Bhi11G000768 (gene) Wax gourd

Overview
NameBhi11G000768
Typegene
OrganismBenincasa hispida (Wax gourd)
Description1-deoxy-D-xylulose-5-phosphate synthase-like
Locationchr11 : 27244500 .. 27244710 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGACCTTTTGGGAAAGAAGAACAGTTTCATTTATGTGATTGGAGATGGAGCTATGACAGCAGATCAAGGATATGAGGCGATGAATAATACAAGCTATCTCGATACAAACATGATCGTTATTCTCAACGACAACAAGCAAGTCTCATTGCCAACCACTACGCTTGATGTCCCTGCTACTCTTCTTGAAGCTCTTAGCAGTGCCTTAACATAA

mRNA sequence

AGACCTTTTGGGAAAGAAGAACAGTTTCATTTATGTGATTGGAGATGGAGCTATGACAGCAGATCAAGGATATGAGGCGATGAATAATACAAGCTATCTCGATACAAACATGATCGTTATTCTCAACGACAACAAGCAAGTCTCATTGCCAACCACTACGCTTGATGTCCCTGCTACTCTTCTTGAAGCTCTTAGCAGTGCCTTAACATAA

Coding sequence (CDS)

AGACCTTTTGGGAAAGAAGAACAGTTTCATTTATGTGATTGGAGATGGAGCTATGACAGCAGATCAAGGATATGAGGCGATGAATAATACAAGCTATCTCGATACAAACATGATCGTTATTCTCAACGACAACAAGCAAGTCTCATTGCCAACCACTACGCTTGATGTCCCTGCTACTCTTCTTGAAGCTCTTAGCAGTGCCTTAACATAA

Protein sequence

DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATLLEALSSALT
Homology
[Close]
BLAST of Bhi11G000768 vs. TAIR10
Match: AT4G15560.1 (Deoxyxylulose-5-phosphate synthase)

HSP 1 Score: 93.6 bits (231), Expect = 5.1e-20
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DL GK N+ + VIGDGAMTA Q YEAMNN  YLD++MIVILNDNKQVSLPT TLD P+  
Sbjct: 204 DLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPP 263

Query: 61  LEALSSALT 70
           + ALSSAL+
Sbjct: 264 VGALSSALS 272

[Close]
BLAST of Bhi11G000768 vs. TAIR10
Match: AT3G21500.2 (1-deoxy-D-xylulose 5-phosphate synthase 1)

HSP 1 Score: 87.4 bits (215), Expect = 3.7e-18
Identity = 47/69 (68.12%), Postives = 51/69 (73.91%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DL G  NS + VIGDGAMTA Q YEAMNN  YL +NMIVILNDNKQVSLPT  LD P   
Sbjct: 194 DLKGMNNSVVSVIGDGAMTAGQAYEAMNNAGYLHSNMIVILNDNKQVSLPTANLDGPTQP 253

Query: 61  LEALSSALT 70
           + ALS AL+
Sbjct: 254 VGALSCALS 262

[Close]
BLAST of Bhi11G000768 vs. TAIR10
Match: AT5G11380.1 (1-deoxy-D-xylulose 5-phosphate synthase 3)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-07
Identity = 30/69 (43.48%), Postives = 44/69 (63.77%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           D+ GK++  + VI +  +TA Q YEAM+N  YLD+NMIVILND++  SL     +     
Sbjct: 205 DMKGKRDRVVAVIDNVTITAGQAYEAMSNAGYLDSNMIVILNDSRH-SLHPNMEEGSKAS 264

Query: 61  LEALSSALT 70
           + ALSS ++
Sbjct: 265 ISALSSIMS 272

[Close]
BLAST of Bhi11G000768 vs. Swiss-Prot
Match: sp|Q6YU51|DXS2_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190000 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-21
Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKN  I VIGDGAMTA Q YEAMNN+ YLD+NMIV+LNDNKQVSLPT TLD PAT 
Sbjct: 198 DLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATP 257

Query: 61  LEALSSALT 70
           + ALS ALT
Sbjct: 258 VGALSKALT 266

[Close]
BLAST of Bhi11G000768 vs. Swiss-Prot
Match: sp|O22567|DXS1_ORYSJ (1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLA1 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 7.1e-19
Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DL G KN+ + VIGDGAMTA Q YEAMNN  YLD++MIVILNDNKQVSLPT TLD PA  
Sbjct: 200 DLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPP 259

