Bhi11G002150 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G002150
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat
Location	chr11 : 69671431 .. 69675490 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGATGAAAGTTTTTAAGAATAGGTTACTGGTACAAAGGTTTTTGGGTTCTTTTGTAAAACTTTCCGCATCAGCCCTCTGCCGTCGGCCTCCGACTCACCCACCCACGATCTTCCATCTTCAACCTTCTCTTCACCTTGTGGCTTCTGGTGCTTCTTCTCCCGCAGCACGCACACCGGCCGGCCGCCATCTCCGTTCTCCATTCTCCTCCATCTTCAGCCACCATAACCCTCGTTTTGTTCTTCTTTAAACAGAGAATATGCTTTCTTTGGAATTGGAGCAGAAATGATGGCCAGTTATGTGGAAGCTTTTCGTGCCATGAGGCTGCGAATTCAACTTCAACGGCAGCTTCCTTCTCTATTCATCTGCTCCGTCGCGCCGGCAAATGCTCAGGTACTCTCCAACCTCCATACATCGCTTATATTCTCGTCTACTTCTGCGGAAGTCGCTTCACGTATCTCGGACTCTTCAATGGAAGTTCCGAGACGAATTGAAGCTGAACCGGCCGGATTTGGTTGACCGAATCTCCCGCCTCCTAGTCCTTCGACGGTTCGATGCCCTCGCAAAGCTCTCCTTCGGTTTCTCCGACGAACTGATGGATTTAGTGCTTCGGAATCTCAGATTGAACCCTTATGCTTCCTTAGAGTTCTTCAAATTGGCATCCAAACAACAGAAATTTAGACCGAATGTTAATTCCTATTGCAAGATTGTCCATATATTATCAAGGGCTCGAATGTACAAGGAGGTTTGGGTGTACTTGAATGAACTTGTGGTTCTATGCAAGAACAATTACACCGCATCTGTAGTGTGGGACGAGCTTGTAAGGGTGTATAGAGAATTTTCGTTTTCTCCTACGGTATTTGATATGATTTTGAAGGTTTATGCTGAGAAGGGAATGACAAATTTTGCACTACGTGTGTTTGACAATATGGGGAAGTGTGGTCGTGTTCCAAGTTTGAGGTCCTGCAATAGTTTGTTAAGTAATTTGGTCCAGAAAGGAGAAACATTCAGGGCTCTGCTTGTTTATGAACAAATGCTTGCTTTAGGCGTTCTTCCCGATATTTTTAGTTATACGATAATGGTGAATGCATATTGTAAGGAAGGAAGAGTGGATGAAGCCTTCAATTTTGTGAAAGAAATGGAGAGGTCATGTTGTGAACCGAATGTAGTAACTTACAATAGTTTGATTGATGGGTATGTCAGTCTAGGAGATGTTTTTGGGGCAAAAGAGGTGTTAGAGTTGATGTCTGAAAAGGGGGTTCCTGAAAATTCCATAACTTATACTTTGTTGATAAAAGGTTATTGCAAGGGAGGTCAGATGGAGCAGGCTGAGAAGCTAATTGGGTGCATGAAGGAGAAAAATTTGTTTGTTGATGAGCATGTTTATGGAGTGTTAATACATGCATATTGCAGCGCTGGTAGAGTAGACGATGCTCTTAGAATAATGGATGCAATGTTGAAAGTAGGCTTAAAAATGAATACTGTAATTTGCAACTCACTTATTAATGGGTACTGTAAGCTTGGTCATGTTAAAAAGGCGGCTGAAGTGTTGGTTAGTATGAAAGATTGGAACTTGAGACCGGATTCTTATAGCTATAACACTCTTCTTTATGGTTTTTGTAAACAAAAAGATTTCAGTGAGGCTTTCAAGCTTTGCGATGAGATGCACAACAAAGGAGTTAATCTTACTGTTGTGACTTATAATATCCTCCTCAAGAATTTTTTCCATGTTGGTCATGTTGACCATGCCCTACAGATTTGGAAATTAATGCATAAAAGAGGCGTGGCACCTGACGAGGTTAGTTATTGTACACTTTTAGATGCATTTTTCAAAGTAGGTGCTTTTGATAGAGCTATGATGATATGGAAGGATGCACTATCGAAGGGTTTTACGAAGAGTACAGCTCTTTATAATACCGTGATTTATGGCTTTTGTAAGATGGGGAAATTAGTGCAAGCACAAGAGATTTTTCTTAAGATGCAGGAACTAGGTTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGGATTTTGTAGAGTTGGAAATGTGGTAGAATCCTTAAAATTGAAGGACATGGCTGAGAGAGAGGGAATAAGTGCTTCCACTGAAATATACAATTCTCTTATTAATGGTGTTTTTAGATCTGAAGATTTACAGAAATTGAATGGCCTTCTAGCTGAAATGAAGAGTCGGGAAATATCTCCCAATGTTGTAACTTATGGCTCCCTTATAGCTGGTTGGTGTGACAAAGGGATGATGGACAAAGCATATAATGAATACTTTAAGATGATCGACAAAGGGATTGCACCTAATATTATCATCGGTAGTAAAATTGTAAGTAGTCTGTATCGACTTGGTGAGATTGACGAAGCAAGTTTGATTTTTCATCAAATGGTAGATATTGGTCCTGTTCTAGATCATGCACGCTCTATAAAATTGCCCAAATTTGGTTTGAGACATCTCAAAACTCAAAAAATTGTGGATTCTTTTGGCGAAAGGGCCACGAGCATCCCTATGTCGAACAACATTGTATATAATATTGCAATTACAGGACTATGCAAGTCTAAGAAGGTCGATGATGTTAGAAGGATTTTGTCAGATTTGTTACTTCTAGGCTTTCGACCCGATAATTATACATTTTCTTCTCTTATTCATGCTTGCTCTACTGCTGGCAAGGTCAATGAAGCCTTCTGTCTAAGAGATGACATGATAAAGGCAGGTCTTGTTCCAAATATTGTCGTGTACAATGCTCTTATAAATGGTTTATGCAAGTCAGGGAATCTGGATCGAGCTCAGAGACTATTCCATAAACTGGCCCAAAAGGGTTTATCACCCACCGTCATTACATATAACACTCTCATCGATGGATATTGCAAGGCTGGTAGAACATTAGAGGCTTTGAAACTGAAAGATAGAATGAGAGAAGAAGGCATTTCTCCATCTTCTGTTACCTATTCTACATTGATTCATGGGTTTTATAAGGGAGGAGAATTTGAACAATCTGTGAGGCTTTTGAATGAAATGATCAAGGCAGGGAAAGATTCGAGTGTAATGGATCCACTTGTGGCTCGAGTTTACATCAAATGGAGAGACAAGCATAAAGAATAGCGAAGCTCTGCGCTTACGATTTCCAAGGTTCATTTGACCTTTTCTTTATGAATTCACTCATAGTTCATCATTTAGTTTCTAATTCTGGATTGTCATTGTGGTGTTTGCATAAACGTAGCTATTTTTGTCATGTTTGATATCTTTATGCTTATGCCATGGTAAAATTACGTGTAGCATGGATGCCTACGCGTCTGAGTTCCCTATTTGATGGAGAATCTTAGAACACTCAGAGTAATCCTGAAAACTAACCCAAGAACAACCCTGCATACATCCATTCTTTTAATTATTGGACAAAAAAATGTAACGATTCATTGGTATCAGATTATTTTCTCCTTCAGGTATAGGGTTGCACCTAAATAGCATCATTGGTATTGTAATGAAGAATCATGGCTCAATTGAAGGCTTGGGCGTGCAAGGGTTAAGCCGTCACATTCTGAAAAATAAAAAATCTGCTCATTTTCTGCTGAAGAAAAGGAGGGGCATGAAAGTAAGGCCATCGCATTGGCATGTTCCATCACTTTGAAGTTCTGCCTTGCTGTTAAAGCCGAGAAATTTAAAATTCTATGGGGTGTTTGGCCCCAAGTTTGGTTGGTGGATAAAAAAAAACTCACCCACCATTTGGTTCACCAATTATTAAAGAGGTTTATTACCTCGTTATTCACGTTAACTCATATTTTTTATCTCGTTATTTGCATCAACTCTCTCAATTACTCTCTTCTATAATAATTATCAACTCAATTCAATAATTTATAAATTATTTTCTTCCCAAAGAAAAAGGTAATTTATAAATTATTTCCTATGGTTCATTTTTCTTGTCTTTTCTCTTTTCTATGTGGATTATGTTAAATTAGTGATTAATCCAAAAGTTTAAGCGGATTGATGGAGGTAAATTTGTATTATATAATCTAATTCAACAACGTGATGTTTTTTATGCTAAAATAAAA

mRNA sequence

GGAAGATGAAAGTTTTTAAGAATAGGTTACTGGTACAAAGGTTTTTGGGTTCTTTTGTAAAACTTTCCGCATCAGCCCTCTGCCGTCGGCCTCCGACTCACCCACCCACGATCTTCCATCTTCAACCTTCTCTTCACCTTGTGGCTTCTGGTGCTTCTTCTCCCGCAGCACGCACACCGGCCGGCCGCCATCTCCGTTCTCCATTCTCCTCCATCTTCAGCCACCATAACCCTCGTTTTGTTCTTCTTTAAACAGAGAATATGCTTTCTTTGGAATTGGAGCAGAAATGATGGCCAGTTATGTGGAAGCTTTTCGTGCCATGAGGCTGCGAATTCAACTTCAACGGCAGCTTCCTTCTCTATTCATCTGCTCCGTCGCGCCGGCAAATGCTCAGGTACTCTCCAACCTCCATACATCGCTTATATTCTCGTCTACTTCTGCGGAAGTCGCTTCACGTATCTCGGACTCTTCAATGGAAGTTCCGAGACGAATTGAAGCTGAACCGGCCGGATTTGGTTGACCGAATCTCCCGCCTCCTAGTCCTTCGACGGTTCGATGCCCTCGCAAAGCTCTCCTTCGGTTTCTCCGACGAACTGATGGATTTAGTGCTTCGGAATCTCAGATTGAACCCTTATGCTTCCTTAGAGTTCTTCAAATTGGCATCCAAACAACAGAAATTTAGACCGAATGTTAATTCCTATTGCAAGATTGTCCATATATTATCAAGGGCTCGAATGTACAAGGAGGTTTGGGTGTACTTGAATGAACTTGTGGTTCTATGCAAGAACAATTACACCGCATCTGTAGTGTGGGACGAGCTTGTAAGGGTGTATAGAGAATTTTCGTTTTCTCCTACGGTATTTGATATGATTTTGAAGGTTTATGCTGAGAAGGGAATGACAAATTTTGCACTACGTGTGTTTGACAATATGGGGAAGTGTGGTCGTGTTCCAAGTTTGAGGTCCTGCAATAGTTTGTTAAGTAATTTGGTCCAGAAAGGAGAAACATTCAGGGCTCTGCTTGTTTATGAACAAATGCTTGCTTTAGGCGTTCTTCCCGATATTTTTAGTTATACGATAATGGTGAATGCATATTGTAAGGAAGGAAGAGTGGATGAAGCCTTCAATTTTGTGAAAGAAATGGAGAGGTCATGTTGTGAACCGAATGTAGTAACTTACAATAGTTTGATTGATGGGTATGTCAGTCTAGGAGATGTTTTTGGGGCAAAAGAGGTGTTAGAGTTGATGTCTGAAAAGGGGGTTCCTGAAAATTCCATAACTTATACTTTGTTGATAAAAGGTTATTGCAAGGGAGGTCAGATGGAGCAGGCTGAGAAGCTAATTGGGTGCATGAAGGAGAAAAATTTGTTTGTTGATGAGCATGTTTATGGAGTGTTAATACATGCATATTGCAGCGCTGGTAGAGTAGACGATGCTCTTAGAATAATGGATGCAATGTTGAAAGTAGGCTTAAAAATGAATACTGTAATTTGCAACTCACTTATTAATGGGTACTGTAAGCTTGGTCATGTTAAAAAGGCGGCTGAAGTGTTGGTTAGTATGAAAGATTGGAACTTGAGACCGGATTCTTATAGCTATAACACTCTTCTTTATGGTTTTTGTAAACAAAAAGATTTCAGTGAGGCTTTCAAGCTTTGCGATGAGATGCACAACAAAGGAGTTAATCTTACTGTTGTGACTTATAATATCCTCCTCAAGAATTTTTTCCATGTTGGTCATGTTGACCATGCCCTACAGATTTGGAAATTAATGCATAAAAGAGGCGTGGCACCTGACGAGGTTAGTTATTGTACACTTTTAGATGCATTTTTCAAAGTAGGTGCTTTTGATAGAGCTATGATGATATGGAAGGATGCACTATCGAAGGGTTTTACGAAGAGTACAGCTCTTTATAATACCGTGATTTATGGCTTTTGTAAGATGGGGAAATTAGTGCAAGCACAAGAGATTTTTCTTAAGATGCAGGAACTAGGTTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGGATTTTGTAGAGTTGGAAATGTGGTAGAATCCTTAAAATTGAAGGACATGGCTGAGAGAGAGGGAATAAGTGCTTCCACTGAAATATACAATTCTCTTATTAATGGTGTTTTTAGATCTGAAGATTTACAGAAATTGAATGGCCTTCTAGCTGAAATGAAGAGTCGGGAAATATCTCCCAATGTTGTAACTTATGGCTCCCTTATAGCTGGTTGGTGTGACAAAGGGATGATGGACAAAGCATATAATGAATACTTTAAGATGATCGACAAAGGGATTGCACCTAATATTATCATCGGTAGTAAAATTGTAAGTAGTCTGTATCGACTTGGTGAGATTGACGAAGCAAGTTTGATTTTTCATCAAATGGTAGATATTGGTCCTGTTCTAGATCATGCACGCTCTATAAAATTGCCCAAATTTGGTTTGAGACATCTCAAAACTCAAAAAATTGTGGATTCTTTTGGCGAAAGGGCCACGAGCATCCCTATGTCGAACAACATTGTATATAATATTGCAATTACAGGACTATGCAAGTCTAAGAAGGTCGATGATGTTAGAAGGATTTTGTCAGATTTGTTACTTCTAGGCTTTCGACCCGATAATTATACATTTTCTTCTCTTATTCATGCTTGCTCTACTGCTGGCAAGGTCAATGAAGCCTTCTGTCTAAGAGATGACATGATAAAGGCAGGTCTTGTTCCAAATATTGTCGTGTACAATGCTCTTATAAATGGTTTATGCAAGTCAGGGAATCTGGATCGAGCTCAGAGACTATTCCATAAACTGGCCCAAAAGGGTTTATCACCCACCGTCATTACATATAACACTCTCATCGATGGATATTGCAAGGCTGGTAGAACATTAGAGGCTTTGAAACTGAAAGATAGAATGAGAGAAGAAGGCATTTCTCCATCTTCTGTTACCTATTCTACATTGATTCATGGGTTTTATAAGGGAGGAGAATTTGAACAATCTGTGAGGCTTTTGAATGAAATGATCAAGGCAGGGAAAGATTCGAGTGTAATGGATCCACTTGTGGCTCGAGTTTACATCAAATGGAGAGACAAGCATAAAGAATAGCGAAGCTCTGCGCTTACGATTTCCAAGGTATAGGGTTGCACCTAAATAGCATCATTGGTATTGTAATGAAGAATCATGGCTCAATTGAAGGCTTGGGCGTGCAAGGGTTAAGCCGTCACATTCTGAAAAATAAAAAATCTGCTCATTTTCTGCTGAAGAAAAGGAGGGGCATGAAAGTAAGGCCATCGCATTGGCATGTTCCATCACTTTGAAGTTCTGCCTTGCTGTTAAAGCCGAGAAATTTAAAATTCTATGGGGTGTTTGGCCCCAAGTTTGGTTGGTGGATAAAAAAAAACTCACCCACCATTTGGTTCACCAATTATTAAAGAGGTTTATTACCTCGTTATTCACGTTAACTCATATTTTTTATCTCGTTATTTGCATCAACTCTCTCAATTACTCTCTTCTATAATAATTATCAACTCAATTCAATAATTTATAAATTATTTTCTTCCCAAAGAAAAAGGTAATTTATAAATTATTTCCTATGGTTCATTTTTCTTGTCTTTTCTCTTTTCTATGTGGATTATGTTAAATTAGTGATTAATCCAAAAGTTTAAGCGGATTGATGGAGGTAAATTTGTATTATATAATCTAATTCAACAACGTGATGTTTTTTATGCTAAAATAAAA

Coding sequence (CDS)

ATGCTCAGGTACTCTCCAACCTCCATACATCGCTTATATTCTCGTCTACTTCTGCGGAAGTCGCTTCACGTATCTCGGACTCTTCAATGGAAGTTCCGAGACGAATTGAAGCTGAACCGGCCGGATTTGGTTGACCGAATCTCCCGCCTCCTAGTCCTTCGACGGTTCGATGCCCTCGCAAAGCTCTCCTTCGGTTTCTCCGACGAACTGATGGATTTAGTGCTTCGGAATCTCAGATTGAACCCTTATGCTTCCTTAGAGTTCTTCAAATTGGCATCCAAACAACAGAAATTTAGACCGAATGTTAATTCCTATTGCAAGATTGTCCATATATTATCAAGGGCTCGAATGTACAAGGAGGTTTGGGTGTACTTGAATGAACTTGTGGTTCTATGCAAGAACAATTACACCGCATCTGTAGTGTGGGACGAGCTTGTAAGGGTGTATAGAGAATTTTCGTTTTCTCCTACGGTATTTGATATGATTTTGAAGGTTTATGCTGAGAAGGGAATGACAAATTTTGCACTACGTGTGTTTGACAATATGGGGAAGTGTGGTCGTGTTCCAAGTTTGAGGTCCTGCAATAGTTTGTTAAGTAATTTGGTCCAGAAAGGAGAAACATTCAGGGCTCTGCTTGTTTATGAACAAATGCTTGCTTTAGGCGTTCTTCCCGATATTTTTAGTTATACGATAATGGTGAATGCATATTGTAAGGAAGGAAGAGTGGATGAAGCCTTCAATTTTGTGAAAGAAATGGAGAGGTCATGTTGTGAACCGAATGTAGTAACTTACAATAGTTTGATTGATGGGTATGTCAGTCTAGGAGATGTTTTTGGGGCAAAAGAGGTGTTAGAGTTGATGTCTGAAAAGGGGGTTCCTGAAAATTCCATAACTTATACTTTGTTGATAAAAGGTTATTGCAAGGGAGGTCAGATGGAGCAGGCTGAGAAGCTAATTGGGTGCATGAAGGAGAAAAATTTGTTTGTTGATGAGCATGTTTATGGAGTGTTAATACATGCATATTGCAGCGCTGGTAGAGTAGACGATGCTCTTAGAATAATGGATGCAATGTTGAAAGTAGGCTTAAAAATGAATACTGTAATTTGCAACTCACTTATTAATGGGTACTGTAAGCTTGGTCATGTTAAAAAGGCGGCTGAAGTGTTGGTTAGTATGAAAGATTGGAACTTGAGACCGGATTCTTATAGCTATAACACTCTTCTTTATGGTTTTTGTAAACAAAAAGATTTCAGTGAGGCTTTCAAGCTTTGCGATGAGATGCACAACAAAGGAGTTAATCTTACTGTTGTGACTTATAATATCCTCCTCAAGAATTTTTTCCATGTTGGTCATGTTGACCATGCCCTACAGATTTGGAAATTAATGCATAAAAGAGGCGTGGCACCTGACGAGGTTAGTTATTGTACACTTTTAGATGCATTTTTCAAAGTAGGTGCTTTTGATAGAGCTATGATGATATGGAAGGATGCACTATCGAAGGGTTTTACGAAGAGTACAGCTCTTTATAATACCGTGATTTATGGCTTTTGTAAGATGGGGAAATTAGTGCAAGCACAAGAGATTTTTCTTAAGATGCAGGAACTAGGTTGTCCACCTGATGAAATAACATATAGAACTTTAATTGATGGATTTTGTAGAGTTGGAAATGTGGTAGAATCCTTAAAATTGAAGGACATGGCTGAGAGAGAGGGAATAAGTGCTTCCACTGAAATATACAATTCTCTTATTAATGGTGTTTTTAGATCTGAAGATTTACAGAAATTGAATGGCCTTCTAGCTGAAATGAAGAGTCGGGAAATATCTCCCAATGTTGTAACTTATGGCTCCCTTATAGCTGGTTGGTGTGACAAAGGGATGATGGACAAAGCATATAATGAATACTTTAAGATGATCGACAAAGGGATTGCACCTAATATTATCATCGGTAGTAAAATTGTAAGTAGTCTGTATCGACTTGGTGAGATTGACGAAGCAAGTTTGATTTTTCATCAAATGGTAGATATTGGTCCTGTTCTAGATCATGCACGCTCTATAAAATTGCCCAAATTTGGTTTGAGACATCTCAAAACTCAAAAAATTGTGGATTCTTTTGGCGAAAGGGCCACGAGCATCCCTATGTCGAACAACATTGTATATAATATTGCAATTACAGGACTATGCAAGTCTAAGAAGGTCGATGATGTTAGAAGGATTTTGTCAGATTTGTTACTTCTAGGCTTTCGACCCGATAATTATACATTTTCTTCTCTTATTCATGCTTGCTCTACTGCTGGCAAGGTCAATGAAGCCTTCTGTCTAAGAGATGACATGATAAAGGCAGGTCTTGTTCCAAATATTGTCGTGTACAATGCTCTTATAAATGGTTTATGCAAGTCAGGGAATCTGGATCGAGCTCAGAGACTATTCCATAAACTGGCCCAAAAGGGTTTATCACCCACCGTCATTACATATAACACTCTCATCGATGGATATTGCAAGGCTGGTAGAACATTAGAGGCTTTGAAACTGAAAGATAGAATGAGAGAAGAAGGCATTTCTCCATCTTCTGTTACCTATTCTACATTGATTCATGGGTTTTATAAGGGAGGAGAATTTGAACAATCTGTGAGGCTTTTGAATGAAATGATCAAGGCAGGGAAAGATTCGAGTGTAATGGATCCACTTGTGGCTCGAGTTTACATCAAATGGAGAGACAAGCATAAAGAATAG

Protein sequence

MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALAKLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLRSCNSLLSNLVQKGETFRALLVYEQMLALGVLPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVFGAKEVLELMSEKGVPENSITYTLLIKGYCKGGQMEQAEKLIGCMKEKNLFVDEHVYGVLIHAYCSAGRVDDALRIMDAMLKVGLKMNTVICNSLINGYCKLGHVKKAAEVLVSMKDWNLRPDSYSYNTLLYGFCKQKDFSEAFKLCDEMHNKGVNLTVVTYNILLKNFFHVGHVDHALQIWKLMHKRGVAPDEVSYCTLLDAFFKVGAFDRAMMIWKDALSKGFTKSTALYNTVIYGFCKMGKLVQAQEIFLKMQELGCPPDEITYRTLIDGFCRVGNVVESLKLKDMAEREGISASTEIYNSLINGVFRSEDLQKLNGLLAEMKSREISPNVVTYGSLIAGWCDKGMMDKAYNEYFKMIDKGIAPNIIIGSKIVSSLYRLGEIDEASLIFHQMVDIGPVLDHARSIKLPKFGLRHLKTQKIVDSFGERATSIPMSNNIVYNIAITGLCKSKKVDDVRRILSDLLLLGFRPDNYTFSSLIHACSTAGKVNEAFCLRDDMIKAGLVPNIVVYNALINGLCKSGNLDRAQRLFHKLAQKGLSPTVITYNTLIDGYCKAGRTLEALKLKDRMREEGISPSSVTYSTLIHGFYKGGEFEQSVRLLNEMIKAGKDSSVMDPLVARVYIKWRDKHKE

Homology

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BLAST of Bhi11G002150 vs. Swiss-Prot
Match: sp|Q9LN69|PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)

HSP 1 Score: 210.7 bits (535), Expect = 6.9e-53
Identity = 118/198 (59.60%), Postives = 143/198 (72.22%), Query Frame = 0


Query: 1   MLRYSPTSI--HRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDA 60
           MLR SP  +  ++L   L  R     SRTL+ + R      RP+L++R+SRLLVL R++A
Sbjct: 1   MLRRSPARVVAYQLLPFLYTRSFSEASRTLRRELRGGNGRIRPELLERVSRLLVLGRYEA 60

Query: 61  LAKLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMY 120
           L  LS  FSDEL++ +LR LRLNP A LE F LASKQQKFRP+  +YCK+VHILSRAR Y
Sbjct: 61  LHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNY 120

Query: 121 KEVWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRV 180
           ++   YL ELV L   N++  VVW ELVRV++EFSFSPTVFDMILKVYAEKG+   AL V
Sbjct: 121 QQTKSYLCELVAL---NHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHV 180

Query: 181 FDNMGKCGRVPSLRSCNS 197
           FDNMG  GR+PSL SCNS
Sbjct: 181 FDNMGNYGRIPSLLSCNS 195

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BLAST of Bhi11G002150 vs. Swiss-Prot
Match: sp|Q9LVQ5|PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-07
Identity = 44/129 (34.11%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 71  MDLVLRNLRL-NPYASLEFFKLASKQQKFRPN--VNSYCKIVHILSRARMYKEVWVYLNE 130
           MD     LRL +   +L+F K   KQ     +  V   C   HIL RARMY      L E
Sbjct: 38  MDYRQARLRLVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKE 97

Query: 131 LVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGR 190
           L ++   +  +S V+  L+  YR  + +P+V+D++++VY  +GM   +L +F  MG  G 
Sbjct: 98  LSLM---SGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF 157

Query: 191 VPSLRSCNS 197
            PS+ +CN+
Sbjct: 158 NPSVYTCNA 163

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BLAST of Bhi11G002150 vs. Swiss-Prot
Match: sp|P0C894|PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-07
Identity = 39/122 (31.97%), Postives = 58/122 (47.54%), Query Frame = 0


Query: 74  VLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCK 133
           VL  L+ +P  + +FFK +  +  F+ +V SYC + HIL  ARMY +    L E+V+   
Sbjct: 114 VLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKA 173

Query: 134 NNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLRS 193
           +     V+W         F     VFD +  V  + GM   A++ F  M +    P  RS
Sbjct: 174 DCDVFDVLWSTRNVCVPGFG----VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS 231

