Bhi11G001445 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G001445
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Leukocyte immunoglobulin-like receptor subfamily A member
Location	chr11 : 49110891 .. 49111259 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTGATTAAGAAGTTTGGGGATGAACACAGCAAATTGTTGGACCAATACGAGATATTGAGCTTTGAAGCGCGGCTAAACCAAGCAATGTTGGAGAGGAGTCTCTCAGAGCCGAGGACGCTGAGGTCTCAACCGCGGGCTCTATTCGCTGGCTCTGGCTTAGACTCAGGCTTAGTTCAACTACCATACTTGGTAACCACTACTAATCATCCCAAAAAAGGACGCCGTGGATCCACATTCAACTTCAAGAACATACTCAACAAGTTACTCAAACCCATTTTGGAGAGGAATAGTACAAAGAAGGAACTCCCACATTCCAGAAACTCCATGTCCTGGAAAACCCTCAGTAAATCCATGCGCCTTTGA

mRNA sequence

ATGGCAGTGATTAAGAAGTTTGGGGATGAACACAGCAAATTGTTGGACCAATACGAGATATTGAGCTTTGAAGCGCGGCTAAACCAAGCAATGTTGGAGAGGAGTCTCTCAGAGCCGAGGACGCTGAGGTCTCAACCGCGGGCTCTATTCGCTGGCTCTGGCTTAGACTCAGGCTTAGTTCAACTACCATACTTGGTAACCACTACTAATCATCCCAAAAAAGGACGCCGTGGATCCACATTCAACTTCAAGAACATACTCAACAAGTTACTCAAACCCATTTTGGAGAGGAATAGTACAAAGAAGGAACTCCCACATTCCAGAAACTCCATGTCCTGGAAAACCCTCAGTAAATCCATGCGCCTTTGA

Coding sequence (CDS)

ATGGCAGTGATTAAGAAGTTTGGGGATGAACACAGCAAATTGTTGGACCAATACGAGATATTGAGCTTTGAAGCGCGGCTAAACCAAGCAATGTTGGAGAGGAGTCTCTCAGAGCCGAGGACGCTGAGGTCTCAACCGCGGGCTCTATTCGCTGGCTCTGGCTTAGACTCAGGCTTAGTTCAACTACCATACTTGGTAACCACTACTAATCATCCCAAAAAAGGACGCCGTGGATCCACATTCAACTTCAAGAACATACTCAACAAGTTACTCAAACCCATTTTGGAGAGGAATAGTACAAAGAAGGAACTCCCACATTCCAGAAACTCCATGTCCTGGAAAACCCTCAGTAAATCCATGCGCCTTTGA

Protein sequence

MAVIKKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTLRSQPRALFAGSGLDSGLVQLPYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILERNSTKKELPHSRNSMSWKTLSKSMRL

Homology

[Close]

BLAST of Bhi11G001445 vs. TrEMBL
Match: tr|A0A2C9VA13|A0A2C9VA13_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G117900 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.8e-15
Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 3   VIKKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTLRSQPRALFAGSGLDSGLVQL 62
           ++K+FGDE S LLDQ+E L+FE +LNQA+L RSLSEP   RS+ +    G          
Sbjct: 7   ILKRFGDEQSTLLDQFERLTFEVQLNQAILGRSLSEPSVGRSRFQVPLNGE-------DP 66

Query: 63  PYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILER-NSTKKELPHSRNSMSWKTLSKSMR 122
           P LVT     ++ RRGS FN   +L KLLKPI  R +  KKE+   +N  SWK  S+S+R
Sbjct: 67  PALVTQVRQGRRRRRGSGFN--KVLMKLLKPIFRRKDGAKKEVLDPKNPKSWKAFSRSLR 118

[Close]

BLAST of Bhi11G001445 vs. TrEMBL
Match: tr|A0A1U8HUZ0|A0A1U8HUZ0_GOSHI (uncharacterized protein LOC107888144 OS=Gossypium hirsutum OX=3635 GN=LOC107888144 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14
Identity = 61/123 (49.59%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 3   VIKKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTL-RSQPRALFAGSGLDSGLVQ 62
           V+++FGDE S LLDQ+E LSFE +LNQA+L RSLSEP    RSQ  + F           
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRSLSEPSVAKRSQYCSQFQAP-------- 75

