATGGAAACACCAACAATCTCCTGAATTCTTGGAACCGGTGGACGGGGTTTCCGGTTGGAAGCTGTACATGGGGCTACCAGCGGCACCTGCACCACGCCCTAGCGGCGGCTTTATTTCCGGACCAACGTGCTAA MVRLPEQPNQIFPKSRNQSPPLHRWRARELFTSSADDARQVANFIGTTTLAVIELTTPRTRPSHSRRRTTVSDPHAHLDAAIKTGLFDSLGSILQQTAMYVCKWKHQQSPEFLEPVDGVSGWKLYMGLPAAPAPRPSGGFISGPTC
BLAST of Bhi12G000529 vs. Swiss-Prot
Match: sp|P17541|CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus OX=3659 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.2e-05 Identity = 49/148 (33.11%), Postives = 62/148 (41.89%), Query Frame = 0
BLAST of Bhi12G000529 vs. TrEMBL
Match: tr|Q39657|Q39657_CUCSA (ORF 3 OS=Cucumis sativus OX=3659 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.6e-04 Identity = 34/78 (43.59%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Bhi12G000529 vs. TrEMBL
Match: tr|Q9M544|Q9M544_CUCME (Chitinase 1 OS=Cucumis melo OX=3656 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.9e-04 Identity = 50/148 (33.78%), Postives = 63/148 (42.57%), Query Frame = 0
BLAST of Bhi12G000529 vs. TrEMBL
Match: tr|A0A1S3AUB6|A0A1S3AUB6_CUCME (acidic endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103482937 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 7.8e-04 Identity = 34/71 (47.89%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Bhi12G000529 vs. NCBI nr
Match: AAC37396.1 (ORF 3 [Cucumis sativus]) HSP 1 Score: 53.5 bits (127), Expect = 6.9e-04 Identity = 34/78 (43.59%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Bhi12G000529 vs. NCBI nr
Match: NP_001315368.1 (acidic endochitinase precursor [Cucumis melo] >AAF64474.1 chitinase 1 [Cucumis melo]) HSP 1 Score: 53.1 bits (126), Expect = 9.0e-04 Identity = 50/148 (33.78%), Postives = 63/148 (42.57%), Query Frame = 0
The following BLAST results are available for this feature:
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |