Bhi11G002035 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G002035
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr11 : 65830454 .. 65831092 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTAGTTGATAATGGAAGGAATTTGAATGATCAATGGTTTATTGATATGGTGATGAATTCGATTGATAAAATTTGGAGAAGTAGTAGCAGTATGGCAGGGGAGTTAAGGTTTGTTCAATCAAAAGTGAATATGGGAGATTTGATGAATGGAGGAAATTCGATGGCGGGAATCGGCGAATTAAGCATAACGAAAACGATTATTGTTGAACGAGATGGCGATGAGAATATTTTGTTATCGGCATGGAATTTTGGGGTAAATGACAATTCTGGAATGAGTGAGATTGAGAAGCTCGTGAACGACATTAATGGCGTTGGTGTTGAGGCTACTATTAGTCCTATGGATTTCACTCACCAAATGGGTTTTGGAATCGGTGGTGACTTCAACGGTGGGGACCCTATGGGGAGTCTGTATTCTGATGGTTGTTACCACGGCGGCGGTGATGGTGTAGGGATTGATGTGAATGATGATGCAGAGATGTTGCATCAAGGATTGTTTGAAAGTGGAATAAGCTGCAGCAATGGAAATTGAAATGAAATTCAAAATGGAAATGGAAATGAGAATCAAAATAATGAAGGTGAAGACGTTGAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA

mRNA sequence

ATGGATCTAGTTGATAATGGAAGGAATTTGAATGATCAATGGTTTATTGATATGGTGATGAATTCGATTGATAAAATTTGGAGAAGTAGTAGCAGTATGGCAGGGGAGTTAAGGTTTGTTCAATCAAAAGTGAATATGGGAGATTTGATGAATGGAGGAAATTCGATGGCGGGAATCGGCGAATTAAGCATAACGAAAACGATTATTGTTGAACGAGATGGCGATGAGAATATTTTGTTATCGGCATGGAATTTTGGGGTAAATGACAATTCTGGAATGAGTGAGATTGAGAAGCTCGTGAACGACATTAATGGCGTTGGTGTTGAGGCTACTATTAGTCCTATGGATTTCACTCACCAAATGGGTTTTGGAATCGGTGGTGACTTCAACGGTGGGGACCCTATGGGGAGTCTGTATTCTGATGGTTGTTACCACGGCGGCGGTGAAGACGTTGAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA

Coding sequence (CDS)

ATGGATCTAGTTGATAATGGAAGGAATTTGAATGATCAATGGTTTATTGATATGGTGATGAATTCGATTGATAAAATTTGGAGAAGTAGTAGCAGTATGGCAGGGGAGTTAAGGTTTGTTCAATCAAAAGTGAATATGGGAGATTTGATGAATGGAGGAAATTCGATGGCGGGAATCGGCGAATTAAGCATAACGAAAACGATTATTGTTGAACGAGATGGCGATGAGAATATTTTGTTATCGGCATGGAATTTTGGGGTAAATGACAATTCTGGAATGAGTGAGATTGAGAAGCTCGTGAACGACATTAATGGCGTTGGTGTTGAGGCTACTATTAGTCCTATGGATTTCACTCACCAAATGGGTTTTGGAATCGGTGGTGACTTCAACGGTGGGGACCCTATGGGGAGTCTGTATTCTGATGGTTGTTACCACGGCGGCGGTGAAGACGTTGAAGATGATCTTCTAAGTAAGGAATGGCAAAACAACTTTACTCCATGA

Protein sequence

MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLMNGGNSMAGIGELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVGVEATISPMDFTHQMGFGIGGDFNGGDPMGSLYSDGCYHGGGEDVEDDLLSKEWQNNFTP

Homology

[Close]

BLAST of Bhi11G002035 vs. TrEMBL
Match: tr|A0A1S3B6W2|A0A1S3B6W2_CUCME (uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.1e-41
Identity = 113/207 (54.59%), Postives = 129/207 (62.32%), Query Frame = 0