Query: 61  LEALSSALT 70
           + ALSSAL+
Sbjct: 260 VGALSSALS 268

[Close]
BLAST of Bhi11G000768 vs. Swiss-Prot
Match: sp|Q38854|DXS_ARATH (1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DXS PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 9.3e-19
Identity = 49/69 (71.01%), Postives = 56/69 (81.16%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DL GK N+ + VIGDGAMTA Q YEAMNN  YLD++MIVILNDNKQVSLPT TLD P+  
Sbjct: 204 DLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPP 263

Query: 61  LEALSSALT 70
           + ALSSAL+
Sbjct: 264 VGALSSALS 272

[Close]
BLAST of Bhi11G000768 vs. Swiss-Prot
Match: sp|O78328|DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=TKT2 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-18
Identity = 48/69 (69.57%), Postives = 55/69 (79.71%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DL G+ N+ I VIGDGAMTA Q YEAMNN  YLD++MIVILNDN+QVSLPT TLD P   
Sbjct: 203 DLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPP 262

Query: 61  LEALSSALT 70
           + ALSSAL+
Sbjct: 263 VGALSSALS 271

[Close]
BLAST of Bhi11G000768 vs. Swiss-Prot
Match: sp|Q985Y3|DXS_RHILO (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=dxs PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-08
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTT 53
           DL G +N+ I VIGDGAM+A   YEAMNN   LD  +IVILNDN     P T
Sbjct: 137 DLSGGRNNVIAVIGDGAMSAGMAYEAMNNAGALDARLIVILNDNDMSIAPPT 188

[Close]
BLAST of Bhi11G000768 vs. TrEMBL
Match: tr|A0A1S3BNQ5|A0A1S3BNQ5_CUCME (probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491851 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.6e-21
Identity = 58/69 (84.06%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKNS I VIGDGAMTA Q YEAMNN  YLDTNMIVILNDNKQVSLPT TLD PAT 
Sbjct: 196 DLLGKKNSVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATP 255

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 256 VGALSSALT 264

[Close]
BLAST of Bhi11G000768 vs. TrEMBL
Match: tr|A0A0A0L869|A0A0A0L869_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G114510 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.6e-21
Identity = 58/69 (84.06%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKNS I VIGDGAMTA Q YEAMNN  YLDTNMIVILNDNKQVSLPT TLD PAT 
Sbjct: 196 DLLGKKNSVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATP 255

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 256 VGALSSALT 264

[Close]
BLAST of Bhi11G000768 vs. TrEMBL
Match: tr|A0A224X4B0|A0A224X4B0_HYPAN (1-D-deoxyxylulose 5-phosphate synthase OS=Hypericum androsaemum OX=140968 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-19
Identity = 55/69 (79.71%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKN+ I VIGDGAMTA Q YEAMNN  +LD NMIVILNDNKQVSLPT TLD PAT 
Sbjct: 200 DLLGKKNNVISVIGDGAMTAGQAYEAMNNAGFLDVNMIVILNDNKQVSLPTATLDGPATP 259

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 260 VGALSSALT 268

[Close]
BLAST of Bhi11G000768 vs. TrEMBL
Match: tr|A0A224XFS8|A0A224XFS8_9ROSI (1-D-deoxyxylulose 5-phosphate synthase OS=Hypericum annulatum OX=708052 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-19
Identity = 55/69 (79.71%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKN+ I VIGDGAMTA Q YEAMNN  +LD NMIVILNDNKQVSLPT TLD PAT 
Sbjct: 203 DLLGKKNNVISVIGDGAMTAGQAYEAMNNAGFLDVNMIVILNDNKQVSLPTATLDGPATP 262

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 263 VGALSSALT 271

[Close]
BLAST of Bhi11G000768 vs. TrEMBL
Match: tr|A0A224XGR2|A0A224XGR2_9ROSI (1-D-deoxyxylulose 5-phosphate synthase OS=Hypericum kalmianum OX=473045 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-19
Identity = 55/69 (79.71%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKN+ I VIGDGAMTA Q YEAMNN  +LD NMIVILNDNKQVSLPT TLD PAT 
Sbjct: 201 DLLGKKNNVISVIGDGAMTAGQAYEAMNNAGFLDVNMIVILNDNKQVSLPTATLDGPATP 260

