Bhi11G001859 (gene) Wax gourd

Overview
NameBhi11G001859
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 61206658 .. 61207689 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTAGGCAGTAAGGCAATAAAATATGTAGAAATTAAAAGAAATTCATTATAAGTTTGACTCGCATCGAGACATCAAGAAAATCAGTTAAAACGTAAATAAAAAGACCAGTCAACTCTTCAGTTACGCCGGCGATTCTTCCTATTTCTCTCCCTATTTTCCCCCTTCCTCTCCTCCATTCCCAAATCTCACACTCTTCATTCTCAAATCTCCGCCGTTAAATGTCGCAGCGACCGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTTATGGCCGCGGATTACCTCTCTGAACCGCCACCGCCGGCCGGACCAGGATCCAATGTTGAATCTGGCAGTCTGCACTCTAATCTCCTTACTCAGCCACCACAGCAGAGTCGCAGCGCTGATCCGACGGCGGTGGCGGTGGCGGCGGCAAGGCCTCCTGCTCCGGCACCGGTGAATGAAGCTCCGAATCCGGCGAGATAGCGGACTAAGGACTCAACGACGTCGTTTTGTTCGATCGCAATGAAGTGGAAGTAGGTTTTCATTTTCGATCTGTCGTTTTTTTTTTTTATATTTTGTGAAATTTGCTGTTAAATCTCAGTTTTTCATTTCGAATTATTAAAAAAAAAAAAAACTCAGTTTCTTTTTTATTTTTACAATATTTCTTTTCCTTTTTCTTTTTTTGGTATTTTTCTATGTTGACCCGAAGAAAGTGTGGTCTTTGCGTATCTTTGACGTTTTGTGAGCGGGAATCGGCGCTGCCAATGGGGACCAAATGGTTTTGATTAATTAAGCGGTGGTTTGGTTCGAACTAGGTTTATTTTGACATGTTAATATGTTCTTTTAATTTTAAATTTCCCCCCACTAAATCGATCAAATTATATCCTTTTTTTTTTTTTTTTTTTATCATTTCATCAAATTGCACTACAAATTCAATACGTTTGCAAGGGAAAAACAATATTTTAGCTAAGTTTTCCTAAAGTTTTGCAAATTTTGATAAACTTATTATATGATTAATATGTGTTTTGTTCAATTTTTAGTTTTG

mRNA sequence

AAATTAGGCAGTAAGGCAATAAAATATGTAGAAATTAAAAGAAATTCATTATAAGTTTGACTCGCATCGAGACATCAAGAAAATCAGTTAAAACGTAAATAAAAAGACCAGTCAACTCTTCAGTTACGCCGGCGATTCTTCCTATTTCTCTCCCTATTTTCCCCCTTCCTCTCCTCCATTCCCAAATCTCACACTCTTCATTCTCAAATCTCCGCCGTTAAATGTCGCAGCGACCGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTTATGGCCGCGGATTACCTCTCTGAACCGCCACCGCCGGCCGGACCAGGATCCAATGTTGAATCTGGCAGTCTGCACTCTAATCTCCTTACTCAGCCACCACAGCAGAGTCGCAGCGCTGATCCGACGGCGGTGGCGGTGGCGGCGGCAAGGCCTCCTGCTCCGGCACCGGTGAATGAAGCTCCGAATCCGGCGAGATAGCGGACTAAGGACTCAACGACGTCGTTTTGTTCGATCGCAATGAAGTGGAAGTAGGTTTTCATTTTCGATCTGTCGTTTTTTTTTTTTATATTTTGTGAAATTTGCTGTTAAATCTCAGTTTTTCATTTCGAATTATTAAAAAAAAAAAAAACTCAGTTTCTTTTTTATTTTTACAATATTTCTTTTCCTTTTTCTTTTTTTGGTATTTTTCTATGTTGACCCGAAGAAAGTGTGGTCTTTGCGTATCTTTGACGTTTTGTGAGCGGGAATCGGCGCTGCCAATGGGGACCAAATGGTTTTGATTAATTAAGCGGTGGTTTGGTTCGAACTAGGTTTATTTTGACATGTTAATATGTTCTTTTAATTTTAAATTTCCCCCCACTAAATCGATCAAATTATATCCTTTTTTTTTTTTTTTTTTTATCATTTCATCAAATTGCACTACAAATTCAATACGTTTGCAAGGGAAAAACAATATTTTAGCTAAGTTTTCCTAAAGTTTTGCAAATTTTGATAAACTTATTATATGATTAATATGTGTTTTGTTCAATTTTTAGTTTTG