Query: 1   MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLMN-GGNSMAGI 60
           +DL+DNGRNL DQWFIDMVMN+ DKI  SSSSMAGEL FVQ++ N  DLMN GG+SM  +
Sbjct: 181 IDLIDNGRNLMDQWFIDMVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEV 240

Query: 61  GELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVG--VEATISPMDF 120
            E+  T TIIVE DG+EN LLS WNFG ND+SGMSEIEKLVNDI GVG  VE   S MD 
Sbjct: 241 SEIGGTGTIIVEGDGEENNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDL 300

Query: 121 THQMG-FGIGGDFNGGDPMGSLYSDG---------CYHG-------GGEDVED------- 167
           +H+ G FGI  +  GG PMGS+Y+DG           HG       G E+V         
Sbjct: 301 SHEQGDFGINCNVVGG-PMGSVYTDGVEVNDDAEMMLHGLYENGISGEENVNQXXXXXXX 360

[Close]

BLAST of Bhi11G002035 vs. TrEMBL
Match: tr|A0A0A0LB39|A0A0A0LB39_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 8.5e-39
Identity = 105/172 (61.05%), Postives = 117/172 (68.02%), Query Frame = 0


Query: 1   MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLM--NGGNSMAG 60
           MDLVDNGRNL DQWFIDMVMN+ DK   SSSSMAGEL FVQS+ N  D+M   GGNSM  
Sbjct: 182 MDLVDNGRNLMDQWFIDMVMNTNDKTGGSSSSMAGELGFVQSEGNGVDMMTNGGGNSMME 241

Query: 61  IGELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVG-VEATISPMDF 120
             E+  T TIIVE DG+EN LLS WNFG ND+ GMSEIEKLVNDI GVG  E   S MD 
Sbjct: 242 ASEIGGTGTIIVEGDGEENNLLSEWNFGGNDDCGMSEIEKLVNDIGGVGHAELNASSMDL 301

Query: 121 TH-QMGFGIGGDFNGGDPMGSLYSDGCYHGGGEDVEDD---LLSKEWQNNFT 166
           +H Q  FGI  D N G PMGSL++DG       DV DD   +LS  ++N  T
Sbjct: 302 SHAQADFGI--DCNVGGPMGSLFTDGV------DVNDDGEMMLSGLFENEIT 345

[Close]

BLAST of Bhi11G002035 vs. NCBI nr
Match: XP_008442937.1 (PREDICTED: uncharacterized protein LOC103486691 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 6.1e-41
Identity = 113/207 (54.59%), Postives = 129/207 (62.32%), Query Frame = 0


Query: 1   MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLMN-GGNSMAGI 60
           +DL+DNGRNL DQWFIDMVMN+ DKI  SSSSMAGEL FVQ++ N  DLMN GG+SM  +
Sbjct: 181 IDLIDNGRNLMDQWFIDMVMNTNDKIGGSSSSMAGELGFVQAEGNGVDLMNGGGSSMVEV 240

Query: 61  GELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVG--VEATISPMDF 120
            E+  T TIIVE DG+EN LLS WNFG ND+SGMSEIEKLVNDI GVG  VE   S MD 
Sbjct: 241 SEIGGTGTIIVEGDGEENNLLSEWNFGGNDDSGMSEIEKLVNDIGGVGGHVELNASSMDL 300

Query: 121 THQMG-FGIGGDFNGGDPMGSLYSDG---------CYHG-------GGEDVED------- 167
           +H+ G FGI  +  GG PMGS+Y+DG           HG       G E+V         
Sbjct: 301 SHEQGDFGINCNVVGG-PMGSVYTDGVEVNDDAEMMLHGLYENGISGEENVNQXXXXXXX 360

[Close]

BLAST of Bhi11G002035 vs. NCBI nr
Match: XP_004136717.1 (PREDICTED: uncharacterized protein LOC101219702 [Cucumis sativus] >KGN59225.1 hypothetical protein Csa_3G782720 [Cucumis sativus])

HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38
Identity = 105/172 (61.05%), Postives = 117/172 (68.02%), Query Frame = 0