Query: 194 CN 196
           CN
Sbjct: 234 CN 231

[Close]

BLAST of Bhi11G002150 vs. Swiss-Prot
Match: sp|Q9FND8|PP409_ARATH (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX=3702 GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-05
Identity = 33/106 (31.13%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 74  VLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCK 133
           VL   + +   ++ FFK        RPNV +YC ++HIL  ++ +     +L EL+ L  
Sbjct: 85  VLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTS 144

Query: 134 NNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVF 180
                  V+  LV    E ++ P VFDM++K Y + G+     RVF
Sbjct: 145 KKEEVD-VFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVF 189

[Close]

BLAST of Bhi11G002150 vs. Swiss-Prot
Match: sp|O49558|PP331_ARATH (Pentatricopeptide repeat-containing protein At4g21170 OS=Arabidopsis thaliana OX=3702 GN=At4g21170 PE=3 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 9.1e-05
Identity = 35/124 (28.23%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 74  VLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCK 133
           +LR  R  P  +L+FF  A    +F P++ S+C+++ + + + + +   + L  LV    
Sbjct: 75  ILRETRKCPKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLV---- 134

Query: 134 NNYTASVVWDELVRVYR-EFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLR 193
              + S+V  E+ R +  E S S ++  ++L+ YA KG  +  L VF  M +    PS  
Sbjct: 135 ETNSVSLVVGEMHRWFEGEVSLSVSL-SLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQS 193

Query: 194 SCNS 197
           + NS
Sbjct: 195 AYNS 193

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BLAST of Bhi11G002150 vs. TAIR10
Match: AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 210.7 bits (535), Expect = 3.8e-54
Identity = 118/198 (59.60%), Postives = 143/198 (72.22%), Query Frame = 0


Query: 1   MLRYSPTSI--HRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDA 60
           MLR SP  +  ++L   L  R     SRTL+ + R      RP+L++R+SRLLVL R++A
Sbjct: 1   MLRRSPARVVAYQLLPFLYTRSFSEASRTLRRELRGGNGRIRPELLERVSRLLVLGRYEA 60

Query: 61  LAKLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMY 120
           L  LS  FSDEL++ +LR LRLNP A LE F LASKQQKFRP+  +YCK+VHILSRAR Y
Sbjct: 61  LHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNY 120

Query: 121 KEVWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRV 180
           ++   YL ELV L   N++  VVW ELVRV++EFSFSPTVFDMILKVYAEKG+   AL V
Sbjct: 121 QQTKSYLCELVAL---NHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHV 180

Query: 181 FDNMGKCGRVPSLRSCNS 197
           FDNMG  GR+PSL SCNS
Sbjct: 181 FDNMGNYGRIPSLLSCNS 195

[Close]

BLAST of Bhi11G002150 vs. TAIR10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 6.4e-09
Identity = 44/129 (34.11%), Postives = 68/129 (52.71%), Query Frame = 0


Query: 71  MDLVLRNLRL-NPYASLEFFKLASKQQKFRPN--VNSYCKIVHILSRARMYKEVWVYLNE 130
           MD     LRL +   +L+F K   KQ     +  V   C   HIL RARMY      L E
Sbjct: 78  MDYRQARLRLVHGKLALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKE 137

Query: 131 LVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGR 190
           L ++   +  +S V+  L+  YR  + +P+V+D++++VY  +GM   +L +F  MG  G 
Sbjct: 138 LSLM---SGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGF 197

Query: 191 VPSLRSCNS 197
            PS+ +CN+
Sbjct: 198 NPSVYTCNA 203

[Close]

BLAST of Bhi11G002150 vs. TAIR10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-08
Identity = 39/122 (31.97%), Postives = 58/122 (47.54%), Query Frame = 0


Query: 74  VLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCK 133
           VL  L+ +P  + +FFK +  +  F+ +V SYC + HIL  ARMY +    L E+V+   
Sbjct: 114 VLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKA 173

Query: 134 NNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLRS 193
           +     V+W         F     VFD +  V  + GM   A++ F  M +    P  RS
Sbjct: 174 DCDVFDVLWSTRNVCVPGFG----VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS 231

Query: 194 CN 196
           CN
Sbjct: 234 CN 231

[Close]

BLAST of Bhi11G002150 vs. TAIR10
Match: AT5G40400.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.0e-06
Identity = 33/106 (31.13%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 74  VLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCK 133
           VL   + +   ++ FFK        RPNV +YC ++HIL  ++ +     +L EL+ L  
Sbjct: 85  VLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTS 144

Query: 134 NNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVF 180
                  V+  LV    E ++ P VFDM++K Y + G+     RVF
Sbjct: 145 KKEEVD-VFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVF 189

[Close]

BLAST of Bhi11G002150 vs. TAIR10
Match: AT1G11710.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 50.8 bits (120), Expect = 5.0e-06
Identity = 39/167 (23.35%), Postives = 74/167 (44.31%), Query Frame = 0


Query: 37  KLNRPDLVDRISRLLVL----RRFDALAKLSFGFSDELMDLVLRNLRLNPYASLEFFKLA 96
           K + P+  D +   L L    RR++ L + S   ++ L+  VLR  R +P  +LEF+   
Sbjct: 22  KFSNPEPEDILFSALCLNLRQRRWNTLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWV 81

Query: 97  SKQQKFRPNVNSY---CKIVHILSRARMYKEVWVYLNELVVLCKNNYTASVVWDELVRVY 156
            +      + N +   C ++H+L  +R + +    +  L+ +     +   V   L+R Y
Sbjct: 82  LRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSY 141

Query: 157 REFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLRSCNS 197
           +    SP VFD +++   + G    A  V +     G   S+ + N+
Sbjct: 142 QACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNN 188

[Close]

BLAST of Bhi11G002150 vs. TrEMBL
Match: tr|A0A1S3CRW3|A0A1S3CRW3_CUCME (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19290 OS=Cucumis melo OX=3656 GN=LOC103503981 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.2e-90
Identity = 177/196 (90.31%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALA 60
           ML YS TSIHRLYS LLLR SLHVSRTLQWKF DELKL++PDLVDRISRLLVLRRFDALA
Sbjct: 1   MLWYSSTSIHRLYSYLLLRNSLHVSRTLQWKFGDELKLSQPDLVDRISRLLVLRRFDALA 60

Query: 61  KLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKE 120
            LSF FS+ELMDLVLRNLRLNP ASLEFFKLASKQ KFRP+V+SYCKIVHILSRARMYKE
Sbjct: 61  NLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKE 120

Query: 121 VWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFD 180
           V VYLNELVVLCKNNY AS VWDELVRVYREFSFSPTVFDMILKVYAEKGMT FAL VFD
Sbjct: 121 VRVYLNELVVLCKNNYIASAVWDELVRVYREFSFSPTVFDMILKVYAEKGMTKFALCVFD 180

