Bhi11G000969 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000969
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Octanoyltransferase
Location	chr11 : 33918723 .. 33919029 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCATTGGTACCTCAGGGCACTTGAGGAGGTCATCATACGCGTTCTTTCCTCGACATTTTCGATCAATGCTCATCGAATCGATGGTTTAACAGGTGTCTGGGCAGGTATTCCTTGTAGAAATTTGTATATACCATATTCCAAATGCTTTTTCTCTTCTATTTTTGTATGTAGCATATTCTAAATGCTATATTCATTCCTCGCTACTTCGACATTCGACATAACGAATTGAATTTCTTAAATGATTTTCCTTTGCAGGAGACCAGAAACTGGAAGCCATTGGAATTAGGGTATCTAAATAG

mRNA sequence

ATGGATCTTCATTGGTACCTCAGGGCACTTGAGGAGGTCATCATACGCGTTCTTTCCTCGACATTTTCGATCAATGCTCATCGAATCGATGGTTTAACAGGTGTCTGGGCAGGAGACCAGAAACTGGAAGCCATTGGAATTAGGGTATCTAAATAG

Coding sequence (CDS)

ATGGATCTTCATTGGTACCTCAGGGCACTTGAGGAGGTCATCATACGCGTTCTTTCCTCGACATTTTCGATCAATGCTCATCGAATCGATGGTTTAACAGGTGTCTGGGCAGGAGACCAGAAACTGGAAGCCATTGGAATTAGGGTATCTAAATAG

Protein sequence

MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK

Homology

[Close]

BLAST of Bhi11G000969 vs. TAIR10
Match: AT4G31050.1 (Biotin/lipoate A/B protein ligase family)

HSP 1 Score: 90.1 bits (222), Expect = 4.2e-19
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLR LEE++IRVLSSTFSI A R+DGLTGVW G+QK+ AIGIRVSK
Sbjct: 146 MDLHWYLRMLEEIVIRVLSSTFSIKASRLDGLTGVWVGNQKVAAIGIRVSK 196

[Close]

BLAST of Bhi11G000969 vs. TAIR10
Match: AT1G47578.1 (Biotin/lipoate A/B protein ligase family)

HSP 1 Score: 87.0 bits (214), Expect = 3.6e-18
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLR LEEV+IRVLSS F+INA R+DG TGVW G++K+ AIGIRVSK
Sbjct: 148 MDLHWYLRKLEEVVIRVLSSAFAINASRLDGFTGVWVGNKKMAAIGIRVSK 198

[Close]

BLAST of Bhi11G000969 vs. Swiss-Prot
Match: sp|Q948J9|LIP2P_ARATH (Octanoyltransferase LIP2p, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP2P PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 7.6e-18
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLR LEE++IRVLSSTFSI A R+DGLTGVW G+QK+ AIGIRVSK
Sbjct: 146 MDLHWYLRMLEEIVIRVLSSTFSIKASRLDGLTGVWVGNQKVAAIGIRVSK 196

[Close]

BLAST of Bhi11G000969 vs. Swiss-Prot
Match: sp|P0C7R2|LI2P2_ARATH (Octanoyltransferase LIP2p2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP2P2 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.4e-17
Identity = 39/51 (76.47%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLR LEEV+IRVLSS F+INA R+DG TGVW G++K+ AIGIRVSK
Sbjct: 148 MDLHWYLRKLEEVVIRVLSSAFAINASRLDGFTGVWVGNKKMAAIGIRVSK 198

[Close]

BLAST of Bhi11G000969 vs. Swiss-Prot
Match: sp|Q7ND22|LIPB_GLOVI (Octanoyltransferase OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=lipB PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.9e-10
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 2   DLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           DLHWYLR LE+V+I VL+  F +   R  G TGVWAG +K+ A+GI+VS+
Sbjct: 98  DLHWYLRTLEQVLIEVLAD-FGVQGEREAGFTGVWAGGRKIAALGIKVSR 146

[Close]

