Bhi11G001813 (gene) Wax gourd

Overview
NameBhi11G001813
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 60190561 .. 60190872 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCCATAGGCGTTTCCCGTGCTCTTCCAAAAGAAGCATCTAGAAATGACTTGACATGGGCTTATGCGATGAAGAATGATTTTCTCGGGAAAAAATTTTGTGCTTATGTGGATGGGTCACTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTACTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCATATACATCGTCACCTCTTTTGCGACCACTAAAGATATTTGGGCCGTAGTGCTTTTCGATCTTAGGGTTGGTTCTGTCTGTACGCGAGAATGA

mRNA sequence

ATGGATTCCATAGGCGTTTCCCGTGCTCTTCCAAAAGAAGCATCTAGAAATGACTTGACATGGGCTTATGCGATGAAGAATGATTTTCTCGGGAAAAAATTTTGTGCTTATGTGGATGGGTCACTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTACTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCATATACATCGTCACCTCTTTTGCGACCACTAAAGATATTTGGGCCGTAGTGCTTTTCGATCTTAGGGTTGGTTCTGTCTGTACGCGAGAATGA

Coding sequence (CDS)

ATGGATTCCATAGGCGTTTCCCGTGCTCTTCCAAAAGAAGCATCTAGAAATGACTTGACATGGGCTTATGCGATGAAGAATGATTTTCTCGGGAAAAAATTTTGTGCTTATGTGGATGGGTCACTTCAATTTCCCAAGACTCGAGAAGGATATTTTCCTACAAAAGATGAAAAGTACTTAGCTTCAAATGAGATGACTTGTGTACTTCCTTTGAGCCCCATATACATCGTCACCTCTTTTGCGACCACTAAAGATATTTGGGCCGTAGTGCTTTTCGATCTTAGGGTTGGTTCTGTCTGTACGCGAGAATGA

Protein sequence

MDSIGVSRALPKEASRNDLTWAYAMKNDFLGKKFCAYVDGSLQFPKTREGYFPTKDEKYLASNEMTCVLPLSPIYIVTSFATTKDIWAVVLFDLRVGSVCTRE
Homology
[Close]
BLAST of Bhi11G001813 vs. TrEMBL
Match: tr|A0A2N9G8J8|A0A2N9G8J8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26859 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 72/87 (82.76%), Postives = 74/87 (85.06%), Query Frame = 0 

Query: 1   MDSIGVSRALPKEASRNDLTWAYAMKNDFLGKKFCAYVDGSLQFPKTREGYFPTKDEKYL 60
           MDSIG SRALPKEAS NDL+WAYAMKND LGKK CAYV GSLQF KTREG FPTKDEK L
Sbjct: 305 MDSIGFSRALPKEASGNDLSWAYAMKNDLLGKKSCAYVGGSLQFSKTREGDFPTKDEKCL 364

Query: 61  ASNEMTCVLPLSPIYIVTSFATTKDIW 88
           A N M CVLPLSPIY VTSFAT K+IW
Sbjct: 365 ALNGMPCVLPLSPIYTVTSFATAKEIW 391

[Close]
BLAST of Bhi11G001813 vs. TrEMBL
Match: tr|A0A0D2PZN2|A0A0D2PZN2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G162300 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.7e-08
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 6   VSRALPKEASRNDLTWAYAMKNDFLGKKFCAYVDGSL 43
           +SRALPKEAS NDL+WAYAMKND  GK  CAYVDGSL
Sbjct: 647 LSRALPKEASGNDLSWAYAMKNDLRGKNSCAYVDGSL 683

[Close]
BLAST of Bhi11G001813 vs. TrEMBL
Match: tr|A0A2G3B6G0|A0A2G3B6G0_CAPCH (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_27326 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-06
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 1  MDSIGVSRALPKEASRNDLTWAYAMKNDFLGKK 34
          MDSIG SRAL KEAS NDL+WAYAMKND LGKK
Sbjct: 1  MDSIGFSRALLKEASGNDLSWAYAMKNDLLGKK 33

[Close]
BLAST of Bhi11G001813 vs. NCBI nr
Match: KJB09756.1 (hypothetical protein B456_001G162300 [Gossypium raimondii])

HSP 1 Score: 66.6 bits (161), Expect = 5.5e-08
Identity = 30/37 (81.08%), Postives = 32/37 (86.49%), Query Frame = 0 

Query: 6   VSRALPKEASRNDLTWAYAMKNDFLGKKFCAYVDGSL 43
           +SRALPKEAS NDL+WAYAMKND  GK  CAYVDGSL
Sbjct: 647 LSRALPKEASGNDLSWAYAMKNDLRGKNSCAYVDGSL 683

[Close]
BLAST of Bhi11G001813 vs. NCBI nr
Match: PHU02075.1 (hypothetical protein BC332_27326 [Capsicum chinense])

HSP 1 Score: 59.3 bits (142), Expect = 8.8e-06
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0 

Query: 1  MDSIGVSRALPKEASRNDLTWAYAMKNDFLGKK 34
          MDSIG SRAL KEAS NDL+WAYAMKND LGKK
Sbjct: 1  MDSIGFSRALLKEASGNDLSWAYAMKNDLLGKK 33