Query: 181 NMGKCGRVPSLRSCNS 197
           NMGKCGRVPSLRSCNS
Sbjct: 181 NMGKCGRVPSLRSCNS 196

[Close]

BLAST of Bhi11G002150 vs. TrEMBL
Match: tr|A0A0A0LD67|A0A0A0LD67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854260 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.8e-75
Identity = 149/165 (90.30%), Postives = 155/165 (93.94%), Query Frame = 0


Query: 32  FRDELKLNRPDLVDRISRLLVLRRFDALAKLSFGFSDELMDLVLRNLRLNPYASLEFFKL 91
           FRDELKL++PDLVDRISRLLVLRRFDALA LSF FS+ELMDLVLRNLRLNP ASLEFFKL
Sbjct: 62  FRDELKLSQPDLVDRISRLLVLRRFDALANLSFSFSNELMDLVLRNLRLNPDASLEFFKL 121

Query: 92  ASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCKNNYTASVVWDELVRVYRE 151
           ASKQ KFRP+V+SYCKIVHILSRARMYKEV VYLNELVVLCKNNY AS VWDELV VYRE
Sbjct: 122 ASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYRE 181

Query: 152 FSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLRSCNS 197
           FSFSPTVFDMILKV+AEKGMT FAL VFDNMGKCGRVPSLRSCNS
Sbjct: 182 FSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNS 226

[Close]

BLAST of Bhi11G002150 vs. TrEMBL
Match: tr|A0A251RKB0|A0A251RKB0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G585600 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 7.8e-70
Identity = 142/198 (71.72%), Postives = 158/198 (79.80%), Query Frame = 0


Query: 1   MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDAL- 60
           MLRY P            R+S HVSRTL WK RDE KL RP+L DRIS LLVL+R+DAL 
Sbjct: 1   MLRYFP------------RRSFHVSRTLNWKLRDEYKLTRPELQDRISNLLVLQRYDALD 60

Query: 61  -AKLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMY 120
             KLSF FSD+L++ +LR L+LNP A L FFKLASKQQK+RPN+ SYC IVHILSRARMY
Sbjct: 61  KLKLSFEFSDQLLNTILRKLKLNPVACLSFFKLASKQQKYRPNLKSYCIIVHILSRARMY 120

Query: 121 KEVWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRV 180
            +   YLNELV LC NNY+ASVVWDELVRVYREF+FSPTVFDMILKV+AEKGMT +AL V
Sbjct: 121 DQTRAYLNELVRLCNNNYSASVVWDELVRVYREFTFSPTVFDMILKVFAEKGMTKYALHV 180

Query: 181 FDNMGKCGRVPSLRSCNS 197
           FDNMGKCGR PSLRSCNS
Sbjct: 181 FDNMGKCGRSPSLRSCNS 186

[Close]

BLAST of Bhi11G002150 vs. TrEMBL
Match: tr|W9SHJ8|W9SHJ8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021225 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.9e-69
Identity = 134/178 (75.28%), Postives = 152/178 (85.39%), Query Frame = 0


Query: 19  RKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALAKLSFGFSDELMDLVLRNL 78
           R+SLHVSR LQWK RDE KL RP+LVDRISRLLVL+RF+A+ +LSF FSDEL+D VLR L
Sbjct: 18  RRSLHVSRPLQWKLRDEYKLTRPELVDRISRLLVLQRFNAIDELSFQFSDELLDSVLRKL 77

Query: 79  RLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCKNNYTA 138
           +LNP A L FF+LASK+Q FRPN+ SYC IVHILSRARMY E   +L ELV LC+NNY+A
Sbjct: 78  KLNPNACLGFFRLASKRQNFRPNLKSYCVIVHILSRARMYDETRAHLKELVSLCRNNYSA 137

Query: 139 SVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLRSCNS 197
             +W+ELVRVY EFSFSPTVFDMILK YAEKG+T +AL VFDNMGKCGRVPSLRSCNS
Sbjct: 138 FTIWNELVRVYEEFSFSPTVFDMILKAYAEKGLTKYALHVFDNMGKCGRVPSLRSCNS 195

[Close]

BLAST of Bhi11G002150 vs. TrEMBL
Match: tr|A0A2P6PYI0|A0A2P6PYI0_ROSCH (Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0300361 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.6e-69
Identity = 137/179 (76.54%), Postives = 155/179 (86.59%), Query Frame = 0


Query: 19  RKSLHVSRT-LQWKFRDELKLNRPDLVDRISRLLVLRRFDALAKLSFGFSDELMDLVLRN 78
           R+ LHVSRT L WK RDE KL RP+L+DRISRLLVL+R+DAL  LSF FSD+L++ VLR 
Sbjct: 9   RRRLHVSRTGLHWKPRDEYKLTRPELLDRISRLLVLQRYDALNNLSFEFSDQLLNTVLRK 68

Query: 79  LRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKEVWVYLNELVVLCKNNYT 138
           L+LNP A LEFFKLASKQQKFRPN+ SYC IVHILSRARM+ +   YLNELV LCK+NY 
Sbjct: 69  LKLNPNACLEFFKLASKQQKFRPNLKSYCIIVHILSRARMHDQTRAYLNELVALCKSNYP 128

Query: 139 ASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFDNMGKCGRVPSLRSCNS 197
           A VVW+ELVRVYREF+FSPTVFDMILKV+AE+GMT +AL VFDNMGKCGRVPSLRSCNS
Sbjct: 129 AFVVWNELVRVYREFTFSPTVFDMILKVFAEQGMTKYALHVFDNMGKCGRVPSLRSCNS 187

HSP 2 Score: 58.5 bits (140), Expect = 8.8e-05
Identity = 30/65 (46.15%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 679 LDHARSIKLPKFGLRHLKTQKIVDSFGERATSIPMSNNIVYNIAITGLCKSKKVDDVRRI 738
           L H     + K  +   + QK  DS  E A S+ + NN++YNIAI G+CKS KV D RR 
Sbjct: 635 LVHYDPFPVQKGDITQREIQKFADSLDESAISVCLPNNVLYNIAIFGICKSGKVGDARRF 694

Query: 739 LSDLL 744
           LS LL
Sbjct: 695 LSALL 699

[Close]

BLAST of Bhi11G002150 vs. NCBI nr
Match: XP_008466623.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19290 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 7.9e-90
Identity = 177/196 (90.31%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALA 60
           ML YS TSIHRLYS LLLR SLHVSRTLQWKF DELKL++PDLVDRISRLLVLRRFDALA
Sbjct: 1   MLWYSSTSIHRLYSYLLLRNSLHVSRTLQWKFGDELKLSQPDLVDRISRLLVLRRFDALA 60

