Bhi12G000327 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G000327
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	blue copper protein-like
Location	chr12 : 11176419 .. 11176643 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCTCCACTTCTCATCTCTTTGTCTTCCTCTCCATTGCGGCGGTCGCTTTTGCCCCCTCCGCTCTGGCCACCAATTACACCGTCGGAGATGATGCTGGTTGGAATGTTGGTGTCAATTATACATTGTGGGCTAATGACAAAATGTTCAACGTCGGTGATATTCTCAGTAAGTCGTTTTATTCAATTCACTTAGTTATTCACGTTTTTTTATTGTGTTAA

mRNA sequence

ATGGCCATCTCCACTTCTCATCTCTTTGTCTTCCTCTCCATTGCGGCGGTCGCTTTTGCCCCCTCCGCTCTGGCCACCAATTACACCGTCGGAGATGATGCTGGTTGGAATGTTGGTGTCAATTATACATTGTGGGCTAATGACAAAATGTTCAACGTCGGTGATATTCTCAGTAAGTCGTTTTATTCAATTCACTTAGTTATTCACGTTTTTTTATTGTGTTAA

Coding sequence (CDS)

ATGGCCATCTCCACTTCTCATCTCTTTGTCTTCCTCTCCATTGCGGCGGTCGCTTTTGCCCCCTCCGCTCTGGCCACCAATTACACCGTCGGAGATGATGCTGGTTGGAATGTTGGTGTCAATTATACATTGTGGGCTAATGACAAAATGTTCAACGTCGGTGATATTCTCAGTAAGTCGTTTTATTCAATTCACTTAGTTATTCACGTTTTTTTATTGTGTTAA

Protein sequence

MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDILSKSFYSIHLVIHVFLLC

Homology

[Close]

BLAST of Bhi12G000327 vs. Swiss-Prot
Match: sp|Q41001|BCP_PEA (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.7e-06
Identity = 28/57 (49.12%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 1  MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          MA S + +  FL +A +  A  +LAT YTVGD +GW +G +Y+ WA+DK F VGD L
Sbjct: 1  MAFSNALVLCFL-LAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSL 56

[Close]

BLAST of Bhi12G000327 vs. TAIR10
Match: AT3G60270.1 (Cupredoxin superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.0e-06
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0


Query: 21 PSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDILSKSFYSIHLV 68
          P+  A  + VGD+ GW +GV YT W ++K F VGD L   +   H V
Sbjct: 19 PAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPSHSV 65

[Close]

BLAST of Bhi12G000327 vs. TAIR10
Match: AT4G12880.1 (early nodulin-like protein 19)

HSP 1 Score: 47.0 bits (110), Expect = 5.9e-06
Identity = 25/53 (47.17%), Postives = 27/53 (50.94%), Query Frame = 0


Query: 10 VFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDILSKSFY 63
          V L+    A  P   A  Y VGD   WN  +NYTLWA  K F VGD L   FY
Sbjct: 11 VVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFY 63

[Close]

BLAST of Bhi12G000327 vs. TAIR10
Match: AT5G15350.1 (early nodulin-like protein 17)

HSP 1 Score: 43.5 bits (101), Expect = 6.5e-05
Identity = 21/48 (43.75%), Postives = 27/48 (56.25%), Query Frame = 0


Query: 10 VFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          V L+    A  P   A  YTVG++  WN  +NYT+WA  K F +GD L
Sbjct: 11 VVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWL 58

[Close]

BLAST of Bhi12G000327 vs. TAIR10
Match: AT2G44790.1 (uclacyanin 2)

HSP 1 Score: 41.2 bits (95), Expect = 3.2e-04
Identity = 21/54 (38.89%), Postives = 28/54 (51.85%), Query Frame = 0


Query: 14 IAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDILSKSFYSIHLV 68
          +  +   P A+A  YT+     W  GV+Y+ WA  K F VGDIL   + S H V
Sbjct: 18 LLVLTIVPGAVAVTYTI----EWTTGVDYSGWATGKTFRVGDILEFKYGSSHTV 67

[Close]

BLAST of Bhi12G000327 vs. TAIR10
Match: AT3G01070.1 (early nodulin-like protein 16)

HSP 1 Score: 41.2 bits (95), Expect = 3.2e-04
Identity = 22/51 (43.14%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 10 VFLSIAAVAF---APSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          V ++ A +AF   A +  A  +TVGD+  WN  +NYT+WA DK F + D L
Sbjct: 6  VLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWL 56

[Close]

BLAST of Bhi12G000327 vs. TrEMBL
Match: tr|A0A1S3ATX0|A0A1S3ATX0_CUCME (mavicyanin-like OS=Cucumis melo OX=3656 GN=LOC103482677 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-16
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          MAISTSHLFV LS A V  APSALATNYTVGDDAGW++ VNYT+WA  KMFNVGD+L
Sbjct: 1  MAISTSHLFVLLSFAVVMSAPSALATNYTVGDDAGWSINVNYTVWAQGKMFNVGDML 57

[Close]