Query: 63  LPYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILER--NSTKKELPHSRNSMSWKTLSKS 122
            P  V      +KGRRGS FN   +L KLLKPIL R  N+ KK +   +N MSWK  S+S
Sbjct: 76  -PPAVKPKG--RKGRRGSGFN--RVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFSRS 125

[Close]

BLAST of Bhi11G001445 vs. TrEMBL
Match: tr|A0A0B2PW06|A0A0B2PW06_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_043720 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-14
Identity = 56/122 (45.90%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 5   KKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTLR--SQPRALFAGSGLDSGLVQL 64
           K+FGDE S LLDQ+E LSFE  LN+AML+RSLSEP   R  SQPR +             
Sbjct: 21  KRFGDEQSTLLDQFERLSFETHLNKAMLQRSLSEPGFPRRVSQPRHVNV----------T 80

Query: 65  PYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILERNST---KKELPHSRNSMSWKTLSKS 122
           P  +   N+  K RR     F  +L KLL+PIL R S+   +K  P  RN +SWK  S+S
Sbjct: 81  PTTIPLLNNQGKQRRCRVSGFNKVLKKLLRPILGRKSSGGERKHAPDPRNPLSWKNFSRS 132

[Close]

BLAST of Bhi11G001445 vs. TrEMBL
Match: tr|A0A2P5YSV3|A0A2P5YSV3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA01904 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-14
Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 3   VIKKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTL-RSQPRALFAGSGLDSGLVQ 62
           V+++FGDE S LLDQ+E LSFE +LNQA+L R+LSEP    RSQ  + F           
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRTLSEPSVAKRSQYCSQFQAP-------- 75

Query: 63  LPYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILER--NSTKKELPHSRNSMSWKTLSKS 122
            P  V      +KGRRGS FN   +L KLLKPIL R  N+ KK +   +N MSWK  S+S
Sbjct: 76  -PPAVKPKG--RKGRRGSGFN--RVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFSRS 125

[Close]

BLAST of Bhi11G001445 vs. TrEMBL
Match: tr|A0A1J7H346|A0A1J7H346_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_06294 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.3e-14
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 5   KKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTLRSQPRALFAGSGLDSGLVQLPY 64
           K+FGDE S LLDQ+E LSFEA LN+AM +RSLSEP   RS  ++ F  +   S    +P 
Sbjct: 21  KRFGDEQSTLLDQFERLSFEAHLNKAMFQRSLSEPGLPRSCTQSRFISNVAPS----IP- 80

Query: 65  LVTTTNHPKKGRRGSTFNFKNILNKLLKPILER-NSTKKELPHSRNSMSWKTLSKSMR 122
           +VT   H   G+R S   F  +L  LLKPIL R   T+K +P  ++ +SWK  S+S+R
Sbjct: 81  MVTQVKH---GKRPSGSRFYKVLKNLLKPILGRKGGTRKHVPDHKDPLSWKNFSRSLR 130

[Close]

BLAST of Bhi11G001445 vs. NCBI nr
Match: OAY41638.1 (hypothetical protein MANES_09G117900 [Manihot esculenta])

HSP 1 Score: 89.7 bits (221), Expect = 7.2e-15
Identity = 56/121 (46.28%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 3   VIKKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTLRSQPRALFAGSGLDSGLVQL 62
           ++K+FGDE S LLDQ+E L+FE +LNQA+L RSLSEP   RS+ +    G          
Sbjct: 7   ILKRFGDEQSTLLDQFERLTFEVQLNQAILGRSLSEPSVGRSRFQVPLNGE-------DP 66

Query: 63  PYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILER-NSTKKELPHSRNSMSWKTLSKSMR 122
           P LVT     ++ RRGS FN   +L KLLKPI  R +  KKE+   +N  SWK  S+S+R
Sbjct: 67  PALVTQVRQGRRRRRGSGFN--KVLMKLLKPIFRRKDGAKKEVLDPKNPKSWKAFSRSLR 118

[Close]

BLAST of Bhi11G001445 vs. NCBI nr
Match: XP_016667768.1 (PREDICTED: uncharacterized protein LOC107888144 [Gossypium hirsutum] >XP_017646749.1 PREDICTED: uncharacterized protein LOC108487042 [Gossypium arboreum])

