Bhi11G000907 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000907
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Agamous-like MADS-box protein
Location	chr11 : 32353211 .. 32353459 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGAGCAAAGGGAGGCAAAAGGTGGAGATGGTAAAGATGCCAAATGAGAGAAACCTTCAAGTCACCTTCTCGAAGCGCTGGTCTGGCCTCTTCAAGAAAGCTAGTGAGCTCTACGGTGCTAAGATTGCCATTATCATCTTTTTGCCTGAGAAGAAGGTCTTCTCTTTTGGCCACCTTTGCGTTGAAGCCCTCATCAAGAGATTTGTGACTCGAAATCCTCCACCAAGCTCTAGTACGCTGTAG

mRNA sequence

ATGAGGAAGAGCAAAGGGAGGCAAAAGGTGGAGATGGTAAAGATGCCAAATGAGAGAAACCTTCAAGTCACCTTCTCGAAGCGCTGGTCTGGCCTCTTCAAGAAAGCTAGTGAGCTCTACGGTGCTAAGATTGCCATTATCATCTTTTTGCCTGAGAAGAAGGTCTTCTCTTTTGGCCACCTTTGCGTTGAAGCCCTCATCAAGAGATTTGTGACTCGAAATCCTCCACCAAGCTCTAGTACGCTGTAG

Coding sequence (CDS)

ATGAGGAAGAGCAAAGGGAGGCAAAAGGTGGAGATGGTAAAGATGCCAAATGAGAGAAACCTTCAAGTCACCTTCTCGAAGCGCTGGTCTGGCCTCTTCAAGAAAGCTAGTGAGCTCTACGGTGCTAAGATTGCCATTATCATCTTTTTGCCTGAGAAGAAGGTCTTCTCTTTTGGCCACCTTTGCGTTGAAGCCCTCATCAAGAGATTTGTGACTCGAAATCCTCCACCAAGCTCTAGTACGCTGTAG

Protein sequence

MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASELYGAKIAIIIFLPEKKVFSFGHLCVEALIKRFVTRNPPPSSSTL

Homology

[Close]

BLAST of Bhi11G000907 vs. TAIR10
Match: AT5G60440.1 (AGAMOUS-like 62)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-22
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          ++KSKGRQK+EMVKM NE NLQVTFSKR SGLFKKASE   L GA++AI++F P +KVFS
Sbjct: 2  VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61 FGHLCVEALIKRFVTRNPPP 78
          FGH  V+++I RF+  NP P
Sbjct: 62 FGHPNVDSVIDRFINNNPLP 81

[Close]

BLAST of Bhi11G000907 vs. TAIR10
Match: AT4G36590.1 (MADS-box transcription factor family protein)

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-18
Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          +R +KGRQK+EM KM NE NLQVTFSKR  GLFKKASE   L GA+I +I+F P  KVFS
Sbjct: 2  VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61 FGHLCVEALIKRFVTRN 75
          FGH  V+ LI RF   N
Sbjct: 62 FGHPSVQELIHRFSNPN 78

[Close]

BLAST of Bhi11G000907 vs. TAIR10
Match: AT2G24840.1 (AGAMOUS-like 61)

HSP 1 Score: 83.2 bits (204), Expect = 8.3e-17
Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 2   RKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFSF 61
           ++S GRQK+ MVK+  E + QVTFSKR +GLFKKASE   L GA+I II+F P KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHLCVEALIKRFVTRN 75
           GH  VE+++ R+V+RN
Sbjct: 119 GHPSVESVLDRYVSRN 134

[Close]

BLAST of Bhi11G000907 vs. TAIR10
Match: AT1G65360.1 (AGAMOUS-like 23)

HSP 1 Score: 80.1 bits (196), Expect = 7.0e-16
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          ++K+ GR+KVE+VKM  E NLQVTFSKR +GLFKKASE   L  AKIA+I+F P  KVFS
Sbjct: 2  VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61 FGHLCVEALIKRF 71
          FGH  V+ L+  F
Sbjct: 62 FGHPNVDVLLDHF 74

[Close]

BLAST of Bhi11G000907 vs. TAIR10
Match: AT1G01530.1 (AGAMOUS-like 28)

HSP 1 Score: 77.8 bits (190), Expect = 3.5e-15
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 2  RKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFSF 61
          RK+ GR+K+E+VKM NE NLQVTFSKR SGLFKK SE   L  A+IAII+F P  K +SF
Sbjct: 3  RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62 GHLCVEALIKRFVTR 74
          GH  V  L+   + R
Sbjct: 63 GHPNVNKLLDHSLGR 77

[Close]

BLAST of Bhi11G000907 vs. Swiss-Prot
Match: sp|Q9FKK2|AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-21
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          ++KSKGRQK+EMVKM NE NLQVTFSKR SGLFKKASE   L GA++AI++F P +KVFS
Sbjct: 2  VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61 FGHLCVEALIKRFVTRNPPP 78
          FGH  V+++I RF+  NP P
Sbjct: 62 FGHPNVDSVIDRFINNNPLP 81

[Close]

BLAST of Bhi11G000907 vs. Swiss-Prot
Match: sp|Q4PSU4|AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-15
Identity = 45/76 (59.21%), Postives = 58/76 (76.32%), Query Frame = 0


Query: 2   RKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFSF 61
           ++S GRQK+ MVK+  E + QVTFSKR +GLFKKASE   L GA+I II+F P KK FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHLCVEALIKRFVTRN 75
           GH  VE+++ R+V+RN
Sbjct: 119 GHPSVESVLDRYVSRN 134

[Close]

BLAST of Bhi11G000907 vs. Swiss-Prot
Match: sp|O80807|AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-14
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          ++K+ GR+KVE+VKM  E NLQVTFSKR +GLFKKASE   L  AKIA+I+F P  KVFS
Sbjct: 2  VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61 FGHLCVEALIKRF 71
          FGH  V+ L+  F
Sbjct: 62 FGHPNVDVLLDHF 74

[Close]

BLAST of Bhi11G000907 vs. Swiss-Prot
Match: sp|Q9LMM8|AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 6.3e-14
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 2  RKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFSF 61
          RK+ GR+K+E+VKM NE NLQVTFSKR SGLFKK SE   L  A+IAII+F P  K +SF
Sbjct: 3  RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62 GHLCVEALIKRFVTR 74
          GH  V  L+   + R
Sbjct: 63 GHPNVNKLLDHSLGR 77

[Close]

BLAST of Bhi11G000907 vs. Swiss-Prot
Match: sp|P29386|AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-08
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 6  GRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFSFGHLC 65
          GR +VEM ++ N+ N QVTFSKR +GL KKA E   L  A++A+IIF    K++ FG + 
Sbjct: 2  GRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVG 61

Query: 66 VEALIKRF 71
          +E+ I+R+
Sbjct: 62 IESTIERY 69

[Close]

BLAST of Bhi11G000907 vs. TrEMBL
Match: tr|A0A1S3BYP6|A0A1S3BYP6_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-28
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKS+GRQKVEMVKMPNE NLQVTFSKR SGLFKKASE   L GA+IAII+F P KKVFS
Sbjct: 1  MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVEALI+RFVTRNPPPSS TL
Sbjct: 61 FGHPCVEALIERFVTRNPPPSSGTL 85

[Close]

BLAST of Bhi11G000907 vs. TrEMBL
Match: tr|A0A0A0KWA9|A0A0A0KWA9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000530 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-28
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKS+GRQKVEMVKMPNE NLQVTFSKR SGLFKKASE   L GA+IAII+F P KKVFS
Sbjct: 1  MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVEALI+RFVTRNPPPSS TL
Sbjct: 61 FGHPCVEALIERFVTRNPPPSSGTL 85

[Close]

BLAST of Bhi11G000907 vs. TrEMBL
Match: tr|A0A2P4KBP3|A0A2P4KBP3_QUESU (Agamous-like mads-box protein agl62 OS=Quercus suber OX=58331 GN=CFP56_59940 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.4e-25
Identity = 64/85 (75.29%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKSKGRQK+EMVKMPN+ NLQVTFSKR SGLFKKASE   L GA+I II+F P KKVFS
Sbjct: 1  MRKSKGRQKIEMVKMPNDSNLQVTFSKRRSGLFKKASELCTLCGAEIGIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVE +I RF+TRNPP +S TL
Sbjct: 61 FGHPCVETIIDRFLTRNPPQNSGTL 85

[Close]

BLAST of Bhi11G000907 vs. TrEMBL
Match: tr|V4SG26|V4SG26_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10030142mg PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 2  RKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFSF 61
          +KSKGRQKVEMVKMPNE NLQVTFSKR +GLFKKASE   L GA IAII+F P KKVFSF
Sbjct: 4  KKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF 63

