Bhi11G002000 (gene) Wax gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGATAAAATATGTAAAAGCCAACAAAAAGGTTACTATCACAGACCCCGTCTCAGAGGGGGCGAGCATAGAGAGATGTATGAAGATAGTTATAGCCGAAATGCACCCATTATTTTCTTCTTTATAAAAATCTCATATTTCTCCTAAATTTCAACTAATCCTTTCTCATCTTTCATTCCAATTCAATTACCTCTCTCAACAAATGGGCAAGCATACCTACCACCGTCCGGACCACCACCACAGCCACCGAGGCTGCAGCTGCGGCGGTGGCTGCTTCATCACCTTTCTCAAGATCCTCATCACCATCGTCGTCATCGTTGGTCTCGCCGTGTTGATCTTATGGCTCATATTCCGTCCCAATAAAGTCAAATTCCAAGTCACCGACGCTAAACTCACCCAATTCAACCTCACCGATAACCAGCTCCATTATAACTTGGCCCTCAACGTCACCGTCAGAAATCCCAACAGACGAATCGGAGTCTACTACGATACCATCGAAGTCGCCGCCGTTTACAAAGACCAGCGCCTACAGACCCAGTGGCTGCCGCCGTTTTACCAAGGCTACAAGACAACCGCCGTCATCACCTCTGTTTTCTCCGGCCAGCAGCTCCTTCTCCTCGCTGGGCAGGGGCTAACGGAGTTCAACGCCGAGACACTTGCCGGCGTCTACGAGATGAACGTGTGGCTTAATCTTCGGATAAGGTTGAAGTTCGGCGCCGTTAGGATCGGGAAGTTTAAGCCGAAGGTGAATTGTGAGTTCAAAGTTCCGTTGACTTCCGATGGAGGCTCAGTTACTTCGGTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTGAGTTAATTCGTCTTTTTCTTGGTCGTATTTCTTAGCTTTTGTTGTGAATCCATAAATTTATTTTATTTGTTTGTTGTTGTTCGTATTATTTTAATTCTAATTAATTTTGGCGATTAGCTATTTATATGGTGTATGAATAATTATAATAAAACTTTAGTATGGTTGGTTTTCTTATTTTTAGTTTAATTA TGTGATAAAATATGTAAAAGCCAACAAAAAGGTTACTATCACAGACCCCGTCTCAGAGGGGGCGAGCATAGAGAGATGTATGAAGATAGTTATAGCCGAAATGCACCCATTATTTTCTTCTTTATAAAAATCTCATATTTCTCCTAAATTTCAACTAATCCTTTCTCATCTTTCATTCCAATTCAATTACCTCTCTCAACAAATGGGCAAGCATACCTACCACCGTCCGGACCACCACCACAGCCACCGAGGCTGCAGCTGCGGCGGTGGCTGCTTCATCACCTTTCTCAAGATCCTCATCACCATCGTCGTCATCGTTGGTCTCGCCGTGTTGATCTTATGGCTCATATTCCGTCCCAATAAAGTCAAATTCCAAGTCACCGACGCTAAACTCACCCAATTCAACCTCACCGATAACCAGCTCCATTATAACTTGGCCCTCAACGTCACCGTCAGAAATCCCAACAGACGAATCGGAGTCTACTACGATACCATCGAAGTCGCCGCCGTTTACAAAGACCAGCGCCTACAGACCCAGTGGCTGCCGCCGTTTTACCAAGGCTACAAGACAACCGCCGTCATCACCTCTGTTTTCTCCGGCCAGCAGCTCCTTCTCCTCGCTGGGCAGGGGCTAACGGAGTTCAACGCCGAGACACTTGCCGGCGTCTACGAGATGAACGTGTGGCTTAATCTTCGGATAAGGTTGAAGTTCGGCGCCGTTAGGATCGGGAAGTTTAAGCCGAAGGTGAATTGTGAGTTCAAAGTTCCGTTGACTTCCGATGGAGGCTCAGTTACTTCGGTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTGAGTTAATTCGTCTTTTTCTTGGTCGTATTTCTTAGCTTTTGTTGTGAATCCATAAATTTATTTTATTTGTTTGTTGTTGTTCGTATTATTTTAATTCTAATTAATTTTGGCGATTAGCTATTTATATGGTGTATGAATAATTATAATAAAACTTTAGTATGGTTGGTTTTCTTATTTTTAGTTTAATTA ATGGGCAAGCATACCTACCACCGTCCGGACCACCACCACAGCCACCGAGGCTGCAGCTGCGGCGGTGGCTGCTTCATCACCTTTCTCAAGATCCTCATCACCATCGTCGTCATCGTTGGTCTCGCCGTGTTGATCTTATGGCTCATATTCCGTCCCAATAAAGTCAAATTCCAAGTCACCGACGCTAAACTCACCCAATTCAACCTCACCGATAACCAGCTCCATTATAACTTGGCCCTCAACGTCACCGTCAGAAATCCCAACAGACGAATCGGAGTCTACTACGATACCATCGAAGTCGCCGCCGTTTACAAAGACCAGCGCCTACAGACCCAGTGGCTGCCGCCGTTTTACCAAGGCTACAAGACAACCGCCGTCATCACCTCTGTTTTCTCCGGCCAGCAGCTCCTTCTCCTCGCTGGGCAGGGGCTAACGGAGTTCAACGCCGAGACACTTGCCGGCGTCTACGAGATGAACGTGTGGCTTAATCTTCGGATAAGGTTGAAGTTCGGCGCCGTTAGGATCGGGAAGTTTAAGCCGAAGGTGAATTGTGAGTTCAAAGTTCCGTTGACTTCCGATGGAGGCTCAGTTACTTCGGTGTTTCAGTCCACCGGCTGTGATATTGATTATTGGTGA MGKHTYHRPDHHHSHRGCSCGGGCFITFLKILITIVVIVGLAVLILWLIFRPNKVKFQVTDAKLTQFNLTDNQLHYNLALNVTVRNPNRRIGVYYDTIEVAAVYKDQRLQTQWLPPFYQGYKTTAVITSVFSGQQLLLLAGQGLTEFNAETLAGVYEMNVWLNLRIRLKFGAVRIGKFKPKVNCEFKVPLTSDGGSVTSVFQSTGCDIDYW
BLAST of Bhi11G002000 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.0e-44 Identity = 102/211 (48.34%), Postives = 139/211 (65.88%), Query Frame = 0
BLAST of Bhi11G002000 vs. Swiss-Prot
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.2e-42 Identity = 90/171 (52.63%), Postives = 115/171 (67.25%), Query Frame = 0
BLAST of Bhi11G002000 vs. Swiss-Prot
Match: sp|Q9SRN1|NHL2_ARATH (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.2e-34 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 0
BLAST of Bhi11G002000 vs. Swiss-Prot
Match: sp|Q9C615|SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana OX=3702 GN=SYP24 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of Bhi11G002000 vs. Swiss-Prot