BLAST of Bhi11G000969 vs. Swiss-Prot
Match: sp|Q31KN6|LIPB_SYNE7 (Octanoyltransferase OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=lipB PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-09
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 2   DLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           DLHWYLR LE V+I VL++ + +   RI+GLTGVW   +KL AIGI+VS+
Sbjct: 102 DLHWYLRQLEAVLILVLAN-YGLTGERIEGLTGVWVEGKKLAAIGIQVSR 150

[Close]

BLAST of Bhi11G000969 vs. Swiss-Prot
Match: sp|Q5N180|LIPB_SYNP6 (Octanoyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=lipB PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-09
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 2   DLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           DLHWYLR LE V+I VL++ + +   RI+GLTGVW   +KL AIGI+VS+
Sbjct: 102 DLHWYLRQLEAVLILVLAN-YGLTGERIEGLTGVWVEGKKLAAIGIQVSR 150

[Close]

BLAST of Bhi11G000969 vs. TrEMBL
Match: tr|A0A1S4DWA5|A0A1S4DWA5_CUCME (plastidial lipoyltransferase 2-like OS=Cucumis melo OX=3656 GN=LOC103489357 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.1e-19
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEV+IRVLSSTFSINAHRIDGLTGVWAG+QKL AIGIRVSK
Sbjct: 158 MDLHWYLRALEEVVIRVLSSTFSINAHRIDGLTGVWAGNQKLAAIGIRVSK 208

[Close]

BLAST of Bhi11G000969 vs. TrEMBL
Match: tr|A0A0A0KRC7|A0A0A0KRC7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612870 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.1e-19
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEV+IRVLSSTFSINAHRIDGLTGVWAG+QKL AIGIRVSK
Sbjct: 158 MDLHWYLRALEEVVIRVLSSTFSINAHRIDGLTGVWAGNQKLAAIGIRVSK 208

[Close]

BLAST of Bhi11G000969 vs. TrEMBL
Match: tr|B9SUW2|B9SUW2_RICCO (Lipoate-protein ligase B, putative OS=Ricinus communis OX=3988 GN=RCOM_0251400 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.0e-16
Identity = 42/51 (82.35%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLR LEEV+IRVLSSTFSI A RI+GLTGVWAGDQKL AIG++VS+
Sbjct: 146 MDLHWYLRTLEEVVIRVLSSTFSIQASRIEGLTGVWAGDQKLAAIGVKVSR 196

[Close]

BLAST of Bhi11G000969 vs. TrEMBL
Match: tr|A0A2G5E9J0|A0A2G5E9J0_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01000365v1 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-16
Identity = 43/51 (84.31%), Postives = 47/51 (92.16%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEV+IRVLSSTFSI A RI+GLTGVW G+QKL AIGIRVS+
Sbjct: 150 MDLHWYLRALEEVVIRVLSSTFSIKASRIEGLTGVWVGNQKLAAIGIRVSR 200

[Close]

BLAST of Bhi11G000969 vs. TrEMBL
Match: tr|A0A2C9VWY5|A0A2C9VWY5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G166100 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-16
Identity = 43/51 (84.31%), Postives = 46/51 (90.20%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEV IRVLSSTFSI A R+DGLTGVW GDQKL AIGI+VS+
Sbjct: 154 MDLHWYLRALEEVAIRVLSSTFSIEASRVDGLTGVWVGDQKLAAIGIKVSQ 204

[Close]

BLAST of Bhi11G000969 vs. NCBI nr
Match: XP_004135053.2 (PREDICTED: plastidial lipoyltransferase 2 [Cucumis sativus] >KGN52158.1 hypothetical protein Csa_5G612870 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 7.7e-19
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEV+IRVLSSTFSINAHRIDGLTGVWAG+QKL AIGIRVSK
Sbjct: 158 MDLHWYLRALEEVVIRVLSSTFSINAHRIDGLTGVWAGNQKLAAIGIRVSK 208

[Close]