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-14
Identity = 61/123 (49.59%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 3   VIKKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTL-RSQPRALFAGSGLDSGLVQ 62
           V+++FGDE S LLDQ+E LSFE +LNQA+L RSLSEP    RSQ  + F           
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRSLSEPSVAKRSQYCSQFQAP-------- 75

Query: 63  LPYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILER--NSTKKELPHSRNSMSWKTLSKS 122
            P  V      +KGRRGS FN   +L KLLKPIL R  N+ KK +   +N MSWK  S+S
Sbjct: 76  -PPAVKPKG--RKGRRGSGFN--RVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFSRS 125

[Close]

BLAST of Bhi11G001445 vs. NCBI nr
Match: KHN11869.1 (hypothetical protein glysoja_043720 [Glycine soja])

HSP 1 Score: 87.0 bits (214), Expect = 4.7e-14
Identity = 56/122 (45.90%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 5   KKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTLR--SQPRALFAGSGLDSGLVQL 64
           K+FGDE S LLDQ+E LSFE  LN+AML+RSLSEP   R  SQPR +             
Sbjct: 21  KRFGDEQSTLLDQFERLSFETHLNKAMLQRSLSEPGFPRRVSQPRHVNV----------T 80

Query: 65  PYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILERNST---KKELPHSRNSMSWKTLSKS 122
           P  +   N+  K RR     F  +L KLL+PIL R S+   +K  P  RN +SWK  S+S
Sbjct: 81  PTTIPLLNNQGKQRRCRVSGFNKVLKKLLRPILGRKSSGGERKHAPDPRNPLSWKNFSRS 132

[Close]

BLAST of Bhi11G001445 vs. NCBI nr
Match: PPS18674.1 (hypothetical protein GOBAR_AA01904 [Gossypium barbadense])

HSP 1 Score: 86.7 bits (213), Expect = 6.1e-14
Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 3   VIKKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTL-RSQPRALFAGSGLDSGLVQ 62
           V+++FGDE S LLDQ+E LSFE +LNQA+L R+LSEP    RSQ  + F           
Sbjct: 16  VLRRFGDEQSTLLDQFERLSFEVQLNQAILSRTLSEPSVAKRSQYCSQFQAP-------- 75

Query: 63  LPYLVTTTNHPKKGRRGSTFNFKNILNKLLKPILER--NSTKKELPHSRNSMSWKTLSKS 122
            P  V      +KGRRGS FN   +L KLLKPIL R  N+ KK +   +N MSWK  S+S
Sbjct: 76  -PPAVKPKG--RKGRRGSGFN--RVLKKLLKPILGRKGNAGKKPVADPQNPMSWKAFSRS 125

[Close]

BLAST of Bhi11G001445 vs. NCBI nr
Match: OIW00914.1 (hypothetical protein TanjilG_06294 [Lupinus angustifolius])

HSP 1 Score: 86.3 bits (212), Expect = 8.0e-14
Identity = 55/118 (46.61%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 5   KKFGDEHSKLLDQYEILSFEARLNQAMLERSLSEPRTLRSQPRALFAGSGLDSGLVQLPY 64
           K+FGDE S LLDQ+E LSFEA LN+AM +RSLSEP   RS  ++ F  +   S    +P 
Sbjct: 21  KRFGDEQSTLLDQFERLSFEAHLNKAMFQRSLSEPGLPRSCTQSRFISNVAPS----IP- 80

Query: 65  LVTTTNHPKKGRRGSTFNFKNILNKLLKPILER-NSTKKELPHSRNSMSWKTLSKSMR 122
           +VT   H   G+R S   F  +L  LLKPIL R   T+K +P  ++ +SWK  S+S+R
Sbjct: 81  MVTQVKH---GKRPSGSRFYKVLKNLLKPILGRKGGTRKHVPDHKDPLSWKNFSRSLR 130

The following BLAST results are available for this feature:

BLAST of Bhi11G001445 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G001445 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi11G001445 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2C9VA13\|A0A2C9VA13_MANES	4.8e-15	46.28	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G117900 PE=4 SV=...	[more]
tr\|A0A1U8HUZ0\|A0A1U8HUZ0_GOSHI	1.8e-14	49.59	uncharacterized protein LOC107888144 OS=Gossypium hirsutum OX=3635 GN=LOC1078881...	[more]
tr\|A0A0B2PW06\|A0A0B2PW06_GLYSO	3.1e-14	45.90	Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_043720 PE=4 SV=1	[more]
tr\|A0A2P5YSV3\|A0A2P5YSV3_GOSBA	4.1e-14	48.78	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA01904 PE=4 SV...	[more]
tr\|A0A1J7H346\|A0A1J7H346_LUPAN	5.3e-14	46.61	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_06294 PE=4 S...	[more]