Query: 61  KLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKE 120
            LSF FS+ELMDLVLRNLRLNP ASLEFFKLASKQ KFRP+V+SYCKIVHILSRARMYKE
Sbjct: 61  NLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKE 120

Query: 121 VWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFD 180
           V VYLNELVVLCKNNY AS VWDELVRVYREFSFSPTVFDMILKVYAEKGMT FAL VFD
Sbjct: 121 VRVYLNELVVLCKNNYIASAVWDELVRVYREFSFSPTVFDMILKVYAEKGMTKFALCVFD 180

Query: 181 NMGKCGRVPSLRSCNS 197
           NMGKCGRVPSLRSCNS
Sbjct: 181 NMGKCGRVPSLRSCNS 196

[Close]

BLAST of Bhi11G002150 vs. NCBI nr
Match: XP_011652402.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At1g19290 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 3.9e-89
Identity = 175/196 (89.29%), Postives = 181/196 (92.35%), Query Frame = 0


Query: 1   MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALA 60
           ML YS T IHRLYS LLLR SLHVSRTLQWKFRDELKL++PDLVDRISRLLVLRRFDALA
Sbjct: 1   MLWYSSTPIHRLYSHLLLRNSLHVSRTLQWKFRDELKLSQPDLVDRISRLLVLRRFDALA 60

Query: 61  KLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKE 120
            LSF FS+ELMDLVLRNLRLNP ASLEFFKLASKQ KFRP+V+SYCKIVHILSRARMYKE
Sbjct: 61  NLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKE 120

Query: 121 VWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFD 180
           V VYLNELVVLCKNNY AS VWDELV VYREFSFSPTVFDMILKV+AEKGMT FAL VFD
Sbjct: 121 VRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFD 180

Query: 181 NMGKCGRVPSLRSCNS 197
           NMGKCGRVPSLRSCNS
Sbjct: 181 NMGKCGRVPSLRSCNS 196

[Close]

BLAST of Bhi11G002150 vs. NCBI nr
Match: XP_023523251.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo subsp. pepo] >XP_023523252.1 putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 5.3e-86
Identity = 167/196 (85.20%), Postives = 176/196 (89.80%), Query Frame = 0


Query: 1   MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALA 60
           M+R+ PTSIHRLYS LLLRKS+HVS TLQWKFRDELKLNR DLVDRISRLLVLRR DALA
Sbjct: 1   MIRFFPTSIHRLYSCLLLRKSIHVSGTLQWKFRDELKLNRSDLVDRISRLLVLRRVDALA 60

Query: 61  KLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKE 120
           KLSF FSDELMD VLRNLRLNPYA LEFFKLAS QQKFRPN+NSYCKIVHILSRARM++E
Sbjct: 61  KLSFSFSDELMDSVLRNLRLNPYACLEFFKLASSQQKFRPNINSYCKIVHILSRARMHEE 120

Query: 121 VWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFD 180
             VYLNELVVLCKNNYTA VVWDELVRVY+EFS+SPTV       YAEKGMT FALRVFD
Sbjct: 121 ARVYLNELVVLCKNNYTACVVWDELVRVYKEFSYSPTVXXXXXXXYAEKGMTKFALRVFD 180

Query: 181 NMGKCGRVPSLRSCNS 197
           +MGKCGRVPSLRSCNS
Sbjct: 181 DMGKCGRVPSLRSCNS 196

[Close]

BLAST of Bhi11G002150 vs. NCBI nr
Match: XP_022981984.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita maxima])

HSP 1 Score: 323.2 bits (827), Expect = 2.9e-84
Identity = 165/196 (84.18%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 1   MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALA 60
           M+R+ PTSIHRLYS LLLRKS+HVS TLQWKFRDELKLN+ DLVDRISRLLVLRR DALA
Sbjct: 1   MIRFFPTSIHRLYSCLLLRKSIHVSGTLQWKFRDELKLNQSDLVDRISRLLVLRRVDALA 60

Query: 61  KLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKE 120
           KLSF FSDELMD VLRNLRLNPYA LEFFKLAS QQKFRPN+NSYCKIVHILSRARM++E
Sbjct: 61  KLSFSFSDELMDSVLRNLRLNPYACLEFFKLASSQQKFRPNINSYCKIVHILSRARMHEE 120

Query: 121 VWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFD 180
             VYLNELVVLCKNNYTA VVWDELVRVY+EFSFSP          AEKGMT FALRVFD
Sbjct: 121 ARVYLNELVVLCKNNYTACVVWDELVRVYKEFSFSPXXXXXXXXXXAEKGMTKFALRVFD 180

Query: 181 NMGKCGRVPSLRSCNS 197
           NMGKCGRVPSLRSCNS
Sbjct: 181 NMGKCGRVPSLRSCNS 196

[Close]

BLAST of Bhi11G002150 vs. NCBI nr
Match: XP_022940949.1 (putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita moschata])

HSP 1 Score: 318.5 bits (815), Expect = 7.1e-83
Identity = 162/196 (82.65%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 1   MLRYSPTSIHRLYSRLLLRKSLHVSRTLQWKFRDELKLNRPDLVDRISRLLVLRRFDALA 60
           M+R+ PTSIHRLYS LLLRKS+HVS  LQWKFRDELKLN+ DLVDRISRLLVLRR DALA
Sbjct: 1   MIRFFPTSIHRLYSCLLLRKSIHVSGILQWKFRDELKLNQSDLVDRISRLLVLRRVDALA 60

Query: 61  KLSFGFSDELMDLVLRNLRLNPYASLEFFKLASKQQKFRPNVNSYCKIVHILSRARMYKE 120
           KLSF FSD+LMD +LRNLRLNPYA LEFFKLAS QQKFRPN+NSYCKIVHILSRARM++E
Sbjct: 61  KLSFSFSDDLMDSMLRNLRLNPYACLEFFKLASSQQKFRPNINSYCKIVHILSRARMHEE 120

Query: 121 VWVYLNELVVLCKNNYTASVVWDELVRVYREFSFSPTVFDMILKVYAEKGMTNFALRVFD 180
             VYLNELVVLCKNNYTA VVWDELVRVY+EFSFSP          AEKGMT FALRVFD
Sbjct: 121 ARVYLNELVVLCKNNYTACVVWDELVRVYKEFSFSPXXXXXXXXXXAEKGMTKFALRVFD 180

Query: 181 NMGKCGRVPSLRSCNS 197
           NMGKCGRVPSLRSCNS
Sbjct: 181 NMGKCGRVPSLRSCNS 196

The following BLAST results are available for this feature:

BLAST of Bhi11G002150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LN69\|PPR50_ARATH	6.9e-53	59.60	Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th...	[more]
sp\|Q9LVQ5\|PP432_ARATH	1.1e-07	34.11	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]
sp\|P0C894\|PP143_ARATH	3.3e-07	31.97	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
sp\|Q9FND8\|PP409_ARATH	1.8e-05	31.13	Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX...	[more]
sp\|O49558\|PP331_ARATH	9.1e-05	28.23	Pentatricopeptide repeat-containing protein At4g21170 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi11G002150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19290.1	3.8e-54	59.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G55840.1	6.4e-09	34.11	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G02150.1	1.8e-08	31.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G40400.1	1.0e-06	31.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11710.1	5.0e-06	23.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Bhi11G002150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRW3\|A0A1S3CRW3_CUCME	5.2e-90	90.31	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g19...	[more]
tr\|A0A0A0LD67\|A0A0A0LD67_CUCSA	2.8e-75	90.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G854260 PE=4 SV=1	[more]
tr\|A0A251RKB0\|A0A251RKB0_PRUPE	7.8e-70	71.72	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G585600 PE=4 SV=1	[more]
tr\|W9SHJ8\|W9SHJ8_9ROSA	3.9e-69	75.28	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021225 PE=4 SV=1	[more]
tr\|A0A2P6PYI0\|A0A2P6PYI0_ROSCH	6.6e-69	76.54	Putative tetratricopeptide-like helical domain-containing protein OS=Rosa chinen...	[more]

BLAST of Bhi11G002150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466623.1	7.9e-90	90.31	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
XP_011652402.1	3.9e-89	89.29	PREDICTED: putative pentatricopeptide repeat-containing protein At1g19290 [Cucum...	[more]
XP_023523251.1	5.3e-86	85.20	putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita pepo s...	[more]
XP_022981984.1	2.9e-84	84.18	putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita maxima...	[more]
XP_022940949.1	7.1e-83	82.65	putative pentatricopeptide repeat-containing protein At1g19290 [Cucurbita moscha...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M002150	Bhi11M002150	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 281..359 e-value: 3.9E-19 score: 70.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 564..687 e-value: 5.0E-23 score: 83.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 360..446 e-value: 1.6E-26 score: 94.7 coord: 801..896 e-value: 6.2E-28 score: 99.3 coord: 698..800 e-value: 4.4E-26 score: 93.3 coord: 143..277 e-value: 7.6E-33 score: 115.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 447..563 e-value: 5.0E-31 score: 110.4
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 334..509 coord: 754..866
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 715..762 e-value: 2.8E-9 score: 36.9 coord: 576..622 e-value: 5.8E-10 score: 39.1 coord: 295..343 e-value: 9.8E-12 score: 44.8 coord: 505..553 e-value: 2.4E-15 score: 56.4 coord: 365..413 e-value: 2.6E-16 score: 59.4 coord: 435..483 e-value: 2.4E-13 score: 49.9 coord: 224..272 e-value: 2.5E-16 score: 59.5 coord: 819..868 e-value: 1.1E-17 score: 63.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 161..186 e-value: 1.2 score: 9.4 coord: 193..222 e-value: 0.088 score: 13.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 262..292 e-value: 4.4E-7 score: 27.7 coord: 542..575 e-value: 7.2E-5 score: 20.7 coord: 717..750 e-value: 7.2E-5 score: 20.7 coord: 787..820 e-value: 6.4E-7 score: 27.2 coord: 227..261 e-value: 1.1E-10 score: 39.0 coord: 578..611 e-value: 5.7E-4 score: 17.9 coord: 333..365 e-value: 3.4E-7 score: 28.0 coord: 612..646 e-value: 3.3E-4 score: 18.6 coord: 508..541 e-value: 1.5E-7 score: 29.1 coord: 857..886 e-value: 1.2E-5 score: 23.2 coord: 193..226 e-value: 4.6E-5 score: 21.3 coord: 822..855 e-value: 6.0E-12 score: 43.0 coord: 367..401 e-value: 2.1E-8 score: 31.8 coord: 402..434 e-value: 3.0E-9 score: 34.5 coord: 472..502 e-value: 0.0026 score: 15.8 coord: 437..471 e-value: 3.9E-9 score: 34.1 coord: 752..786 e-value: 4.3E-7 score: 27.7 coord: 297..330 e-value: 1.0E-5 score: 23.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 781..811 e-value: 2.7E-12 score: 46.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 330..364 score: 12.079
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 101..131 score: 5.601
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 820..854 score: 14.217
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 715..749 score: 10.326
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 540..574 score: 10.402
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 505..539 score: 12.299
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 365..399 score: 12.101
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 295..329 score: 11.531
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 190..224 score: 9.383
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 225..259 score: 13.658
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 260..294 score: 11.378
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 575..609 score: 9.372
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 470..504 score: 9.778
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 155..189 score: 9.197
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 610..644 score: 11.564
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 645..679 score: 7.388
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 750..784 score: 11.674
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 785..819 score: 13.68
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 435..469 score: 11.652
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 400..434 score: 12.299
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 855..889 score: 10.687
None	No IPR available	PANTHER	PTHR24015:SF695	SUBFAMILY NOT NAMED	coord: 1..855
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..855

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G002150	Csa3G854260	Cucumber (Chinese Long) v2	cuwgoB225
Bhi11G002150	MELO3C003888	Melon (DHL92) v3.5.1	mewgoB384
Bhi11G002150	ClCG05G019220	Watermelon (Charleston Gray)	wcgwgoB410
Bhi11G002150	CSPI03G42440	Wild cucumber (PI 183967)	cpiwgoB225
Bhi11G002150	Cucsa.342100	Cucumber (Gy14) v1	cgywgoB675
Bhi11G002150	CmaCh01G018860	Cucurbita maxima (Rimu)	cmawgoB0551
Bhi11G002150	CmoCh01G019490	Cucurbita moschata (Rifu)	cmowgoB0549
Bhi11G002150	Lsi04G016360	Bottle gourd (USVL1VR-Ls)	lsiwgoB346
Bhi11G002150	CsGy3G039960	Cucumber (Gy14) v2	cgybwgoB216
Bhi11G002150	MELO3C003888.2	Melon (DHL92) v3.6.1	medwgoB386
Bhi11G002150	Carg17125	Silver-seed gourd	carwgoB1090
Bhi11G002150	CsaV3_3G044860	Cucumber (Chinese Long) v3	cucwgoB230
Bhi11G002150	Cla020739	Watermelon (97103) v1	wgowmB045
Bhi11G002150	Cla97C05G100750	Watermelon (97103) v2	wgowmbB040

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G002150	Cucurbita maxima (Rimu)	cmawgoB0008
Bhi11G002150	Cucurbita moschata (Rifu)	cmowgoB0000
Bhi11G002150	Cucurbita pepo (Zucchini)	cpewgoB0669
Bhi11G002150	Cucurbita pepo (Zucchini)	cpewgoB0973
Bhi11G002150	Silver-seed gourd	carwgoB0116