Coding sequence (CDS)

ATGTCGCAGCGACCGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTTATGGCCGCGGATTACCTCTCTGAACCGCCACCGCCGGCCGGACCAGGATCCAATGTTGAATCTGGCAGTCTGCACTCTAATCTCCTTACTCAGCCACCACAGCAGAGTCGCAGCGCTGATCCGACGGCGGTGGCGGTGGCGGCGGCAAGGCCTCCTGCTCCGGCACCGGTGAATGAAGCTCCGAATCCGGCGAGATAG

Protein sequence

MSQRPGRHQRRPSQGVFMAADYLSEPPPPAGPGSNVESGSLHSNLLTQPPQQSRSADPTAVAVAAARPPAPAPVNEAPNPAR
Homology
[Close]
BLAST of Bhi11G001859 vs. TrEMBL
Match: tr|A0A0A0LAM0|A0A0A0LAM0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734895 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.3e-19
Identity = 55/82 (67.07%), Postives = 59/82 (71.95%), Query Frame = 0 

Query: 1  MSQRPGRHQRRPSQGVFMAADYLSEPPPPAGPGSNVESGSLHSN-LLTQPPQQSRSADPT 60
          MSQRP RHQRRPSQGVFM ADYLS+PPPP GPGS VESG  HS+ LLT+P QQSRSADP 
Sbjct: 1  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPV 60

Query: 61 AVXXXXXXXXXXXXVNEAPNPA 82
          A              N+APNPA
Sbjct: 61 AARPPAPPAVAN---NDAPNPA 79

[Close]
BLAST of Bhi11G001859 vs. NCBI nr
Match: KGN58888.1 (hypothetical protein Csa_3G734895 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 9.5e-19
Identity = 55/82 (67.07%), Postives = 59/82 (71.95%), Query Frame = 0 

Query: 1  MSQRPGRHQRRPSQGVFMAADYLSEPPPPAGPGSNVESGSLHSN-LLTQPPQQSRSADPT 60
          MSQRP RHQRRPSQGVFM ADYLS+PPPP GPGS VESG  HS+ LLT+P QQSRSADP 
Sbjct: 1  MSQRPSRHQRRPSQGVFMPADYLSDPPPPVGPGSTVESGGPHSSTLLTRPTQQSRSADPV 60

Query: 61 AVXXXXXXXXXXXXVNEAPNPA 82
          A              N+APNPA
Sbjct: 61 AARPPAPPAVAN---NDAPNPA 79

The following BLAST results are available for this feature:
BLAST of Bhi11G001859 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G001859 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G001859 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAM0|A0A0A0LAM0_CUCSA6.3e-1967.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734895 PE=4 SV=1[more]
BLAST of Bhi11G001859 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58888.19.5e-1967.07hypothetical protein Csa_3G734895 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M001859Bhi11M001859mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..82

