Bhi12G000205 (gene) Wax gourd

Overview
NameBhi12G000205
Typegene
OrganismBenincasa hispida (Wax gourd)
Descriptionmucin-17 isoform X1
Locationchr12 : 6802356 .. 6802538 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCGAAACTGGAGGGAGCCTCTTCCTGGTGCTCGAAATGCTCATCTCTTGTCTCAGCACCGCCGTGGTCATAGCTTCACTGGAATCTCTACGAATTTCGACGACAATCTAGATTTCTTCTCCAAGAATCGTTGGAGTCTCTCCGTTGCTGCTTCCGATGACTCCTCTGATGGATTATGA

mRNA sequence

ATGAACCGAAACTGGAGGGAGCCTCTTCCTGGTGCTCGAAATGCTCATCTCTTGTCTCAGCACCGCCGTGGTCATAGCTTCACTGGAATCTCTACGAATTTCGACGACAATCTAGATTTCTTCTCCAAGAATCGTTGGAGTCTCTCCGTTGCTGCTTCCGATGACTCCTCTGATGGATTATGA

Coding sequence (CDS)

ATGAACCGAAACTGGAGGGAGCCTCTTCCTGGTGCTCGAAATGCTCATCTCTTGTCTCAGCACCGCCGTGGTCATAGCTTCACTGGAATCTCTACGAATTTCGACGACAATCTAGATTTCTTCTCCAAGAATCGTTGGAGTCTCTCCGTTGCTGCTTCCGATGACTCCTCTGATGGATTATGA

Protein sequence

MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDSSDGL
Homology
[Close]
BLAST of Bhi12G000205 vs. TAIR10
Match: AT3G08670.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 5.7e-07
Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGH-------SFTGISTNFDDNLDFFSKNRWSLSVAAS 59
          MNRN RE L G RN   +SQ RRG+       S  G S + D+NLD FSK R S  +A+S
Sbjct: 1  MNRNLRESLAGGRNIPAISQFRRGNNNNSNNISQNGFSRDSDENLDLFSKIRRSFPLASS 60

[Close]
BLAST of Bhi12G000205 vs. TrEMBL
Match: tr|A0A1S3CIW9|A0A1S3CIW9_CUCME (mucin-5AC OS=Cucumis melo OX=3656 GN=LOC103501479 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-09
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLD 40
          MNRNWREPL G+RNA LLSQHRRGHSFTGIS + D+NLD
Sbjct: 1  MNRNWREPLSGSRNAPLLSQHRRGHSFTGISRDSDENLD 39

[Close]
BLAST of Bhi12G000205 vs. TrEMBL
Match: tr|A0A2R6RS05|A0A2R6RS05_ACTCH (Protein Ycf2 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc03069 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-07
Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDS 57
          MNR+ +E L G RN    +QHRRG S TG+S + D+NLD FS+NR SLSVA+SD+S
Sbjct: 1  MNRSSKESLVGGRNIPARTQHRRGMSLTGMSKDTDENLDLFSRNRRSLSVASSDES 56

[Close]
BLAST of Bhi12G000205 vs. TrEMBL
Match: tr|A0A2R6QZ86|A0A2R6QZ86_ACTCH (Adenomatous polyposis coli protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc00089 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 6.9e-07
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDS 57
          MNR+ +E L G RN    +QHRRG S TG+S + D+NLD FS+NR +LSVA+SD+S
Sbjct: 1  MNRSLKESLIGGRNIPSRTQHRRGLSLTGMSRDTDENLDLFSRNRPTLSVASSDES 56

[Close]
BLAST of Bhi12G000205 vs. TrEMBL
Match: tr|A0A0A0KY97|A0A0A0KY97_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G335230 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-06
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDD 37
          MNRNWREPL G+RNA L S HRRGHSFTGIS + D+
Sbjct: 1  MNRNWREPLSGSRNAPLFSHHRRGHSFTGISRDSDE 36

[Close]
BLAST of Bhi12G000205 vs. TrEMBL
Match: tr|A0A1S3TWB9|A0A1S3TWB9_VIGRR (flocculation protein FLO11 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759427 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-06
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0 

Query: 3  RNWREPLPGARNAHLLSQHRRGHSFTGI-STNFDDNLDFFSKNRWSLSVAASDDSSD 59
          RN RE L G+     L+ HRRGHSF G+ + N DDNLD FS NR SLS+A+SD+SSD
Sbjct: 5  RNVRESLLGS-----LNNHRRGHSFNGVANNNHDDNLDLFSNNRRSLSLASSDESSD 56

[Close]
BLAST of Bhi12G000205 vs. NCBI nr
Match: XP_022144099.1 (serine/arginine repetitive matrix protein 2 [Momordica charantia])

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15
Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDSSD 59
          MNRNWREPL   RNA LLS HRRGHSFT IS + D+NLD FSKNR SLSVAASDDSSD
Sbjct: 1  MNRNWREPLSAPRNAPLLSHHRRGHSFTAISRDSDENLDLFSKNRRSLSVAASDDSSD 58

[Close]
BLAST of Bhi12G000205 vs. NCBI nr
Match: XP_022950139.1 (mucin-5AC [Cucurbita moschata] >XP_022950140.1 mucin-5AC [Cucurbita moschata])

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15
Identity = 46/58 (79.31%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDSSD 59
          MNRNWRE L G RNA LLSQHRRGHSFTGIS + D+NLD FSKNR SLSVAASD S+D
Sbjct: 1  MNRNWRESLSGGRNAPLLSQHRRGHSFTGISRDSDENLDLFSKNRRSLSVAASDGSTD 58

[Close]
BLAST of Bhi12G000205 vs. NCBI nr
Match: XP_022978128.1 (uncharacterized protein YMR317W-like [Cucurbita maxima] >XP_022978129.1 uncharacterized protein YMR317W-like [Cucurbita maxima])

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15
Identity = 46/58 (79.31%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDSSD 59
          MNRNWRE L G RNA LLSQHRRGHSFTGIS + D+NLD FSKNR SLSVAASD S+D
Sbjct: 1  MNRNWRESLSGGRNAPLLSQHRRGHSFTGISRDSDENLDLFSKNRRSLSVAASDGSTD 58

[Close]
BLAST of Bhi12G000205 vs. NCBI nr
Match: XP_023543251.1 (uncharacterized protein YMR317W [Cucurbita pepo subsp. pepo] >XP_023543252.1 uncharacterized protein YMR317W [Cucurbita pepo subsp. pepo])

HSP 1 Score: 90.9 bits (224), Expect = 1.6e-15
Identity = 46/58 (79.31%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDSSD 59
          MNRNWRE L G RNA LLSQHRRGHSFTGIS + D+NLD FSKNR SLSVAASD S+D
Sbjct: 1  MNRNWRESLSGGRNAPLLSQHRRGHSFTGISRDSDENLDLFSKNRRSLSVAASDGSTD 58

[Close]
BLAST of Bhi12G000205 vs. NCBI nr
Match: XP_022966256.1 (nuclear pore complex protein DDB_G0274915-like isoform X1 [Cucurbita maxima] >XP_022966257.1 nuclear pore complex protein DDB_G0274915-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 85.9 bits (211), Expect = 5.1e-14
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 1  MNRNWREPLPGARNAHLLSQHRRGHSFTGISTNFDDNLDFFSKNRWSLSVAASDDSSD 59
          MNRNWRE + G RN  +LSQHR GHSFTGIS + D+NLD FSKNR SLSVAAS+DS D
Sbjct: 1  MNRNWRESIAGGRNGSVLSQHRHGHSFTGISRDSDENLDLFSKNRRSLSVAASEDSFD 58