Query: 1   MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLM--NGGNSMAG 60
           MDLVDNGRNL DQWFIDMVMN+ DK   SSSSMAGEL FVQS+ N  D+M   GGNSM  
Sbjct: 182 MDLVDNGRNLMDQWFIDMVMNTNDKTGGSSSSMAGELGFVQSEGNGVDMMTNGGGNSMME 241

Query: 61  IGELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVG-VEATISPMDF 120
             E+  T TIIVE DG+EN LLS WNFG ND+ GMSEIEKLVNDI GVG  E   S MD 
Sbjct: 242 ASEIGGTGTIIVEGDGEENNLLSEWNFGGNDDCGMSEIEKLVNDIGGVGHAELNASSMDL 301

Query: 121 TH-QMGFGIGGDFNGGDPMGSLYSDGCYHGGGEDVEDD---LLSKEWQNNFT 166
           +H Q  FGI  D N G PMGSL++DG       DV DD   +LS  ++N  T
Sbjct: 302 SHAQADFGI--DCNVGGPMGSLFTDGV------DVNDDGEMMLSGLFENEIT 345

[Close]

BLAST of Bhi11G002035 vs. NCBI nr
Match: XP_023005873.1 (uncharacterized protein LOC111498747 [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 9.5e-26
Identity = 92/193 (47.67%), Postives = 107/193 (55.44%), Query Frame = 0


Query: 1   MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLMNGGNSMAGIG 60
           MDLVDNGRNL DQWFIDMVMNS DKI  SSSSMAGEL F QS+ N+     GGNSM  + 
Sbjct: 182 MDLVDNGRNLMDQWFIDMVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEVV 241

Query: 61  ELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVGVEATISPMDFTH- 120
           +L    TI  E D DEN LL  WNFG     GMSEIEKLV+++ GV   A  SPMD  + 
Sbjct: 242 DLGGRTTITAEGDMDENNLLCDWNFG-GTGCGMSEIEKLVSNLGGVDDNA--SPMDLANP 301

Query: 121 QMGFGIGGDFNGGD--------PMGSLYSDGCYHGGGEDVEDD----------------- 167
           Q  +G+ GD  GGD         +  L+  G         E++                 
Sbjct: 302 QANYGMIGD--GGDGASVEAEMMLHGLFGSGSRSRSSNGTENETLIEKVXXXXXXXXXXX 361

[Close]

BLAST of Bhi11G002035 vs. NCBI nr
Match: XP_023539789.1 (uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-25
Identity = 92/193 (47.67%), Postives = 106/193 (54.92%), Query Frame = 0


Query: 1   MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLMNGGNSMAGIG 60
           MDLVDNGRNL DQWFIDMVMNS DKI  SSSSMAGEL F QS+ N+     GGNSM  + 
Sbjct: 182 MDLVDNGRNLMDQWFIDMVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEVV 241

Query: 61  ELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVGVEATISPMDFTH- 120
           +L    TI  E D DEN LL  WNFG     GMSEIEKLV+++ GV   A  SPMD  + 
Sbjct: 242 DLGGRTTITAEGDMDENNLLCDWNFG-GTGCGMSEIEKLVSNLGGVDDNA--SPMDLANP 301

Query: 121 QMGFGIGGDFNGGD--------PMGSLYSDGCYHGGGEDVEDD----------------- 167
           Q  +GI GD  GGD         +  L+  G         E++                 
Sbjct: 302 QANYGIIGD--GGDGASVEAEMMLHGLFGSGTRSRSSNGTENETLIEKVXXXXXXXXXXX 361

[Close]

BLAST of Bhi11G002035 vs. NCBI nr
Match: XP_022936706.1 (MADS-box transcription factor PHERES 1-like [Cucurbita moschata])

HSP 1 Score: 124.8 bits (312), Expect = 2.8e-25
Identity = 92/193 (47.67%), Postives = 106/193 (54.92%), Query Frame = 0


Query: 1   MDLVDNGRNLNDQWFIDMVMNSIDKIWRSSSSMAGELRFVQSKVNMGDLMNGGNSMAGIG 60
           MDLVDNGRNL DQWFIDMVMNS DKI  SSSSMAGEL F QS+ N+     GGNSM    
Sbjct: 182 MDLVDNGRNLMDQWFIDMVMNSNDKIGGSSSSMAGELGF-QSEGNV-----GGNSMMEAV 241