Query: 62 GHLCVEALIKRFVTRNPPPSSSTL 83
          GH CVE ++ R++TRNPP  S T+
Sbjct: 64 GHPCVETIVDRYLTRNPPQISGTM 87

[Close]

BLAST of Bhi11G000907 vs. TrEMBL
Match: tr|A0A2H5P9P2|A0A2H5P9P2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_114480 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 2  RKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFSF 61
          +KSKGRQKVEMVKMPNE NLQVTFSKR +GLFKKASE   L GA IAII+F P KKVFSF
Sbjct: 7  KKSKGRQKVEMVKMPNESNLQVTFSKRRTGLFKKASELCTLCGADIAIIVFSPGKKVFSF 66

Query: 62 GHLCVEALIKRFVTRNPPPSSSTL 83
          GH CVE ++ R++TRNPP  S T+
Sbjct: 67 GHPCVETIVDRYLTRNPPQISGTM 90

[Close]

BLAST of Bhi11G000907 vs. NCBI nr
Match: XP_004150272.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN52732.1 hypothetical protein Csa_4G000530 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-28
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKS+GRQKVEMVKMPNE NLQVTFSKR SGLFKKASE   L GA+IAII+F P KKVFS
Sbjct: 1  MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVEALI+RFVTRNPPPSS TL
Sbjct: 61 FGHPCVEALIERFVTRNPPPSSGTL 85

[Close]

BLAST of Bhi11G000907 vs. NCBI nr
Match: XP_008454428.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-28
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKS+GRQKVEMVKMPNE NLQVTFSKR SGLFKKASE   L GA+IAII+F P KKVFS
Sbjct: 1  MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVEALI+RFVTRNPPPSS TL
Sbjct: 61 FGHPCVEALIERFVTRNPPPSSGTL 85

[Close]

BLAST of Bhi11G000907 vs. NCBI nr
Match: XP_022149295.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-28
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKS+GRQKVEMVKMPNE NLQVTFSKR SGLFKKASE   L GA+IAII+F P KKVFS
Sbjct: 1  MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVEALI+RFVTRNPPPSS TL
Sbjct: 61 FGHPCVEALIERFVTRNPPPSSGTL 85

[Close]

BLAST of Bhi11G000907 vs. NCBI nr
Match: XP_022942821.1 (agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-28
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKS+GRQKVEMVKMPNE NLQVTFSKR SGLFKKASE   L GA+IAII+F P KKVFS
Sbjct: 1  MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVEALI+RFVTRNPPPSS TL
Sbjct: 61 FGHPCVEALIERFVTRNPPPSSGTL 85

[Close]

BLAST of Bhi11G000907 vs. NCBI nr
Match: XP_022975753.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 133.3 bits (334), Expect = 3.8e-28
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MRKSKGRQKVEMVKMPNERNLQVTFSKRWSGLFKKASE---LYGAKIAIIIFLPEKKVFS 60
          MRKS+GRQKVEMVKMPNE NLQVTFSKR SGLFKKASE   L GA+IAII+F P KKVFS
Sbjct: 1  MRKSRGRQKVEMVKMPNESNLQVTFSKRRSGLFKKASELCTLCGAEIAIIVFSPGKKVFS 60

Query: 61 FGHLCVEALIKRFVTRNPPPSSSTL 83
          FGH CVEALI+RFVTRNPPPSS TL
Sbjct: 61 FGHPCVEALIERFVTRNPPPSSGTL 85

The following BLAST results are available for this feature:

BLAST of Bhi11G000907 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60440.1	1.0e-22	66.25	AGAMOUS-like 62	[more]
AT4G36590.1	5.7e-18	63.64	MADS-box transcription factor family protein	[more]
AT2G24840.1	8.3e-17	59.21	AGAMOUS-like 61	[more]
AT1G65360.1	7.0e-16	61.64	AGAMOUS-like 23	[more]
AT1G01530.1	3.5e-15	58.67	AGAMOUS-like 28	[more]

BLAST of Bhi11G000907 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FKK2\|AGL62_ARATH	1.8e-21	66.25	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
sp\|Q4PSU4\|AGL61_ARATH	1.5e-15	59.21	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
sp\|O80807\|AGL23_ARATH	1.3e-14	61.64	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
sp\|Q9LMM8\|AGL28_ARATH	6.3e-14	58.67	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
sp\|P29386\|AGL6_ARATH	5.1e-08	47.06	Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana OX=3702 GN=AGL6 PE=1 ...	[more]