The following BLAST results are available for this feature:
BLAST of Bhi11G001813 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G001813 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G001813 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2N9G8J8|A0A2N9G8J8_FAGSY1.3e-3282.76Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26859 PE=4 SV=1[more]
tr|A0A0D2PZN2|A0A0D2PZN2_GOSRA3.7e-0881.08Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G162300 PE=4 ... [more]
tr|A0A2G3B6G0|A0A2G3B6G0_CAPCH5.9e-0684.85Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_27326 PE=4 SV=1[more]
BLAST of Bhi11G001813 vs. NCBI nr
Match NameE-valueIdentityDescription
KJB09756.15.5e-0881.08hypothetical protein B456_001G162300 [Gossypium raimondii][more]
PHU02075.18.8e-0684.85hypothetical protein BC332_27326 [Capsicum chinense][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M001813Bhi11M001813mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G001813Cucumber (Chinese Long) v2cuwgoB528
Bhi11G001813Bottle gourd (USVL1VR-Ls)lsiwgoB059
Bhi11G001813Bottle gourd (USVL1VR-Ls)lsiwgoB147
Bhi11G001813Bottle gourd (USVL1VR-Ls)lsiwgoB347
Bhi11G001813Melon (DHL92) v3.6.1medwgoB048
Bhi11G001813Melon (DHL92) v3.6.1medwgoB093
Bhi11G001813Melon (DHL92) v3.6.1medwgoB374
Bhi11G001813Melon (DHL92) v3.6.1medwgoB447
Bhi11G001813Melon (DHL92) v3.5.1mewgoB050
Bhi11G001813Melon (DHL92) v3.5.1mewgoB092
Bhi11G001813Melon (DHL92) v3.5.1mewgoB373
Bhi11G001813Melon (DHL92) v3.5.1mewgoB444
Bhi11G001813Watermelon (Charleston Gray)wcgwgoB079
Bhi11G001813Watermelon (Charleston Gray)wcgwgoB257
Bhi11G001813Watermelon (Charleston Gray)wcgwgoB258
Bhi11G001813Watermelon (Charleston Gray)wcgwgoB377
Bhi11G001813Watermelon (97103) v2wgowmbB002
Bhi11G001813Watermelon (97103) v2wgowmbB031
Bhi11G001813Watermelon (97103) v2wgowmbB032
Bhi11G001813Watermelon (97103) v2wgowmbB038
Bhi11G001813Watermelon (97103) v1wgowmB008
Bhi11G001813Watermelon (97103) v1wgowmB051
Bhi11G001813Watermelon (97103) v1wgowmB052
Bhi11G001813Watermelon (97103) v1wgowmB053
Bhi11G001813Silver-seed gourdcarwgoB0196
Bhi11G001813Silver-seed gourdcarwgoB0391
Bhi11G001813Silver-seed gourdcarwgoB0974
Bhi11G001813Silver-seed gourdcarwgoB1167
Bhi11G001813Bottle gourd (USVL1VR-Ls)lsiwgoB293
Bhi11G001813Wax gourdwgowgoB006
Bhi11G001813Wax gourdwgowgoB012
Bhi11G001813Wax gourdwgowgoB017
Bhi11G001813Cucumber (Gy14) v1cgywgoB062
Bhi11G001813Cucumber (Gy14) v1cgywgoB330
Bhi11G001813Cucumber (Gy14) v1cgywgoB610
Bhi11G001813Cucumber (Gy14) v2cgybwgoB225
Bhi11G001813Cucumber (Gy14) v2cgybwgoB343
Bhi11G001813Cucumber (Gy14) v2cgybwgoB408
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB0298
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB0674
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB0709
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB0771
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB0825
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB0824
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB0986
Bhi11G001813Cucurbita maxima (Rimu)cmawgoB1044
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB0287
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB0672
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB0702
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB0764
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB0820
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB0821
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB0983
Bhi11G001813Cucurbita moschata (Rifu)cmowgoB1037
Bhi11G001813Cucurbita pepo (Zucchini)cpewgoB0067
Bhi11G001813Cucurbita pepo (Zucchini)cpewgoB0345
Bhi11G001813Cucurbita pepo (Zucchini)cpewgoB0487
Bhi11G001813Cucurbita pepo (Zucchini)cpewgoB0584
Bhi11G001813Cucurbita pepo (Zucchini)cpewgoB0750
Bhi11G001813Cucurbita pepo (Zucchini)cpewgoB0907
Bhi11G001813Cucurbita pepo (Zucchini)cpewgoB1073
Bhi11G001813Wild cucumber (PI 183967)cpiwgoB237
Bhi11G001813Wild cucumber (PI 183967)cpiwgoB359
Bhi11G001813Wild cucumber (PI 183967)cpiwgoB434
Bhi11G001813Wild cucumber (PI 183967)cpiwgoB531
Bhi11G001813Cucumber (Chinese Long) v3cucwgoB240
Bhi11G001813Cucumber (Chinese Long) v3cucwgoB542
Bhi11G001813Cucumber (Chinese Long) v3cucwgoB361
Bhi11G001813Cucumber (Chinese Long) v3cucwgoB443
Bhi11G001813Cucumber (Chinese Long) v2cuwgoB235
Bhi11G001813Cucumber (Chinese Long) v2cuwgoB357
Bhi11G001813Cucumber (Chinese Long) v2cuwgoB432