Query: 61  ELSITKTIIVERDGDENILLSAWNFGVNDNSGMSEIEKLVNDINGVGVEATISPMDFTH- 120
           +L    TI  E D DEN LL  WNFG     GMSEIEKLV+++ GV   A  SPMD  + 
Sbjct: 242 DLGGRTTITAEGDMDENNLLCDWNFG-GTGCGMSEIEKLVSNLGGVDDNA--SPMDLANP 301

Query: 121 QMGFGIGGDFNGGD--------PMGSLYSDGCYHGGGEDVEDD----------------- 167
           Q  +G+ GD  GGD         +  L+  G         E++                 
Sbjct: 302 QANYGMIGD--GGDGASVEAEMMLHGLFGSGSRSRSSNGTENETLIXXXXXXXXXXXXXX 361

The following BLAST results are available for this feature:

BLAST of Bhi11G002035 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G002035 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi11G002035 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B6W2\|A0A1S3B6W2_CUCME	4.1e-41	54.59	uncharacterized protein LOC103486691 OS=Cucumis melo OX=3656 GN=LOC103486691 PE=...	[more]
tr\|A0A0A0LB39\|A0A0A0LB39_CUCSA	8.5e-39	61.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782720 PE=4 SV=1	[more]

BLAST of Bhi11G002035 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442937.1	6.1e-41	54.59	PREDICTED: uncharacterized protein LOC103486691 [Cucumis melo]	[more]
XP_004136717.1	1.3e-38	61.05	PREDICTED: uncharacterized protein LOC101219702 [Cucumis sativus] >KGN59225.1 hy...	[more]
XP_023005873.1	9.5e-26	47.67	uncharacterized protein LOC111498747 [Cucurbita maxima]	[more]
XP_023539789.1	1.6e-25	47.67	uncharacterized protein LOC111800368 [Cucurbita pepo subsp. pepo]	[more]
XP_022936706.1	2.8e-25	47.67	MADS-box transcription factor PHERES 1-like [Cucurbita moschata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000976	transcription regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M002035	Bhi11M002035	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G002035	Cucumber (Gy14) v1	cgywgoB480
Bhi11G002035	Cucumber (Gy14) v2	cgybwgoB213
Bhi11G002035	Cucurbita maxima (Rimu)	cmawgoB0292
Bhi11G002035	Cucurbita maxima (Rimu)	cmawgoB0990
Bhi11G002035	Cucurbita maxima (Rimu)	cmawgoB0978
Bhi11G002035	Cucurbita moschata (Rifu)	cmowgoB0283
Bhi11G002035	Cucurbita moschata (Rifu)	cmowgoB0988
Bhi11G002035	Cucurbita moschata (Rifu)	cmowgoB0974
Bhi11G002035	Cucurbita pepo (Zucchini)	cpewgoB0745
Bhi11G002035	Cucurbita pepo (Zucchini)	cpewgoB0752
Bhi11G002035	Cucurbita pepo (Zucchini)	cpewgoB1075
Bhi11G002035	Cucurbita pepo (Zucchini)	cpewgoB1088
Bhi11G002035	Wild cucumber (PI 183967)	cpiwgoB222
Bhi11G002035	Cucumber (Chinese Long) v3	cucwgoB228
Bhi11G002035	Cucumber (Chinese Long) v2	cuwgoB222
Bhi11G002035	Bottle gourd (USVL1VR-Ls)	lsiwgoB301
Bhi11G002035	Melon (DHL92) v3.6.1	medwgoB383
Bhi11G002035	Melon (DHL92) v3.5.1	mewgoB381
Bhi11G002035	Watermelon (Charleston Gray)	wcgwgoB096
Bhi11G002035	Watermelon (97103) v2	wgowmbB016
Bhi11G002035	Watermelon (97103) v1	wgowmB022
Bhi11G002035	Silver-seed gourd	carwgoB0317
Bhi11G002035	Silver-seed gourd	carwgoB0795