Bhi11G002575 (gene) Wax gourd

NameBhi11G002575
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 83637204 .. 83637444 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGACGAGTTGTGGAGGTTCCTAAGGATGAAGAAGACTCAGAGCAAAATGAATCTAACTTTGACCCTACTATAAATGGACCCACGAGAGAGGAGCGGCATGGGCCGAGAGGAAGGGGAGGTTTTCACAATAGAAAGCCACAAAGTAGAAGAGAAAGCCTCTATGGAGATCGAGCTTTTGGAAACATTAAAGTTAAATTTCCAAAATTTTATGATACATCTGATCTTGAAGACTTTTTCTAA

mRNA sequence

GAGACGAGTTGTGGAGGTTCCTAAGGATGAAGAAGACTCAGAGCAAAATGAATCTAACTTTGACCCTACTATAAATGGACCCACGAGAGAGGAGCGGCATGGGCCGAGAGGAAGGGGAGGTTTTCACAATAGAAAGCCACAAAGTAGAAGAGAAAGCCTCTATGGAGATCGAGCTTTTGGAAACATTAAAGTTAAATTTCCAAAATTTTATGATACATCTGATCTTGAAGACTTTTTCTAA

Coding sequence (CDS)

GAGACGAGTTGTGGAGGTTCCTAAGGATGAAGAAGACTCAGAGCAAAATGAATCTAACTTTGACCCTACTATAAATGGACCCACGAGAGAGGAGCGGCATGGGCCGAGAGGAAGGGGAGGTTTTCACAATAGAAAGCCACAAAGTAGAAGAGAAAGCCTCTATGGAGATCGAGCTTTTGGAAACATTAAAGTTAAATTTCCAAAATTTTATGATACATCTGATCTTGAAGACTTTTTCTAA

Protein sequence

RRVVEVPKDEEDSEQNESNFDPTINGPTREERHGPRGRGGFHNRKPQSRRESLYGDRAFGNIKVKFPKFYDTSDLEDFF
BLAST of Bhi11G002575 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia])

HSP 1 Score: 72.8 bits (177), Expect = 5.9e-10
Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 0

Query: 1   RRVVEVPKDEEDSEQNESNFDPTINGPTREERHGPRGRGGFHNRKPQSRRESLYGDRAFG 60
           R+  EV ++E D        +P +  P R ER G RGRGGF NR+ Q RRE  + DR FG
Sbjct: 38  RQPEEVLEEEXDLGXXXXXXEPEVAVPRRGERRGVRGRGGFQNRRQQGRREDNHVDRGFG 97

Query: 61  NIKVKFPKFYDTSDLEDF 79
           NIKVKFPKF+ TS+ ED+
Sbjct: 98  NIKVKFPKFHGTSNSEDY 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022159097.15.9e-1051.28uncharacterized protein LOC111025539 [Momordica charantia][more]

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002575Bhi11M002575mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None