BLAST of Bhi11G000969 vs. NCBI nr
Match: XP_016900264.1 (PREDICTED: plastidial lipoyltransferase 2-like [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 7.7e-19
Identity = 48/51 (94.12%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEV+IRVLSSTFSINAHRIDGLTGVWAG+QKL AIGIRVSK
Sbjct: 158 MDLHWYLRALEEVVIRVLSSTFSINAHRIDGLTGVWAGNQKLAAIGIRVSK 208

[Close]

BLAST of Bhi11G000969 vs. NCBI nr
Match: XP_022150592.1 (plastidial lipoyltransferase 2-like [Momordica charantia] >XP_022150593.1 plastidial lipoyltransferase 2-like [Momordica charantia])

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-18
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEV+IRVLSSTFSINAHR+DGLTGVWAG+QKL AIGIRVSK
Sbjct: 153 MDLHWYLRALEEVVIRVLSSTFSINAHRLDGLTGVWAGNQKLAAIGIRVSK 203

[Close]

BLAST of Bhi11G000969 vs. NCBI nr
Match: XP_022945515.1 (plastidial lipoyltransferase 2-like [Cucurbita moschata])

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-18
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEVIIRVLSSTFSINA+R+DGLTGVWAG+QKL AIGIRVSK
Sbjct: 160 MDLHWYLRALEEVIIRVLSSTFSINANRVDGLTGVWAGNQKLAAIGIRVSK 210

[Close]

BLAST of Bhi11G000969 vs. NCBI nr
Match: XP_023541711.1 (plastidial lipoyltransferase 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-17
Identity = 46/51 (90.20%), Postives = 50/51 (98.04%), Query Frame = 0


Query: 1   MDLHWYLRALEEVIIRVLSSTFSINAHRIDGLTGVWAGDQKLEAIGIRVSK 52
           MDLHWYLRALEEVIIRVLSSTFS+NA+R+DGLTGVWAG+QKL AIGIRVSK
Sbjct: 160 MDLHWYLRALEEVIIRVLSSTFSMNANRVDGLTGVWAGNQKLAAIGIRVSK 210

The following BLAST results are available for this feature:

BLAST of Bhi11G000969 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31050.1	4.2e-19	80.39	Biotin/lipoate A/B protein ligase family	[more]
AT1G47578.1	3.6e-18	76.47	Biotin/lipoate A/B protein ligase family	[more]

BLAST of Bhi11G000969 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q948J9\|LIP2P_ARATH	7.6e-18	80.39	Octanoyltransferase LIP2p, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP2...	[more]
sp\|P0C7R2\|LI2P2_ARATH	6.4e-17	76.47	Octanoyltransferase LIP2p2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP...	[more]
sp\|Q7ND22\|LIPB_GLOVI	9.9e-10	56.00	Octanoyltransferase OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=lipB...	[more]
sp\|Q31KN6\|LIPB_SYNE7	2.2e-09	58.00	Octanoyltransferase OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=lipB...	[more]
sp\|Q5N180\|LIPB_SYNP6	2.2e-09	58.00	Octanoyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 14...	[more]

BLAST of Bhi11G000969 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DWA5\|A0A1S4DWA5_CUCME	5.1e-19	94.12	plastidial lipoyltransferase 2-like OS=Cucumis melo OX=3656 GN=LOC103489357 PE=3...	[more]
tr\|A0A0A0KRC7\|A0A0A0KRC7_CUCSA	5.1e-19	94.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G612870 PE=3 SV=1	[more]
tr\|B9SUW2\|B9SUW2_RICCO	4.0e-16	82.35	Lipoate-protein ligase B, putative OS=Ricinus communis OX=3988 GN=RCOM_0251400 P...	[more]
tr\|A0A2G5E9J0\|A0A2G5E9J0_AQUCA	5.3e-16	84.31	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01000365v1 PE=3...	[more]
tr\|A0A2C9VWY5\|A0A2C9VWY5_MANES	5.3e-16	84.31	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G166100 PE=3 SV=...	[more]