BLAST of Bhi11G001445 vs. NCBI nr


Match Name	E-value	Identity	Description
OAY41638.1	7.2e-15	46.28	hypothetical protein MANES_09G117900 [Manihot esculenta]	[more]
XP_016667768.1	2.8e-14	49.59	PREDICTED: uncharacterized protein LOC107888144 [Gossypium hirsutum] >XP_0176467...	[more]
KHN11869.1	4.7e-14	45.90	hypothetical protein glysoja_043720 [Glycine soja]	[more]
PPS18674.1	6.1e-14	48.78	hypothetical protein GOBAR_AA01904 [Gossypium barbadense]	[more]
OIW00914.1	8.0e-14	46.61	hypothetical protein TanjilG_06294 [Lupinus angustifolius]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M001445	Bhi11M001445	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G001445	Csa3G728070	Cucumber (Chinese Long) v2	cuwgoB219
Bhi11G001445	ClCG10G022740	Watermelon (Charleston Gray)	wcgwgoB093
Bhi11G001445	Cp4.1LG03g03540	Cucurbita pepo (Zucchini)	cpewgoB0744
Bhi11G001445	CsaV3_3G033090	Cucumber (Chinese Long) v3	cucwgoB224
Bhi11G001445	Cla018051	Watermelon (97103) v1	wgowmB020
Bhi11G001445	Cla97C10G206150	Watermelon (97103) v2	wgowmbB014

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G001445	Wax gourd	wgowgoB015
Bhi11G001445	Cucumber (Gy14) v1	cgywgoB246
Bhi11G001445	Cucumber (Gy14) v1	cgywgoB359
Bhi11G001445	Cucumber (Gy14) v2	cgybwgoB210
Bhi11G001445	Cucumber (Gy14) v2	cgybwgoB348
Bhi11G001445	Cucurbita maxima (Rimu)	cmawgoB0290
Bhi11G001445	Cucurbita maxima (Rimu)	cmawgoB0774
Bhi11G001445	Cucurbita maxima (Rimu)	cmawgoB0976
Bhi11G001445	Cucurbita maxima (Rimu)	cmawgoB1047
Bhi11G001445	Cucurbita moschata (Rifu)	cmowgoB0280
Bhi11G001445	Cucurbita moschata (Rifu)	cmowgoB0766
Bhi11G001445	Cucurbita moschata (Rifu)	cmowgoB0972
Bhi11G001445	Cucurbita pepo (Zucchini)	cpewgoB0070
Bhi11G001445	Cucurbita pepo (Zucchini)	cpewgoB0586
Bhi11G001445	Cucurbita pepo (Zucchini)	cpewgoB1086
Bhi11G001445	Wild cucumber (PI 183967)	cpiwgoB219
Bhi11G001445	Wild cucumber (PI 183967)	cpiwgoB364
Bhi11G001445	Cucumber (Chinese Long) v3	cucwgoB366
Bhi11G001445	Cucumber (Chinese Long) v2	cuwgoB362
Bhi11G001445	Bottle gourd (USVL1VR-Ls)	lsiwgoB151
Bhi11G001445	Bottle gourd (USVL1VR-Ls)	lsiwgoB298
Bhi11G001445	Bottle gourd (USVL1VR-Ls)	lsiwgoB299
Bhi11G001445	Melon (DHL92) v3.6.1	medwgoB381
Bhi11G001445	Melon (DHL92) v3.5.1	mewgoB379
Bhi11G001445	Watermelon (Charleston Gray)	wcgwgoB138
Bhi11G001445	Watermelon (Charleston Gray)	wcgwgoB375
Bhi11G001445	Watermelon (97103) v2	wgowmbB030
Bhi11G001445	Watermelon (97103) v2	wgowmbB036
Bhi11G001445	Watermelon (97103) v1	wgowmB049
Bhi11G001445	Silver-seed gourd	carwgoB0200
Bhi11G001445	Silver-seed gourd	carwgoB0367
Bhi11G001445	Silver-seed gourd	carwgoB1166