BLAST of Bhi11G000907 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYP6\|A0A1S3BYP6_CUCME	2.5e-28	83.53	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103494837 PE=4...	[more]
tr\|A0A0A0KWA9\|A0A0A0KWA9_CUCSA	2.5e-28	83.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000530 PE=4 SV=1	[more]
tr\|A0A2P4KBP3\|A0A2P4KBP3_QUESU	3.4e-25	75.29	Agamous-like mads-box protein agl62 OS=Quercus suber OX=58331 GN=CFP56_59940 PE=...	[more]
tr\|V4SG26\|V4SG26_9ROSI	1.1e-23	72.62	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10030142mg PE=4 ...	[more]
tr\|A0A2H5P9P2\|A0A2H5P9P2_CITUN	1.1e-23	72.62	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_114480 PE=4 SV=1	[more]

BLAST of Bhi11G000907 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150272.1	3.8e-28	83.53	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN52732.1 hyp...	[more]
XP_008454428.1	3.8e-28	83.53	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
XP_022149295.1	3.8e-28	83.53	agamous-like MADS-box protein AGL62 [Momordica charantia]	[more]
XP_022942821.1	3.8e-28	83.53	agamous-like MADS-box protein AGL62 [Cucurbita moschata] >XP_023516147.1 agamous...	[more]
XP_022975753.1	3.8e-28	83.53	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036879	TF_MADSbox_sf
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
molecular_function	GO:0008134	transcription factor binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000907	Bhi11M000907	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 7..27 score: 46.61 coord: 27..42 score: 55.56
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..61 e-value: 5.0E-15 score: 65.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 16..58 e-value: 2.8E-15 score: 55.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..58 score: 14.956
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 17..79 e-value: 8.1E-17 score: 62.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 6..75
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 4..79
None	No IPR available	PANTHER	PTHR11945:SF185	AGAMOUS-LIKE MADS-BOX PROTEIN AGL23-RELATED	coord: 4..79

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000907	Cucumber (Gy14) v1	cgywgoB443
Bhi11G000907	Cucumber (Gy14) v1	cgywgoB597
Bhi11G000907	Cucumber (Gy14) v2	cgybwgoB342
Bhi11G000907	Cucumber (Gy14) v2	cgybwgoB619
Bhi11G000907	Cucurbita maxima (Rimu)	cmawgoB0410
Bhi11G000907	Cucurbita maxima (Rimu)	cmawgoB0634
Bhi11G000907	Cucurbita maxima (Rimu)	cmawgoB0814
Bhi11G000907	Cucurbita moschata (Rifu)	cmowgoB0405
Bhi11G000907	Cucurbita moschata (Rifu)	cmowgoB0635
Bhi11G000907	Cucurbita moschata (Rifu)	cmowgoB0810
Bhi11G000907	Cucurbita pepo (Zucchini)	cpewgoB0266
Bhi11G000907	Cucurbita pepo (Zucchini)	cpewgoB0311
Bhi11G000907	Cucurbita pepo (Zucchini)	cpewgoB0477
Bhi11G000907	Wild cucumber (PI 183967)	cpiwgoB358
Bhi11G000907	Wild cucumber (PI 183967)	cpiwgoB659
Bhi11G000907	Cucumber (Chinese Long) v3	cucwgoB360
Bhi11G000907	Cucumber (Chinese Long) v3	cucwgoB674
Bhi11G000907	Cucumber (Chinese Long) v2	cuwgoB356
Bhi11G000907	Cucumber (Chinese Long) v2	cuwgoB651
Bhi11G000907	Bottle gourd (USVL1VR-Ls)	lsiwgoB292
Bhi11G000907	Bottle gourd (USVL1VR-Ls)	lsiwgoB307
Bhi11G000907	Melon (DHL92) v3.6.1	medwgoB200
Bhi11G000907	Melon (DHL92) v3.6.1	medwgoB569
Bhi11G000907	Melon (DHL92) v3.5.1	mewgoB198
Bhi11G000907	Melon (DHL92) v3.5.1	mewgoB564
Bhi11G000907	Watermelon (Charleston Gray)	wcgwgoB078
Bhi11G000907	Watermelon (Charleston Gray)	wcgwgoB259
Bhi11G000907	Watermelon (97103) v2	wgowmbB001
Bhi11G000907	Watermelon (97103) v2	wgowmbB033
Bhi11G000907	Watermelon (97103) v1	wgowmB007
Bhi11G000907	Silver-seed gourd	carwgoB0381
Bhi11G000907	Silver-seed gourd	carwgoB0456