BLAST of Bhi11G000969 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135053.2	7.7e-19	94.12	PREDICTED: plastidial lipoyltransferase 2 [Cucumis sativus] >KGN52158.1 hypothet...	[more]
XP_016900264.1	7.7e-19	94.12	PREDICTED: plastidial lipoyltransferase 2-like [Cucumis melo]	[more]
XP_022150592.1	1.3e-18	92.16	plastidial lipoyltransferase 2-like [Momordica charantia] >XP_022150593.1 plasti...	[more]
XP_022945515.1	5.0e-18	92.16	plastidial lipoyltransferase 2-like [Cucurbita moschata]	[more]
XP_023541711.1	1.1e-17	90.20	plastidial lipoyltransferase 2-like [Cucurbita pepo subsp. pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006464	cellular protein modification process

Vocabulary: **INTERPRO**
Term	Definition
IPR004143	BPL_LPL_catalytic

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009249	protein lipoylation
biological_process	GO:0006464	cellular protein modification process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0033819	lipoyl(octanoyl) transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000969	Bhi11M000969	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.930.10		coord: 1..51 e-value: 1.9E-13 score: 52.3
None	No IPR available	PANTHER	PTHR10993:SF11	PLASTIDIAL LIPOYLTRANSFERASE 2-RELATED	coord: 1..51
None	No IPR available	PANTHER	PTHR10993	OCTANOYLTRANSFERASE	coord: 1..51
None	No IPR available	PRODOM	PD006086		coord: 1..28 e-value: 6.0E-7 score: 121.0
None	No IPR available	SUPERFAMILY	SSF55681	Class II aaRS and biotin synthetases	coord: 1..51
IPR004143	Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain	PROSITE	PS51733	BPL_LPL_CATALYTIC	coord: 1..51 score: 16.611

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000969	Cucumber (Gy14) v1	cgywgoB125
Bhi11G000969	Cucumber (Gy14) v1	cgywgoB443
Bhi11G000969	Cucumber (Gy14) v2	cgybwgoB342
Bhi11G000969	Cucumber (Gy14) v2	cgybwgoB619
Bhi11G000969	Cucurbita maxima (Rimu)	cmawgoB0410
Bhi11G000969	Cucurbita maxima (Rimu)	cmawgoB0814
Bhi11G000969	Cucurbita moschata (Rifu)	cmowgoB0405
Bhi11G000969	Cucurbita moschata (Rifu)	cmowgoB0810
Bhi11G000969	Cucurbita pepo (Zucchini)	cpewgoB0266
Bhi11G000969	Cucurbita pepo (Zucchini)	cpewgoB0477
Bhi11G000969	Wild cucumber (PI 183967)	cpiwgoB358
Bhi11G000969	Wild cucumber (PI 183967)	cpiwgoB659
Bhi11G000969	Cucumber (Chinese Long) v3	cucwgoB360
Bhi11G000969	Cucumber (Chinese Long) v2	cuwgoB356
Bhi11G000969	Cucumber (Chinese Long) v2	cuwgoB651
Bhi11G000969	Bottle gourd (USVL1VR-Ls)	lsiwgoB292
Bhi11G000969	Bottle gourd (USVL1VR-Ls)	lsiwgoB307
Bhi11G000969	Melon (DHL92) v3.6.1	medwgoB200
Bhi11G000969	Melon (DHL92) v3.6.1	medwgoB569
Bhi11G000969	Melon (DHL92) v3.5.1	mewgoB198
Bhi11G000969	Melon (DHL92) v3.5.1	mewgoB564
Bhi11G000969	Watermelon (Charleston Gray)	wcgwgoB078
Bhi11G000969	Watermelon (Charleston Gray)	wcgwgoB259
Bhi11G000969	Watermelon (97103) v2	wgowmbB001
Bhi11G000969	Watermelon (97103) v2	wgowmbB033
Bhi11G000969	Watermelon (97103) v1	wgowmB007
Bhi11G000969	Silver-seed gourd	carwgoB0381
Bhi11G000969	Silver-seed gourd	carwgoB0456