The following BLAST results are available for this feature:
BLAST of Bhi12G000205 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G000205 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G08670.15.7e-0747.69unknown protein[more]
BLAST of Bhi12G000205 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CIW9|A0A1S3CIW9_CUCME2.5e-0982.05mucin-5AC OS=Cucumis melo OX=3656 GN=LOC103501479 PE=4 SV=1[more]
tr|A0A2R6RS05|A0A2R6RS05_ACTCH1.4e-0758.93Protein Ycf2 like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc0... [more]
tr|A0A2R6QZ86|A0A2R6QZ86_ACTCH6.9e-0757.14Adenomatous polyposis coli protein OS=Actinidia chinensis var. chinensis OX=1590... [more]
tr|A0A0A0KY97|A0A0A0KY97_CUCSA1.5e-0675.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G335230 PE=4 SV=1[more]
tr|A0A1S3TWB9|A0A1S3TWB9_VIGRR2.6e-0659.65flocculation protein FLO11 OS=Vigna radiata var. radiata OX=3916 GN=LOC106759427... [more]
BLAST of Bhi12G000205 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144099.11.6e-1579.31serine/arginine repetitive matrix protein 2 [Momordica charantia][more]
XP_022950139.11.6e-1579.31mucin-5AC [Cucurbita moschata] >XP_022950140.1 mucin-5AC [Cucurbita moschata][more]
XP_022978128.11.6e-1579.31uncharacterized protein YMR317W-like [Cucurbita maxima] >XP_022978129.1 uncharac... [more]
XP_023543251.11.6e-1579.31uncharacterized protein YMR317W [Cucurbita pepo subsp. pepo] >XP_023543252.1 unc... [more]
XP_022966256.15.1e-1472.41nuclear pore complex protein DDB_G0274915-like isoform X1 [Cucurbita maxima] >XP... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M000205Bhi12M000205mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi12G000205Wax gourdwgowgoB030
Bhi12G000205Cucumber (Gy14) v1cgywgoB602
Bhi12G000205Cucumber (Gy14) v2cgybwgoB241
Bhi12G000205Cucumber (Gy14) v2cgybwgoB427
Bhi12G000205Cucurbita maxima (Rimu)cmawgoB0365
Bhi12G000205Cucurbita maxima (Rimu)cmawgoB0429
Bhi12G000205Cucurbita maxima (Rimu)cmawgoB0719
Bhi12G000205Cucurbita moschata (Rifu)cmowgoB0358
Bhi12G000205Cucurbita moschata (Rifu)cmowgoB0425
Bhi12G000205Cucurbita moschata (Rifu)cmowgoB0500
Bhi12G000205Cucurbita moschata (Rifu)cmowgoB0712
Bhi12G000205Cucurbita pepo (Zucchini)cpewgoB0005
Bhi12G000205Cucurbita pepo (Zucchini)cpewgoB0226
Bhi12G000205Cucurbita pepo (Zucchini)cpewgoB0910
Bhi12G000205Wild cucumber (PI 183967)cpiwgoB254
Bhi12G000205Wild cucumber (PI 183967)cpiwgoB454
Bhi12G000205Cucumber (Chinese Long) v3cucwgoB256
Bhi12G000205Cucumber (Chinese Long) v3cucwgoB462
Bhi12G000205Cucumber (Chinese Long) v2cuwgoB254
Bhi12G000205Cucumber (Chinese Long) v2cuwgoB451
Bhi12G000205Bottle gourd (USVL1VR-Ls)lsiwgoB022
Bhi12G000205Bottle gourd (USVL1VR-Ls)lsiwgoB426
Bhi12G000205Melon (DHL92) v3.6.1medwgoB001
Bhi12G000205Melon (DHL92) v3.6.1medwgoB518
Bhi12G000205Melon (DHL92) v3.5.1mewgoB003
Bhi12G000205Melon (DHL92) v3.5.1mewgoB518
Bhi12G000205Watermelon (Charleston Gray)wcgwgoB198
Bhi12G000205Watermelon (Charleston Gray)wcgwgoB414
Bhi12G000205Watermelon (97103) v2wgowmbB061
Bhi12G000205Watermelon (97103) v2wgowmbB075
Bhi12G000205Watermelon (97103) v1wgowmB065
Bhi12G000205Watermelon (97103) v1wgowmB084
Bhi12G000205Silver-seed gourdcarwgoB1059
Bhi12G000205Silver-seed gourdcarwgoB1081