Bhi11G000821 (gene) Wax gourd

Overview
NameBhi11G000821
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 29480552 .. 29480748 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAGGGTGATAGAGATGTATTGCGGCCTTCTCCTATTTATCAACTCGAACCTCATTCTTCTGCAGTTGATGTTACGGATCAGCCCCACTCTTCAGGCCAGCTGCTTTGCTCAGCATCTTCTGCCGATTGTCAGCCTGTTCAGTTGACCTCAGAGGATTCCAATCATCTTGCCAGGAAGTTGGTGGGCTCATCATGA

mRNA sequence

ATAAGGGTGATAGAGATGTATTGCGGCCTTCTCCTATTTATCAACTCGAACCTCATTCTTCTGCAGTTGATGTTACGGATCAGCCCCACTCTTCAGGCCAGCTGCTTTGCTCAGCATCTTCTGCCGATTGTCAGCCTGTTCAGTTGACCTCAGAGGATTCCAATCATCTTGCCAGGAAGTTGGTGGGCTCATCATGA

Coding sequence (CDS)

ATAAGGGTGATAGAGATGTATTGCGGCCTTCTCCTATTTATCAACTCGAACCTCATTCTTCTGCAGTTGATGTTACGGATCAGCCCCACTCTTCAGGCCAGCTGCTTTGCTCAGCATCTTCTGCCGATTGTCAGCCTGTTCAGTTGACCTCAGAGGATTCCAATCATCTTGCCAGGAAGTTGGTGGGCTCATCATGA

Protein sequence

KGDRDVLRPSPIYQLEPHSSAVDVTDQPHSSGQLLCSASSADCQPVQLTSEDSNHLARKLVGSS
Homology
[Close]
BLAST of Bhi11G000821 vs. TrEMBL
Match: tr|A0A2N9GIJ9|A0A2N9GIJ9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26896 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2   GDRDVLRPSPIYQLEPHSSAVDVTDQPHSSGQLLCSASSADCQPVQLTSEDSNHLAR 59
           GD DVLRPSP++QLEPHSSAVDVTDQPHSSGQ LC ASSADCQPVQLTSEDS+H A+
Sbjct: 328 GDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCPASSADCQPVQLTSEDSSHPAQ 384

[Close]
BLAST of Bhi11G000821 vs. TrEMBL
Match: tr|A0A2N9FRH9|A0A2N9FRH9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21209 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-19
Identity = 49/57 (85.96%), Postives = 53/57 (92.98%), Query Frame = 0 

Query: 2   GDRDVLRPSPIYQLEPHSSAVDVTDQPHSSGQLLCSASSADCQPVQLTSEDSNHLAR 59
           GD DVLRPSP++QLEPHSSAVDVTDQPHSSGQ LC ASSADCQPVQLTSEDS+H A+
Sbjct: 60  GDGDVLRPSPVHQLEPHSSAVDVTDQPHSSGQQLCPASSADCQPVQLTSEDSSHPAQ 116

[Close]
BLAST of Bhi11G000821 vs. TrEMBL
Match: tr|A0A2P5XSI0|A0A2P5XSI0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA14324 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-15
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 0 

Query: 2   GDRDVLRPSPIYQLEPHSSAVDVTDQPHSSGQLLCSASSADCQPVQLTSEDSNHLAR 59
           GD DV RPSP++QLEPHSS VDVTDQPHSSGQ  C A  ADCQ +QLTSEDSNH A+
Sbjct: 187 GDGDVFRPSPVHQLEPHSSTVDVTDQPHSSGQQPCPACFADCQSIQLTSEDSNHPAQ 243

[Close]
BLAST of Bhi11G000821 vs. TrEMBL
Match: tr|A0A068BHR7|A0A068BHR7_BATMA (Orf221 OS=Batis maritima OX=4436 GN=orf221 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-14
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 2  GDRDVLRPSPIYQLEPHSSAVDVTDQPHSSGQLLCSASSADCQPVQLTSEDSNHLAR 59
          GD DVLRPSP++    HSSAVDVTDQPHSSGQ  C ASSADCQPVQLTSEDS+H A+
Sbjct: 24 GDGDVLRPSPVHH---HSSAVDVTDQPHSSGQQPCPASSADCQPVQLTSEDSSHPAQ 77

[Close]
BLAST of Bhi11G000821 vs. NCBI nr
Match: PPS06319.1 (hypothetical protein GOBAR_AA14324 [Gossypium barbadense])

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-15
Identity = 43/57 (75.44%), Postives = 47/57 (82.46%), Query Frame = 0 

Query: 2   GDRDVLRPSPIYQLEPHSSAVDVTDQPHSSGQLLCSASSADCQPVQLTSEDSNHLAR 59
           GD DV RPSP++QLEPHSS VDVTDQPHSSGQ  C A  ADCQ +QLTSEDSNH A+
Sbjct: 187 GDGDVFRPSPVHQLEPHSSTVDVTDQPHSSGQQPCPACFADCQSIQLTSEDSNHPAQ 243

[Close]
BLAST of Bhi11G000821 vs. NCBI nr
Match: YP_009045815.1 (orf221 (mitochondrion) [Batis maritima] >AIC83418.1 orf221 (mitochondrion) [Batis maritima])

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-14
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 2  GDRDVLRPSPIYQLEPHSSAVDVTDQPHSSGQLLCSASSADCQPVQLTSEDSNHLAR 59
          GD DVLRPSP++    HSSAVDVTDQPHSSGQ  C ASSADCQPVQLTSEDS+H A+
Sbjct: 24 GDGDVLRPSPVHH---HSSAVDVTDQPHSSGQQPCPASSADCQPVQLTSEDSSHPAQ 77

The following BLAST results are available for this feature:
BLAST of Bhi11G000821 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G000821 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G000821 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2N9GIJ9|A0A2N9GIJ9_FAGSY3.7e-1985.96Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26896 PE=4 SV=1[more]
tr|A0A2N9FRH9|A0A2N9FRH9_FAGSY3.7e-1985.96Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21209 PE=4 SV=1[more]
tr|A0A2P5XSI0|A0A2P5XSI0_GOSBA1.1e-1575.44Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA14324 PE=4 SV... [more]
tr|A0A068BHR7|A0A068BHR7_BATMA2.8e-1477.19Orf221 OS=Batis maritima OX=4436 GN=orf221 PE=4 SV=1[more]
BLAST of Bhi11G000821 vs. NCBI nr
Match NameE-valueIdentityDescription
PPS06319.11.7e-1575.44hypothetical protein GOBAR_AA14324 [Gossypium barbadense][more]
YP_009045815.14.2e-1477.19orf221 (mitochondrion) [Batis maritima] >AIC83418.1 orf221 (mitochondrion) [Bati... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000821Bhi11M000821mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33