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi11G001859MELO3C009274Melon (DHL92) v3.5.1mewgoB373
Bhi11G001859ClCG10G020960Watermelon (Charleston Gray)wcgwgoB079
Bhi11G001859CSPI03G32460Wild cucumber (PI 183967)cpiwgoB237
Bhi11G001859Cucsa.175310Cucumber (Gy14) v1cgywgoB358
Bhi11G001859CmaCh14G001660Cucurbita maxima (Rimu)cmawgoB0298
Bhi11G001859CmaCh06G003110Cucurbita maxima (Rimu)cmawgoB0986
Bhi11G001859CmoCh06G003130Cucurbita moschata (Rifu)cmowgoB0983
Bhi11G001859Lsi03G020900Bottle gourd (USVL1VR-Ls)lsiwgoB293
Bhi11G001859MELO3C009274.2Melon (DHL92) v3.6.1medwgoB374
Bhi11G001859CsaV3_3G035050Cucumber (Chinese Long) v3cucwgoB240
Bhi11G001859Cla017881Watermelon (97103) v1wgowmB008
Bhi11G001859Cla97C10G204190Watermelon (97103) v2wgowmbB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G001859Wax gourdwgowgoB006
Bhi11G001859Wax gourdwgowgoB012
Bhi11G001859Cucumber (Gy14) v1cgywgoB062
Bhi11G001859Cucumber (Gy14) v1cgywgoB330
Bhi11G001859Cucumber (Gy14) v2cgybwgoB225
Bhi11G001859Cucumber (Gy14) v2cgybwgoB343
Bhi11G001859Cucumber (Gy14) v2cgybwgoB409
Bhi11G001859Cucumber (Gy14) v2cgybwgoB508
Bhi11G001859Cucurbita maxima (Rimu)cmawgoB0675
Bhi11G001859Cucurbita maxima (Rimu)cmawgoB0709
Bhi11G001859Cucurbita maxima (Rimu)cmawgoB0776
Bhi11G001859Cucurbita maxima (Rimu)cmawgoB0825
Bhi11G001859Cucurbita maxima (Rimu)cmawgoB0824
Bhi11G001859Cucurbita maxima (Rimu)cmawgoB1044
Bhi11G001859Cucurbita moschata (Rifu)cmowgoB0287
Bhi11G001859Cucurbita moschata (Rifu)cmowgoB0672
Bhi11G001859Cucurbita moschata (Rifu)cmowgoB0702
Bhi11G001859Cucurbita moschata (Rifu)cmowgoB0769
Bhi11G001859Cucurbita moschata (Rifu)cmowgoB0820
Bhi11G001859Cucurbita moschata (Rifu)cmowgoB0821
Bhi11G001859Cucurbita moschata (Rifu)cmowgoB1037
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB0065
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB0345
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB0487
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB0488
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB0584
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB0750
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB0907
Bhi11G001859Cucurbita pepo (Zucchini)cpewgoB1073
Bhi11G001859Wild cucumber (PI 183967)cpiwgoB359
Bhi11G001859Wild cucumber (PI 183967)cpiwgoB435
Bhi11G001859Wild cucumber (PI 183967)cpiwgoB536
Bhi11G001859Cucumber (Chinese Long) v3cucwgoB361
Bhi11G001859Cucumber (Chinese Long) v3cucwgoB444
Bhi11G001859Cucumber (Chinese Long) v3cucwgoB548
Bhi11G001859Cucumber (Chinese Long) v2cuwgoB235
Bhi11G001859Cucumber (Chinese Long) v2cuwgoB357
Bhi11G001859Cucumber (Chinese Long) v2cuwgoB433
Bhi11G001859Cucumber (Chinese Long) v2cuwgoB532
Bhi11G001859Bottle gourd (USVL1VR-Ls)lsiwgoB059
Bhi11G001859Bottle gourd (USVL1VR-Ls)lsiwgoB147
Bhi11G001859Bottle gourd (USVL1VR-Ls)lsiwgoB347
Bhi11G001859Melon (DHL92) v3.6.1medwgoB050
Bhi11G001859Melon (DHL92) v3.6.1medwgoB092
Bhi11G001859Melon (DHL92) v3.6.1medwgoB620
Bhi11G001859Melon (DHL92) v3.5.1mewgoB050
Bhi11G001859Melon (DHL92) v3.5.1mewgoB091
Bhi11G001859Melon (DHL92) v3.5.1mewgoB615
Bhi11G001859Watermelon (Charleston Gray)wcgwgoB257
Bhi11G001859Watermelon (Charleston Gray)wcgwgoB377
Bhi11G001859Watermelon (Charleston Gray)wcgwgoB554
Bhi11G001859Watermelon (97103) v2wgowmbB031
Bhi11G001859Watermelon (97103) v2wgowmbB038
Bhi11G001859Watermelon (97103) v2wgowmbB043
Bhi11G001859Watermelon (97103) v1wgowmB043
Bhi11G001859Watermelon (97103) v1wgowmB051
Bhi11G001859Watermelon (97103) v1wgowmB052
Bhi11G001859Silver-seed gourdcarwgoB0196
Bhi11G001859Silver-seed gourdcarwgoB0391
Bhi11G001859Silver-seed gourdcarwgoB0416
Bhi11G001859Silver-seed gourdcarwgoB0573
Bhi11G001859Silver-seed gourdcarwgoB1070
Bhi11G001859Silver-seed gourdcarwgoB1167