BLAST of Bhi12G000327 vs. TrEMBL
Match: tr|A0A0A0KKF3|A0A0A0KKF3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157340 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0


Query: 14 IAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          +A V +APSALATNYTVGDDAGW++ VNYTLWA  KMFNVGD+L
Sbjct: 1  MAVVMYAPSALATNYTVGDDAGWSINVNYTLWAQGKMFNVGDML 44

[Close]

BLAST of Bhi12G000327 vs. TrEMBL
Match: tr|A0A067L6H1|A0A067L6H1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02694 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-08
Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 4  STSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDILSKSFYS 63
          S S+ FV  +I A+     A+AT+Y VGDD GW VGVNYT WA DK+F VGD L   + S
Sbjct: 3  SKSYQFVCFAIVAIILPTVAMATDYVVGDDEGWKVGVNYTEWAKDKVFYVGDRLVFQYQS 62

Query: 64 IHLVIHV 71
           H V  V
Sbjct: 63 PHNVYKV 69

[Close]

BLAST of Bhi12G000327 vs. TrEMBL
Match: tr|A0A022RJF7|A0A022RJF7_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a021699mg PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-07
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 9  FVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          F+   I A+A AP+A AT+YTVGDD+GW +GVNYT WA  K F VGD +
Sbjct: 7  FLITMIIALAVAPAAFATDYTVGDDSGWKLGVNYTEWAEGKNFRVGDTI 55

[Close]

BLAST of Bhi12G000327 vs. TrEMBL
Match: tr|A0A022RLD2|A0A022RLD2_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a020589mg PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-07
Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 0


Query: 4  STSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDILSKSFY- 63
          S S  F+ + I A+A AP+A AT+Y VGD++GW +GVNYT WA  K F VGD ++  +  
Sbjct: 3  SRSSAFLIMMIIALAVAPAAFATDYMVGDNSGWKLGVNYTTWAEGKSFRVGDTITFMYAP 62

Query: 64 SIHLVIHV 71
           +H V+ V
Sbjct: 63 GVHNVMKV 70

[Close]

BLAST of Bhi12G000327 vs. NCBI nr
Match: XP_004147603.1 (PREDICTED: mavicyanin-like [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 6.1e-17
Identity = 46/57 (80.70%), Postives = 51/57 (89.47%), Query Frame = 0


Query: 1  MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          MAISTSHLFV LS+A V +APSALATNYTVGDDAGW++ VNYTLWA  KMFNVGD+L
Sbjct: 1  MAISTSHLFVLLSMAVVMYAPSALATNYTVGDDAGWSINVNYTLWAQGKMFNVGDML 57

[Close]

BLAST of Bhi12G000327 vs. NCBI nr
Match: XP_008437169.1 (PREDICTED: mavicyanin-like [Cucumis melo])

HSP 1 Score: 92.4 bits (228), Expect = 6.8e-16
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          MAISTSHLFV LS A V  APSALATNYTVGDDAGW++ VNYT+WA  KMFNVGD+L
Sbjct: 1  MAISTSHLFVLLSFAVVMSAPSALATNYTVGDDAGWSINVNYTVWAQGKMFNVGDML 57

[Close]

BLAST of Bhi12G000327 vs. NCBI nr
Match: XP_022958079.1 (stellacyanin-like [Cucurbita moschata])

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15
Identity = 48/57 (84.21%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1  MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          MAISTSHLFVFLSIAA+ FAPSALATNYTVGDDAGW VGVNYT WA +K F VGD L
Sbjct: 1  MAISTSHLFVFLSIAAI-FAPSALATNYTVGDDAGWKVGVNYTEWAQNKTFYVGDNL 56

[Close]

BLAST of Bhi12G000327 vs. NCBI nr
Match: XP_023534759.1 (stellacyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-15
Identity = 48/57 (84.21%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1  MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          MAISTSHLFVFLSIAA+ FAPSALATNYTVGDDAGW VGVNYT WA +K F VGD L
Sbjct: 1  MAISTSHLFVFLSIAAI-FAPSALATNYTVGDDAGWKVGVNYTEWAQNKTFYVGDNL 56

[Close]

BLAST of Bhi12G000327 vs. NCBI nr
Match: XP_022996052.1 (stellacyanin-like [Cucurbita maxima])

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-15
Identity = 48/57 (84.21%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 1  MAISTSHLFVFLSIAAVAFAPSALATNYTVGDDAGWNVGVNYTLWANDKMFNVGDIL 58
          MAISTSHLFVFLSIAA+ FAPSALATNYTVGDDAGW VGVNYT WA +K F VGD L
Sbjct: 1  MAISTSHLFVFLSIAAI-FAPSALATNYTVGDDAGWKVGVNYTDWAQNKTFYVGDNL 56

The following BLAST results are available for this feature:

BLAST of Bhi12G000327 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q41001\|BCP_PEA	5.7e-06	49.12	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of Bhi12G000327 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60270.1	2.0e-06	42.55	Cupredoxin superfamily protein	[more]
AT4G12880.1	5.9e-06	47.17	early nodulin-like protein 19	[more]
AT5G15350.1	6.5e-05	43.75	early nodulin-like protein 17	[more]
AT2G44790.1	3.2e-04	38.89	uclacyanin 2	[more]
AT3G01070.1	3.2e-04	43.14	early nodulin-like protein 16	[more]

BLAST of Bhi12G000327 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3ATX0\|A0A1S3ATX0_CUCME	4.5e-16	78.95	mavicyanin-like OS=Cucumis melo OX=3656 GN=LOC103482677 PE=4 SV=1	[more]
tr\|A0A0A0KKF3\|A0A0A0KKF3_CUCSA	2.5e-11	77.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157340 PE=4 SV=1	[more]
tr\|A0A067L6H1\|A0A067L6H1_JATCU	4.5e-08	52.24	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02694 PE=4 SV=1	[more]
tr\|A0A022RJF7\|A0A022RJF7_ERYGU	2.2e-07	59.18	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a021699mg PE...	[more]
tr\|A0A022RLD2\|A0A022RLD2_ERYGU	2.9e-07	47.06	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a020589mg PE...	[more]

BLAST of Bhi12G000327 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147603.1	6.1e-17	80.70	PREDICTED: mavicyanin-like [Cucumis sativus]	[more]
XP_008437169.1	6.8e-16	78.95	PREDICTED: mavicyanin-like [Cucumis melo]	[more]
XP_022958079.1	1.5e-15	84.21	stellacyanin-like [Cucurbita moschata]	[more]
XP_023534759.1	1.5e-15	84.21	stellacyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022996052.1	2.0e-15	84.21	stellacyanin-like [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR039391	Phytocyanin
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M000327	Bhi12M000327	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 24..71 e-value: 6.8E-9 score: 37.7
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 25..62
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 36..69 e-value: 1.3E-4 score: 21.8
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 26..74 score: 13.008
None	No IPR available	PANTHER	PTHR33021:SF152	SUBFAMILY NOT NAMED	coord: 10..70
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 10..70

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G000327	Cucumber (Gy14) v1	cgywgoB509
Bhi12G000327	Cucumber (Gy14) v1	cgywgoB604
Bhi12G000327	Cucumber (Gy14) v1	cgywgoB649
Bhi12G000327	Cucumber (Gy14) v2	cgybwgoB246
Bhi12G000327	Cucumber (Gy14) v2	cgybwgoB414
Bhi12G000327	Cucurbita maxima (Rimu)	cmawgoB0375
Bhi12G000327	Cucurbita maxima (Rimu)	cmawgoB0712
Bhi12G000327	Cucurbita maxima (Rimu)	cmawgoB0721
Bhi12G000327	Cucurbita maxima (Rimu)	cmawgoB0998
Bhi12G000327	Cucurbita moschata (Rifu)	cmowgoB0369
Bhi12G000327	Cucurbita moschata (Rifu)	cmowgoB0705
Bhi12G000327	Cucurbita moschata (Rifu)	cmowgoB0714
Bhi12G000327	Cucurbita moschata (Rifu)	cmowgoB0996
Bhi12G000327	Cucurbita pepo (Zucchini)	cpewgoB0219
Bhi12G000327	Cucurbita pepo (Zucchini)	cpewgoB0912
Bhi12G000327	Cucurbita pepo (Zucchini)	cpewgoB1101
Bhi12G000327	Wild cucumber (PI 183967)	cpiwgoB257
Bhi12G000327	Wild cucumber (PI 183967)	cpiwgoB440
Bhi12G000327	Cucumber (Chinese Long) v3	cucwgoB260
Bhi12G000327	Cucumber (Chinese Long) v3	cucwgoB449
Bhi12G000327	Cucumber (Chinese Long) v2	cuwgoB257
Bhi12G000327	Cucumber (Chinese Long) v2	cuwgoB438
Bhi12G000327	Bottle gourd (USVL1VR-Ls)	lsiwgoB010
Bhi12G000327	Bottle gourd (USVL1VR-Ls)	lsiwgoB541
Bhi12G000327	Melon (DHL92) v3.6.1	medwgoB010
Bhi12G000327	Melon (DHL92) v3.6.1	medwgoB521
Bhi12G000327	Melon (DHL92) v3.5.1	mewgoB014
Bhi12G000327	Melon (DHL92) v3.5.1	mewgoB515
Bhi12G000327	Watermelon (Charleston Gray)	wcgwgoB109
Bhi12G000327	Watermelon (Charleston Gray)	wcgwgoB193
Bhi12G000327	Watermelon (97103) v2	wgowmbB056
Bhi12G000327	Watermelon (97103) v2	wgowmbB068
Bhi12G000327	Watermelon (97103) v1	wgowmB057
Bhi12G000327	Watermelon (97103) v1	wgowmB077
Bhi12G000327	Silver-seed gourd	carwgoB1011
Bhi12G000327	Silver-seed gourd	carwgoB1060
Bhi12G000327	Silver-seed gourd	carwgoB1063
Bhi12G000327	Silver-seed gourd	carwgoB1080