Match: sp|Q9FI03|NHL26_ARATH (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.9e-14 Identity = 48/164 (29.27%), Postives = 88/164 (53.66%), Query Frame = 0
BLAST of Bhi11G002000 vs. TAIR10
Match: AT2G35980.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 181.4 bits (459), Expect = 5.7e-46 Identity = 102/211 (48.34%), Postives = 139/211 (65.88%), Query Frame = 0
BLAST of Bhi11G002000 vs. TAIR10
Match: AT5G06320.1 (NDR1/HIN1-like 3) HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43 Identity = 90/171 (52.63%), Postives = 115/171 (67.25%), Query Frame = 0
BLAST of Bhi11G002000 vs. TAIR10
Match: AT2G35460.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 148.7 bits (374), Expect = 4.1e-36 Identity = 71/173 (41.04%), Postives = 104/173 (60.12%), Query Frame = 0
BLAST of Bhi11G002000 vs. TAIR10
Match: AT3G11650.1 (NDR1/HIN1-like 2) HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35 Identity = 73/165 (44.24%), Postives = 99/165 (60.00%), Query Frame = 0
BLAST of Bhi11G002000 vs. TAIR10
Match: AT1G32270.1 (syntaxin, putative) HSP 1 Score: 110.9 bits (276), Expect = 9.5e-25 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 0
BLAST of Bhi11G002000 vs. TrEMBL
Match: tr|A0A0A0LE50|A0A0A0LE50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778990 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 1.1e-80 Identity = 157/211 (74.41%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of Bhi11G002000 vs. TrEMBL
Match: tr|A0A1S3B7J7|A0A1S3B7J7_CUCME (NDR1/HIN1-Like protein 3-like OS=Cucumis melo OX=3656 GN=LOC103486670 PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 3.3e-80 Identity = 155/211 (73.46%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of Bhi11G002000 vs. TrEMBL
Match: tr|A0A1S3B7L1|A0A1S3B7L1_CUCME (protein YLS9 OS=Cucumis melo OX=3656 GN=LOC103486671 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.0e-65 Identity = 124/184 (67.39%), Postives = 150/184 (81.52%), Query Frame = 0
BLAST of Bhi11G002000 vs. TrEMBL
Match: tr|A0A0A0LGS5|A0A0A0LGS5_CUCSA (Hairpin-inducing protein OS=Cucumis sativus OX=3659 GN=Csa_3G779010 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.3e-60 Identity = 117/184 (63.59%), Postives = 145/184 (78.80%), Query Frame = 0
BLAST of Bhi11G002000 vs. TrEMBL
Match: tr|A0A0A0LBJ4|A0A0A0LBJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G779020 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 9.3e-59 Identity = 110/170 (64.71%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of Bhi11G002000 vs. NCBI nr
Match: XP_022945227.1 (NDR1/HIN1-like protein 3 [Cucurbita moschata]) HSP 1 Score: 340.9 bits (873), Expect = 3.1e-90 Identity = 163/207 (78.74%), Postives = 184/207 (88.89%), Query Frame = 0
BLAST of Bhi11G002000 vs. NCBI nr
Match: XP_023005762.1 (NDR1/HIN1-like protein 10 [Cucurbita maxima]) HSP 1 Score: 340.5 bits (872), Expect = 4.1e-90 Identity = 163/207 (78.74%), Postives = 185/207 (89.37%), Query Frame = 0
BLAST of Bhi11G002000 vs. NCBI nr
Match: XP_011652030.1 (PREDICTED: protein YLS9-like [Cucumis sativus] >KGN59194.1 hypothetical protein Csa_3G778990 [Cucumis sativus]) HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80 Identity = 157/211 (74.41%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of Bhi11G002000 vs. NCBI nr
Match: XP_008442907.1 (PREDICTED: NDR1/HIN1-Like protein 3-like [Cucumis melo]) HSP 1 Score: 307.0 bits (785), Expect = 5.0e-80 Identity = 155/211 (73.46%), Postives = 167/211 (79.15%), Query Frame = 0
BLAST of Bhi11G002000 vs. NCBI nr
Match: XP_022144729.1 (NDR1/HIN1-like protein 10 [Momordica charantia]) HSP 1 Score: 296.2 bits (757), Expect = 8.8e-77 Identity = 142/186 (76.34%), Postives = 162/186 (87.10%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |