Bhi12G000453 (gene) Wax gourd

Overview
NameBhi12G000453
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr12 : 16084453 .. 16084610 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAAGGACAAGGTTTGTGGAATTGCCTTCGTCCATGTTCCAACGACTATAAGAGTTTGTCATGTTATGTGGATTGCGGTGCACAGAATAAAGGAACTGGATCTTGTATTCCTAAACGACCTGGTTCTGATGAATATGTTTGTTGTTGTACTGGTTGA

mRNA sequence

GTGAAGGACAAGGTTTGTGGAATTGCCTTCGTCCATGTTCCAACGACTATAAGAGTTTGTCATGTTATGTGGATTGCGGTGCACAGAATAAAGGAACTGGATCTTGTATTCCTAAACGACCTGGTTCTGATGAATATGTTTGTTGTTGTACTGGTTGA

Coding sequence (CDS)

GTGAAGGACAAGGTTTGTGGAATTGCCTTCGTCCATGTTCCAACGACTATAAGAGTTTGTCATGTTATGTGGATTGCGGTGCACAGAATAAAGGAACTGGATCTTGTATTCCTAAACGACCTGGTTCTGATGAATATGTTTGTTGTTGTACTGGTTGA

Protein sequence

EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPGSDEYVCCCTG
Homology
[Close]
BLAST of Bhi12G000453 vs. TrEMBL
Match: tr|A0A0A0L1R8|A0A0A0L1R8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-07
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPG-SDEYVCCC 50
          EG  LWNC+ PCSN+   + C   C  Q++G G C+PK PG SD  VCCC
Sbjct: 25 EGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCVPKLPGISDMKVCCC 74

[Close]
BLAST of Bhi12G000453 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_4G339000 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-07
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0 

Query: 1  EGQGLWNCLRPCSNDYKSLSCYVDCGAQNKGTGSCIPKRPG-SDEYVCCC 50
          EG  LWNC+ PCSN+   + C   C  Q++G G C+PK PG SD  VCCC
Sbjct: 25 EGDDLWNCVIPCSNNNGDILCNTACIEQDEGAGFCVPKLPGISDMKVCCC 74

The following BLAST results are available for this feature:
BLAST of Bhi12G000453 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G000453 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G000453 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L1R8|A0A0A0L1R8_CUCSA3.4e-0752.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1[more]
BLAST of Bhi12G000453 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54497.15.2e-0752.00hypothetical protein Csa_4G339000 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000453Bhi12M000453mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi12G000453MELO3C033993.2Melon (DHL92) v3.6.1medwgoB014
Bhi12G000453Carg08407Silver-seed gourdcarwgoB0831
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G000453Cucumber (Gy14) v1cgywgoB239
Bhi12G000453Cucumber (Gy14) v1cgywgoB242
Bhi12G000453Cucumber (Gy14) v2cgybwgoB414
Bhi12G000453Cucumber (Gy14) v2cgybwgoB432
Bhi12G000453Cucurbita maxima (Rimu)cmawgoB0370
Bhi12G000453Cucurbita maxima (Rimu)cmawgoB0375
Bhi12G000453Cucurbita maxima (Rimu)cmawgoB0717
Bhi12G000453Cucurbita maxima (Rimu)cmawgoB0723
Bhi12G000453Cucurbita moschata (Rifu)cmowgoB0363
Bhi12G000453Cucurbita moschata (Rifu)cmowgoB0369
Bhi12G000453Cucurbita moschata (Rifu)cmowgoB0708
Bhi12G000453Cucurbita pepo (Zucchini)cpewgoB0219
Bhi12G000453Cucurbita pepo (Zucchini)cpewgoB0232
Bhi12G000453Cucurbita pepo (Zucchini)cpewgoB0921
Bhi12G000453Wild cucumber (PI 183967)cpiwgoB440
Bhi12G000453Wild cucumber (PI 183967)cpiwgoB459
Bhi12G000453Cucumber (Chinese Long) v3cucwgoB449
Bhi12G000453Cucumber (Chinese Long) v3cucwgoB467
Bhi12G000453Cucumber (Chinese Long) v2cuwgoB438
Bhi12G000453Cucumber (Chinese Long) v2cuwgoB455
Bhi12G000453Bottle gourd (USVL1VR-Ls)lsiwgoB010
Bhi12G000453Bottle gourd (USVL1VR-Ls)lsiwgoB031
Bhi12G000453Melon (DHL92) v3.6.1medwgoB010
Bhi12G000453Melon (DHL92) v3.5.1mewgoB011
Bhi12G000453Melon (DHL92) v3.5.1mewgoB014
Bhi12G000453Melon (DHL92) v3.5.1mewgoB016
Bhi12G000453Watermelon (Charleston Gray)wcgwgoB193
Bhi12G000453Watermelon (Charleston Gray)wcgwgoB203
Bhi12G000453Watermelon (97103) v2wgowmbB056
Bhi12G000453Watermelon (97103) v2wgowmbB059
Bhi12G000453Watermelon (97103) v2wgowmbB065
Bhi12G000453Watermelon (97103) v1wgowmB081
Bhi12G000453Watermelon (97103) v1wgowmB089
Bhi12G000453Silver-seed gourdcarwgoB0651
Bhi12G000453Silver-seed gourdcarwgoB0653
Bhi12G000453Silver-seed gourdcarwgoB0910