Bhi11G000925 (gene) Wax gourd

Overview
NameBhi11G000925
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 32801260 .. 32801652 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTACCCCAGATACCGTCATTGTTTCTTTCTCCGGAAAGAAGTTCAACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCATCAGGCCTTTCGCCCATTGCGGAAAATTCCCTATTGCTGCCATCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCTAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCTTCGCCTTGGTAAGTTTATTGCGCTACCAACTAGCTAATCAGATGCGAGCCCCTCTCTCGGGCGGATTCCTCCTTTTGTCCTCATGCGTATGGGGTATTAGCAACCGTTTCCAGCTATTGTTCCCCCTCCAAGGGCAGGTTCTTATACCGTTATTCACCCGTCTGCCACTGGAAACACCACTTCCCATCTGA

mRNA sequence

ATGGTTTACCCCAGATACCGTCATTGTTTCTTTCTCCGGAAAGAAGTTCAACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCATCAGGCCTTTCGCCCATTGCGGAAAATTCCCTATTGCTGCCATCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCTAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCTTCGCCTTGGTAAGTTTATTGCGCTACCAACTAGCTAATCAGATGCGAGCCCCTCTCTCGGGCGGATTCCTCCTTTTGTCCTCATGCGTATGGGGTATTAGCAACCGTTTCCAGCTATTGTTCCCCCTCCAAGGGCAGGTTCTTATACCGTTATTCACCCGTCTGCCACTGGAAACACCACTTCCCATCTGA

Coding sequence (CDS)

ATGGTTTACCCCAGATACCGTCATTGTTTCTTTCTCCGGAAAGAAGTTCAACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCATCAGGCCTTTCGCCCATTGCGGAAAATTCCCTATTGCTGCCATCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCTAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCTTCGCCTTGGTAAGTTTATTGCGCTACCAACTAGCTAATCAGATGCGAGCCCCTCTCTCGGGCGGATTCCTCCTTTTGTCCTCATGCGTATGGGGTATTAGCAACCGTTTCCAGCTATTGTTCCCCCTCCAAGGGCAGGTTCTTATACCGTTATTCACCCGTCTGCCACTGGAAACACCACTTCCCATCTGA

Protein sequence

MVYPRYRHCFFLRKEVQRPVGLLPPRGIAPSGLSPIAENSLLLPSRRSLGRVSVLVWLIILSDQLLIFALVSLLRYQLANQMRAPLSGGFLLLSSCVWGISNRFQLLFPLQGQVLIPLFTRLPLETPLPI
Homology
[Close]
BLAST of Bhi11G000925 vs. TrEMBL
Match: tr|A0A0P6BEI3|A0A0P6BEI3_9CRUS (Uncharacterized protein OS=Daphnia magna OX=35525 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-04
Identity = 45/88 (51.14%), Postives = 52/88 (59.09%), Query Frame = 0 

Query: 45  SRRSLGRVSVLVWLIILSDQLLIFALVSLLRYQLANQM--RAPLSGGFLLL--SSC---- 104
           SRRSL RVSV VWLIILSDQL IF LV    +  AN +  R P+S     L  SSC    
Sbjct: 65  SRRSLDRVSVPVWLIILSDQLPIFDLVG---HYPANYLMGREPISRRIAALASSSCDDVV 124

Query: 105 VWGISNRFQLLFPLQGQVLIPLFTRLPL 125
           + GIS  F  LFP++  V+  L TR PL
Sbjct: 125 LCGISAPFGTLFPIRRYVIHVLLTRAPL 149

[Close]
BLAST of Bhi11G000925 vs. TrEMBL
Match: tr|A0A2P5R5N9|A0A2P5R5N9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD20947 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-04
Identity = 37/72 (51.39%), Postives = 39/72 (54.17%), Query Frame = 0 

Query: 45  SRRSLGRVSVLVWLIILSDQLLIFALVSLLRYQLANQMRAPLSGGFLLLSSCVWGISNRF 104
           S +SLGRVSVLVWLIIL DQLLI  L                            GIS+RF
Sbjct: 104 SHKSLGRVSVLVWLIILLDQLLIIIL----------------------------GISSRF 147

Query: 105 QLLFPLQGQVLI 117
           QLLFP QGQVLI
Sbjct: 164 QLLFPSQGQVLI 147

[Close]
BLAST of Bhi11G000925 vs. NCBI nr
Match: PPD82130.1 (hypothetical protein GOBAR_DD20947 [Gossypium barbadense])

HSP 1 Score: 53.1 bits (126), Expect = 8.0e-04
Identity = 37/72 (51.39%), Postives = 39/72 (54.17%), Query Frame = 0 

Query: 45  SRRSLGRVSVLVWLIILSDQLLIFALVSLLRYQLANQMRAPLSGGFLLLSSCVWGISNRF 104
           S +SLGRVSVLVWLIIL DQLLI  L                            GIS+RF
Sbjct: 104 SHKSLGRVSVLVWLIILLDQLLIIIL----------------------------GISSRF 147

Query: 105 QLLFPLQGQVLI 117
           QLLFP QGQVLI
Sbjct: 164 QLLFPSQGQVLI 147

The following BLAST results are available for this feature:
BLAST of Bhi11G000925 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G000925 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G000925 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0P6BEI3|A0A0P6BEI3_9CRUS5.3e-0451.14Uncharacterized protein OS=Daphnia magna OX=35525 PE=4 SV=1[more]
tr|A0A2P5R5N9|A0A2P5R5N9_GOSBA5.3e-0451.39Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD20947 PE=4 SV... [more]
BLAST of Bhi11G000925 vs. NCBI nr
Match NameE-valueIdentityDescription
PPD82130.18.0e-0451.39hypothetical protein GOBAR_DD20947 [Gossypium barbadense][more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000925Bhi11M000925mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G000925Cucumber (Gy14) v1cgywgoB443
Bhi11G000925Cucumber (Gy14) v1cgywgoB597
Bhi11G000925Cucumber (Gy14) v2cgybwgoB342
Bhi11G000925Cucumber (Gy14) v2cgybwgoB619
Bhi11G000925Cucurbita maxima (Rimu)cmawgoB0410
Bhi11G000925Cucurbita maxima (Rimu)cmawgoB0634
Bhi11G000925Cucurbita maxima (Rimu)cmawgoB0814
Bhi11G000925Cucurbita moschata (Rifu)cmowgoB0405
Bhi11G000925Cucurbita moschata (Rifu)cmowgoB0635
Bhi11G000925Cucurbita moschata (Rifu)cmowgoB0810
Bhi11G000925Cucurbita pepo (Zucchini)cpewgoB0266
Bhi11G000925Cucurbita pepo (Zucchini)cpewgoB0311
Bhi11G000925Cucurbita pepo (Zucchini)cpewgoB0477
Bhi11G000925Wild cucumber (PI 183967)cpiwgoB358
Bhi11G000925Wild cucumber (PI 183967)cpiwgoB659
Bhi11G000925Cucumber (Chinese Long) v3cucwgoB360
Bhi11G000925Cucumber (Chinese Long) v3cucwgoB674
Bhi11G000925Cucumber (Chinese Long) v2cuwgoB356
Bhi11G000925Cucumber (Chinese Long) v2cuwgoB651
Bhi11G000925Bottle gourd (USVL1VR-Ls)lsiwgoB292
Bhi11G000925Bottle gourd (USVL1VR-Ls)lsiwgoB307
Bhi11G000925Melon (DHL92) v3.6.1medwgoB200
Bhi11G000925Melon (DHL92) v3.6.1medwgoB569
Bhi11G000925Melon (DHL92) v3.5.1mewgoB198
Bhi11G000925Melon (DHL92) v3.5.1mewgoB564
Bhi11G000925Watermelon (Charleston Gray)wcgwgoB078
Bhi11G000925Watermelon (Charleston Gray)wcgwgoB259
Bhi11G000925Watermelon (97103) v2wgowmbB001
Bhi11G000925Watermelon (97103) v2wgowmbB033
Bhi11G000925Watermelon (97103) v1wgowmB007
Bhi11G000925Silver-seed gourdcarwgoB0381
Bhi11G000925Silver-seed gourdcarwgoB0456