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 261 VGALSSALT 269

[Close]
BLAST of Bhi11G000768 vs. NCBI nr
Match: XP_004134268.1 (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis sativus] >KGN56311.1 hypothetical protein Csa_3G114510 [Cucumis sativus])

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-20
Identity = 58/69 (84.06%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKNS I VIGDGAMTA Q YEAMNN  YLDTNMIVILNDNKQVSLPT TLD PAT 
Sbjct: 196 DLLGKKNSVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATP 255

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 256 VGALSSALT 264

[Close]
BLAST of Bhi11G000768 vs. NCBI nr
Match: XP_008450188.1 (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis melo] >XP_008450189.1 PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis melo] >XP_016900855.1 PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-20
Identity = 58/69 (84.06%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKNS I VIGDGAMTA Q YEAMNN  YLDTNMIVILNDNKQVSLPT TLD PAT 
Sbjct: 196 DLLGKKNSVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATP 255

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 256 VGALSSALT 264

[Close]
BLAST of Bhi11G000768 vs. NCBI nr
Match: XP_022136584.1 (probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Momordica charantia])

HSP 1 Score: 106.7 bits (265), Expect = 3.2e-20
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKN+ I VIGDGAMTA Q YEAMNN  YLDTNMIVILNDNKQVSLPT TLD PAT 
Sbjct: 197 DLLGKKNNVISVIGDGAMTAGQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATP 256

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 257 VGALSSALT 265

[Close]
BLAST of Bhi11G000768 vs. NCBI nr
Match: XP_020257260.1 (probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X1 [Asparagus officinalis] >XP_020257261.1 probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X2 [Asparagus officinalis] >ONK75412.1 uncharacterized protein A4U43_C03F16580 [Asparagus officinalis])

HSP 1 Score: 103.2 bits (256), Expect = 3.6e-19
Identity = 55/69 (79.71%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKN  I VIGDGAMTA Q YEAMNN  YLD+N+IVILNDNKQVSLPT TLD PAT 
Sbjct: 194 DLLGKKNHVISVIGDGAMTAGQAYEAMNNAGYLDSNLIVILNDNKQVSLPTATLDGPATP 253

Query: 61  LEALSSALT 70
           + ALSSALT
Sbjct: 254 VGALSSALT 262

[Close]
BLAST of Bhi11G000768 vs. NCBI nr
Match: XP_015647944.1 (probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Oryza sativa Japonica Group] >Q6YU51.1 RecName: Full=Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic; Short=1-deoxyxylulose-5-phosphate synthase; Short=DXP synthase; Short=DXPS; Flags: Precursor >BAC84616.1 putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa Japonica Group] >BAD31023.1 putative 1-deoxyxylulose 5-phosphate synthase [Oryza sativa Japonica Group] >BAF21000.1 Os07g0190000 [Oryza sativa Japonica Group] >BAG94824.1 unnamed protein product [Oryza sativa Japonica Group] >EEE66718.1 hypothetical protein OsJ_23394 [Oryza sativa Japonica Group] >BAT00410.1 Os07g0190000 [Oryza sativa Japonica Group])

HSP 1 Score: 102.8 bits (255), Expect = 4.7e-19
Identity = 54/69 (78.26%), Postives = 58/69 (84.06%), Query Frame = 0 

Query: 1   DLLGKKNSFIYVIGDGAMTADQGYEAMNNTSYLDTNMIVILNDNKQVSLPTTTLDVPATL 60
           DLLGKKN  I VIGDGAMTA Q YEAMNN+ YLD+NMIV+LNDNKQVSLPT TLD PAT 
Sbjct: 198 DLLGKKNHVISVIGDGAMTAGQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATP 257

