Bhi11G001630 (gene) Wax gourd

Overview
NameBhi11G001630
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 55139741 .. 55140007 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACACACGGAGGGAGATAGTAAGCTACGAGATTCCAACGCCAAACATAGGAATCCACAGGTTTGTTTTTGTTCTATTCAAGCAGAAACGAAGACAGTCAGTGAATCCATCCTCTTCAAGGGATTATTTCAACACCCGAGCCTTTGCCGCCGACAACGATCTGGGTCTCCCCGTCACGGCCATCTACTTCAATGCCCAAAGAGAAACTGCCACCAGACGGCGCTAAAACCACCGTTTGGCGACAGTCCGAGTGAACCAAAATAG

mRNA sequence

ATGAAACACACGGAGGGAGATAGTAAGCTACGAGATTCCAACGCCAAACATAGGAATCCACAGGTTTGTTTTTGTTCTATTCAAGCAGAAACGAAGACAGTCAGTGAATCCATCCTCTTCAAGGGATTATTTCAACACCCGAGCCTTTGCCGCCGACAACGATCTGGGTCTCCCCGTCACGGCCATCTACTTCAATGCCCAAAGAGAAACTGCCACCAGACGGCGCTAAAACCACCGTTTGGCGACAGTCCGAGTGAACCAAAATAG

Coding sequence (CDS)

ATGAAACACACGGAGGGAGATAGTAAGCTACGAGATTCCAACGCCAAACATAGGAATCCACAGGTTTGTTTTTGTTCTATTCAAGCAGAAACGAAGACAGTCAGTGAATCCATCCTCTTCAAGGGATTATTTCAACACCCGAGCCTTTGCCGCCGACAACGATCTGGGTCTCCCCGTCACGGCCATCTACTTCAATGCCCAAAGAGAAACTGCCACCAGACGGCGCTAAAACCACCGTTTGGCGACAGTCCGAGTGAACCAAAATAG

Protein sequence

MKHTEGDSKLRDSNAKHRNPQVCFCSIQAETKTVSESILFKGLFQHPSLCRRQRSGSPRHGHLLQCPKRNCHQTALKPPFGDSPSEPK
Homology
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BLAST of Bhi11G001630 vs. NCBI nr
Match: XP_022860277.1 (protein SELF-PRUNING-like isoform X2 [Olea europaea var. sylvestris])

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0 

Query: 3   HTEGDSKLRDSNAKHRNPQVCFCSIQAETKTVSESILFKGLFQHPSLCRRQRSGSPRHGH 62
           H +G SKLRD  A++R PQVC  S  A+++T  +S  F+G  QH   C R++ G P    
Sbjct: 86  HWKGISKLRDPEAEYRYPQVCVRSFPADSQTNCKSTCFEGSLQHSKFCCREQFGPPSCCR 145

Query: 63  LLQCPKR 70
            LQC  R
Sbjct: 146 FLQCTAR 152

The following BLAST results are available for this feature:
BLAST of Bhi11G001630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G001630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G001630 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi11G001630 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022860277.12.2e-0543.28protein SELF-PRUNING-like isoform X2 [Olea europaea var. sylvestris][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M001630Bhi11M001630mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G001630Melon (DHL92) v3.6.1medwgoB390
Bhi11G001630Melon (DHL92) v3.5.1mewgoB388
Bhi11G001630Watermelon (Charleston Gray)wcgwgoB107
Bhi11G001630Watermelon (97103) v2wgowmbB027
Bhi11G001630Silver-seed gourdcarwgoB0188
Bhi11G001630Silver-seed gourdcarwgoB0324
Bhi11G001630Cucumber (Gy14) v2cgybwgoB224
Bhi11G001630Cucurbita maxima (Rimu)cmawgoB0296
Bhi11G001630Cucurbita moschata (Rifu)cmowgoB0286
Bhi11G001630Cucumber (Chinese Long) v3cucwgoB238
Bhi11G001630Bottle gourd (USVL1VR-Ls)lsiwgoB308