Bhi11G002212 (gene) Wax gourd

Overview
NameBhi11G002212
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 71654957 .. 71655312 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCTCATTTATGACTGAGCTGAATGCTATAAAGGAAATGTTGATGCTGATTATGAAGGTATGTTACATAAAATAATGTTCAATTATGTAGTTATTTGTTTTATATTATTTCATTTACATTATTTCTAGGGTAAGTTGGTCGAATTGCAACAGTATTGTGGCACTGAAGAAGGTCCGTCATTTCAAAAACCATTTGCCCAGGACTCAACTGTTGACAATCCACCCACTAATGAGCCACGTGGTAAGGATCCACTTATTCTTGACCTATCTATTAAGAATCCCACTTGTATCGATGATATGTTTGATGCTAATCAGACCCAAATGGGTGAAGACATGGACGATGGAGAAGAT

mRNA sequence

ATGGAGTCCTCATTTATGACTGAGCTGAATGCTATAAAGGAAATGTTGATGCTGATTATGAAGGGTAAGTTGGTCGAATTGCAACAGTATTGTGGCACTGAAGAAGGTCCGTCATTTCAAAAACCATTTGCCCAGGACTCAACTGTTGACAATCCACCCACTAATGAGCCACGTGGTAAGGATCCACTTATTCTTGACCTATCTATTAAGAATCCCACTTGTATCGATGATATGTTTGATGCTAATCAGACCCAAATGGGTGAAGACATGGACGATGGAGAAGAT

Coding sequence (CDS)

ATGGAGTCCTCATTTATGACTGAGCTGAATGCTATAAAGGAAATGTTGATGCTGATTATGAAGGGTAAGTTGGTCGAATTGCAACAGTATTGTGGCACTGAAGAAGGTCCGTCATTTCAAAAACCATTTGCCCAGGACTCAACTGTTGACAATCCACCCACTAATGAGCCACGTGGTAAGGATCCACTTATTCTTGACCTATCTATTAAGAATCCCACTTGTATCGATGATATGTTTGATGCTAATCAGACCCAAATGGGTGAAGACATGGACGATGGAGAAGAT

Protein sequence

MESSFMTELNAIKEMLMLIMKGKLVELQQYCGTEEGPSFQKPFAQDSTVDNPPTNEPRGKDPLILDLSIKNPTCIDDMFDANQTQMGEDMDDGED
Homology
[Close]
BLAST of Bhi11G002212 vs. TrEMBL
Match: tr|A0A0A0M3N2|A0A0A0M3N2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.3e-04
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0 

Query: 1  MESSFMTELNAIKEMLMLIMKGKLVELQQYCGTEEGPSFQKPFAQDSTVDNPPTNEPRGK 60
          MESSFM EL  IKEML++++K KLVE Q++ G  +GP F  P         PP ++  G 
Sbjct: 1  MESSFMVELTTIKEMLIVLLKRKLVERQKFYGGGKGPPFVAPLV------GPPVHDLVGH 60

Query: 61 DPLILDLSIKNPTCIDDM 79
             +LDL I N   +DD+
Sbjct: 61 YVDVLDLEIDN-QALDDV 71

[Close]
BLAST of Bhi11G002212 vs. NCBI nr
Match: KGN66831.1 (hypothetical protein Csa_1G699600 [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-04
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 0 

Query: 1  MESSFMTELNAIKEMLMLIMKGKLVELQQYCGTEEGPSFQKPFAQDSTVDNPPTNEPRGK 60
          MESSFM EL  IKEML++++K KLVE Q++ G  +GP F  P         PP ++  G 
Sbjct: 1  MESSFMVELTTIKEMLIVLLKRKLVERQKFYGGGKGPPFVAPLV------GPPVHDLVGH 60

Query: 61 DPLILDLSIKNPTCIDDM 79
             +LDL I N   +DD+
Sbjct: 61 YVDVLDLEIDN-QALDDV 71

The following BLAST results are available for this feature:
BLAST of Bhi11G002212 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G002212 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G002212 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0M3N2|A0A0A0M3N2_CUCSA2.3e-0443.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699600 PE=4 SV=1[more]
BLAST of Bhi11G002212 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66831.13.4e-0443.59hypothetical protein Csa_1G699600 [Cucumis sativus][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M002212Bhi11M002212mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..64

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G002212Cucumber (Gy14) v1cgywgoB482
Bhi11G002212Cucumber (Gy14) v2cgybwgoB214
Bhi11G002212Cucurbita maxima (Rimu)cmawgoB0293
Bhi11G002212Cucurbita maxima (Rimu)cmawgoB0987
Bhi11G002212Cucurbita moschata (Rifu)cmowgoB0282
Bhi11G002212Cucurbita moschata (Rifu)cmowgoB0984
Bhi11G002212Cucurbita pepo (Zucchini)cpewgoB0746
Bhi11G002212Cucurbita pepo (Zucchini)cpewgoB1087
Bhi11G002212Wild cucumber (PI 183967)cpiwgoB223
Bhi11G002212Cucumber (Chinese Long) v3cucwgoB227
Bhi11G002212Cucumber (Chinese Long) v2cuwgoB223
Bhi11G002212Bottle gourd (USVL1VR-Ls)lsiwgoB302
Bhi11G002212Melon (DHL92) v3.6.1medwgoB384
Bhi11G002212Melon (DHL92) v3.5.1mewgoB382
Bhi11G002212Watermelon (Charleston Gray)wcgwgoB097
Bhi11G002212Watermelon (97103) v2wgowmbB018
Bhi11G002212Watermelon (97103) v1wgowmB024
Bhi11G002212Silver-seed gourdcarwgoB0197
Bhi11G002212Silver-seed gourdcarwgoB0320