Query: 61  LEALSSALT 70
           + ALS ALT
Sbjct: 258 VGALSKALT 266

The following BLAST results are available for this feature:
BLAST of Bhi11G000768 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15560.15.1e-2071.01Deoxyxylulose-5-phosphate synthase[more]
AT3G21500.23.7e-1868.121-deoxy-D-xylulose 5-phosphate synthase 1[more]
AT5G11380.11.7e-0743.481-deoxy-D-xylulose 5-phosphate synthase 3[more]
BLAST of Bhi11G000768 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6YU51|DXS2_ORYSJ1.5e-2178.26Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativ... [more]
sp|O22567|DXS1_ORYSJ7.1e-1972.461-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. ... [more]
sp|Q38854|DXS_ARATH9.3e-1971.011-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|O78328|DXS_CAPAN4.6e-1869.57Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annu... [more]
sp|Q985Y3|DXS_RHILO1.9e-0857.691-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium japonicum (strain LMG 2... [more]
BLAST of Bhi11G000768 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BNQ5|A0A1S3BNQ5_CUCME9.6e-2184.06probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Cucumis mel... [more]
tr|A0A0A0L869|A0A0A0L869_CUCSA9.6e-2184.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G114510 PE=3 SV=1[more]
tr|A0A224X4B0|A0A224X4B0_HYPAN2.4e-1979.711-D-deoxyxylulose 5-phosphate synthase OS=Hypericum androsaemum OX=140968 PE=3 S... [more]
tr|A0A224XFS8|A0A224XFS8_9ROSI2.4e-1979.711-D-deoxyxylulose 5-phosphate synthase OS=Hypericum annulatum OX=708052 PE=3 SV=... [more]
tr|A0A224XGR2|A0A224XGR2_9ROSI2.4e-1979.711-D-deoxyxylulose 5-phosphate synthase OS=Hypericum kalmianum OX=473045 PE=3 SV=... [more]
BLAST of Bhi11G000768 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004134268.11.5e-2084.06PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cu... [more]
XP_008450188.11.5e-2084.06PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cu... [more]
XP_022136584.13.2e-2082.61probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Momordica cha... [more]
XP_020257260.13.6e-1979.71probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic isoform X1 [As... [more]
XP_015647944.14.7e-1978.26probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Oryza sativa ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00086611-deoxy-D-xylulose-5-phosphate synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0016114terpenoid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR029061THDP-binding
IPR005477Dxylulose-5-P_synthase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0052865 1-deoxy-D-xylulose 5-phosphate biosynthetic process
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0009228 thiamine biosynthetic process
cellular_component GO:0009507 chloroplast
molecular_function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000768Bhi11M000768mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.970coord: 1..68
e-value: 1.5E-9
score: 39.5
NoneNo IPR availablePANTHERPTHR43322:SF4SUBFAMILY NOT NAMEDcoord: 1..69
IPR005477Deoxyxylulose-5-phosphate synthasePFAMPF13292DXP_synthase_Ncoord: 3..51
e-value: 5.1E-14
score: 52.0
IPR005477Deoxyxylulose-5-phosphate synthasePANTHERPTHR43322FAMILY NOT NAMEDcoord: 1..69
IPR029061Thiamin diphosphate-binding foldSUPERFAMILYSSF52518Thiamin diphosphate-binding fold (THDP-binding)coord: 2..51

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G000768Cucumber (Gy14) v1cgywgoB503
Bhi11G000768Cucumber (Gy14) v2cgybwgoB229
Bhi11G000768Cucurbita maxima (Rimu)cmawgoB0411
Bhi11G000768Cucurbita maxima (Rimu)cmawgoB0815
Bhi11G000768Cucurbita moschata (Rifu)cmowgoB0407
Bhi11G000768Cucurbita moschata (Rifu)cmowgoB0811
Bhi11G000768Cucurbita pepo (Zucchini)cpewgoB0267
Bhi11G000768Cucurbita pepo (Zucchini)cpewgoB0478
Bhi11G000768Wild cucumber (PI 183967)cpiwgoB241
Bhi11G000768Cucumber (Chinese Long) v3cucwgoB244
Bhi11G000768Cucumber (Chinese Long) v2cuwgoB239
Bhi11G000768Bottle gourd (USVL1VR-Ls)lsiwgoB412
Bhi11G000768Melon (DHL92) v3.6.1medwgoB511
Bhi11G000768Melon (DHL92) v3.5.1mewgoB500
Bhi11G000768Watermelon (Charleston Gray)wcgwgoB098
Bhi11G000768Watermelon (97103) v2wgowmbB020
Bhi11G000768Watermelon (97103) v1wgowmB017
Bhi11G000768Silver-seed gourdcarwgoB1084
Bhi11G000768Silver-seed gourdcarwgoB1191